Osmerus eperlanus (European smelt): 134006725
Help
Entry
134006725 CDS
T10927
Symbol
itgb8
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-8
KO
K06591
integrin beta 8
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04510
Focal adhesion
oep04512
ECM-receptor interaction
oep04514
Cell adhesion molecules
oep04810
Regulation of actin cytoskeleton
oep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134006725 (itgb8)
04514 Cell adhesion molecules
134006725 (itgb8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134006725 (itgb8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134006725 (itgb8)
04810 Regulation of actin cytoskeleton
134006725 (itgb8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oep04147
]
134006725 (itgb8)
04515 Cell adhesion molecules [BR:
oep04515
]
134006725 (itgb8)
Exosome [BR:
oep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134006725 (itgb8)
Cell adhesion molecules [BR:
oep04515
]
Integrins
Integrin beta subunits
134006725 (itgb8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
PSI_integrin
EGF_2
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
Glyco_trans_2_3
Motif
Other DBs
NCBI-GeneID:
134006725
NCBI-ProteinID:
XP_062301691
LinkDB
All DBs
Position
20:10936432..10948903
Genome browser
AA seq
871 aa
AA seq
DB search
MPQSPWFSGAVFLFARSMLHDFLLDTVSRDRNLLQPVSYTGLILPLVLNMTSWLRKYCTL
PLHVVLSCVVILVAAFTPSSTAGSVCGSSLVSSCAACLRQGPHCAWCFQERFPDGAELSE
KCDLAVNLARRGCGYEFIEQPEVRVEVNATLSSTQVSPGEISITLRPGSEASFIVAVQQQ
ERYPVDLYYLVDVSASMQENLDQLKSVGVALSXRMTEHSSDLRLGFGSFVDKPVSPYINV
HPSKISNPCSDYEIRCRPAHGFHHVLSMTGNTSEFTRTIKRQRISGNMDTPEGGLDALLQ
ATVCQEEVGWRPEAKRLLLLMTDQPSHLALDSRLGGIVTPHDGRCHMEDNVYSESTTLDH
PSLGLIAEKLLENHIHSIFAIEKQQYQWYEELVRLLPGSYLGKLLFQAPNLIELVVDAYQ
RLLSEVEISVSVEDRXVSRFWVNVSPLCPNGSISSNNRSCSAVQPNQTVYFNITIGLLSC
PVSDDDDDDEEEDVLVMVRPVGYNETTTVRVRSLCRCRCGLAGRCRDDTHCKENSEQSDQ
DRYSDQTNQEQSREQDPGNPTGSELDPDSYPDQTWLCRAEGSEEDCSGRGVCVCGRCVCD
QSNLGTVHGKYCEMDDFSCPYQQGLLCGGRGVCVLGECVCAEGWAGEICGCPISTVTCLS
KDGSLCSGRGTCVCGKCMCDDLQFSGTFCERCPTCQSTCKSHWRCVDCHLSHGLTQEEVS
RCNHTCAPLVGYVDDVTGPRGEVWRQCVYTSPDSCRYRFQTGLVSGRTQLHISTNPECVP
GRRYMQMFVSVCVLTLLAGLVLVAVLWLLLQRKSWSPGGATDDEYNLTGKDLTFVPTSSE
KTVTYRRDCPSDRPVEMHIHVPKMPLGDPWS
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaagcccatggttttcgggggctgtttttttgttcgcgcgaagtatgttacac
gattttttgttggacaccgtcagtagagaccggaatctgctgcaaccggtgtcttacact
ggtcttattctgcccctggtgctgaatatgacttcctggctacgtaaatactgtaccctc
cctctgcatgttgtgctgtcctgcgtcgttatattggtcgctgccttcaccccaagttcc
acggccggtagtgtgtgtggttcttctcttgtgtcgtcatgtgcagcttgtctcagacag
ggaccgcactgtgcttggtgctttcaagagaggtttcctgatggggcggagctgagtgag
aagtgtgacctggcggttaacctggccagaagggggtgtggctacgagttcattgagcag
ccagaggtcagggtggaggtcaacgcgacgcttagcagcactcaggtgtcccctggggag
atcagcatcactctcagaccagggtctgaagctagtttcatagtagccgtgcagcagcag
gagaggtatcccgtggacctttactacctggtggacgtctcagcctccatgcaggagaac
ctggaccagctgaagtcagtgggcgtggccctgtccnatcgcatgacggagcactcttca
gacctgcgcttggggttcggctccttcgtggacaagcctgtatccccctacatcaacgtg
cacccgtccaagataagcaacccctgcagtgattatgagatccggtgtcggccggcccat
gggttccaccacgttctgagcatgacggggaacacgtcagagtttacacgcacaatcaaa
cgccagaggatctccgggaacatggacacacctgagggaggtctggacgccttgctgcag
gccactgtctgccaggaggaggtgggctggaggcccgaggcgaagcggctgctgttgctg
atgaccgaccagccgtctcacctggctctggacagcaggctggggggcatcgtaaccccg
cacgacggacgctgtcacatggaggacaacgtctactctgagagcaccaccctggaccac
cccagtcttggtctgatagctgagaagctactggagaaccacattcactccatcttcgcc
atagagaagcagcaatatcagtggtatgaggagttagtgaggctgctaccggggtcatat
ctggggaagttgctgttccaggcccctaacctgatagaactggtggtggatgcataccag
aggctgctgtcggaggtggagatttcggtttcagtggaggatcgangcgtcagcaggttt
tgggtcaacgtctctcctctctgtcccaatggatccatctccagcaacaaccgcagctgc
tctgcagtacagcccaaccagacagtctattttaacattaccatcggactgctctcctgt
ccggtcagtgacgacgatgatgatgatgaagaggaggatgtgttggtgatggtcagacct
gtgggttacaacgagaccaccacggtcagggttcgatctctgtgccgctgtcgctgcgga
ctggccggacgttgccgtgacgacacacactgcaaagagaactctgagcagagcgatcaa
gacagatactcagaccaaactaatcaagagcagagtcgggagcaggacccggggaacccg
acaggctccgagctggacccggactcctacccggatcagacctggctgtgcagggcggag
gggtcagaggaggattgcagcggccggggagtgtgtgtttgcgggaggtgtgtgtgtgac
cagagcaacctgggaacagtccatgggaagtactgtgagatggacgacttctcctgcccc
taccagcaggggttactgtgtggaggacggggtgtgtgcgtgttaggtgaatgtgtgtgc
gccgagggctgggcaggtgagatctgcgggtgtcccatttccacggtgacctgtttgtct
aaggatgggtcgctatgcagcggacggggcacatgtgtgtgtggcaaatgcatgtgcgat
gacctccaattctccggaaccttctgtgagaggtgccccacctgccagagcacctgtaaa
tcccactggaggtgtgtggactgtcacctgtctcatggtctcacacaggaagaggtgtca
cgctgcaaccacacctgtgccccattggtgggttatgttgatgacgtcacaggtccacgg
ggggaggtgtggagacagtgtgtttacactagccctgacagctgtcgctacaggttccag
acagggctggtgtctggcagaacacagctccacattagcacaaaccctgagtgtgtgcct
ggcaggcggtacatgcagatgttcgtgagtgtgtgtgtgttgacgctgcttgctggcctg
gtgctggtggcggtgctgtggttgctgctgcagagaaaatcctggtcaccagggggcgcc
actgacgatgaatacaacctcacagggaaggacttgacatttgtcccgacctccagtgag
aagactgtcacgtaccggagggactgcccatctgaccgccctgttgagatgcacatccat
gttcccaagatgccccttggtgacccctggagctaa
DBGET
integrated database retrieval system