Osmerus eperlanus (European smelt): 134006726
Help
Entry
134006726 CDS
T10927
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04080
Neuroactive ligand-receptor interaction
oep04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134006726 (thrb)
04081 Hormone signaling
134006726 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134006726 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oep03310
]
134006726 (thrb)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134006726 (thrb)
Nuclear receptors [BR:
oep03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
134006726 (thrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
134006726
NCBI-ProteinID:
XP_062301692
LinkDB
All DBs
Position
20:6364391..6408928
Genome browser
AA seq
415 aa
AA seq
DB search
MSDQADNCTQHWKHEVMQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYEGKCIIDKVTRNQCQECRFKKCIAVGMATDLVLDDGKRLAKRKLIEEN
RERRRKEELQKTVWDRLEPTQEEWDLIRMVTEAHMATNAQGNHWKQKRKFLVEEAMLLNE
ITCNLFYTSDQSAVGVKETKPEDIGQGPIINAPEGSKVDIEAFSQFTKIITPAITRVVDF
AKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGL
GVVSDAIFDLGVSLSSFNLDDSEVALLQAVILLSSDRPGLTSVERIERCQEEFLLAFEHY
INYRKHKVAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccaagcagacaattgcacccagcactggaaacatgaggtcatgcaaaatggg
tacataccgagttatctggacaaggatgagctttgtgtagtgtgtggagacaaagctaca
ggatatcactatcgctgtatcacctgtgaaggttgcaagggcttcttccgacggacaatc
cagaagaatctcaaccctacatatgcatgtaagtacgagggaaaatgcataatcgacaaa
gtgaccaggaaccagtgccaggaatgtcgcttcaagaagtgcattgcagttggcatggca
actgacttggtgctggatgacggtaagcggctggccaagcggaagctgatcgaggagaac
agggagcgtcgtcggaaagaggagctgcagaagacagtgtgggaccgccttgagcccacg
caggaggagtgggacctgattcgcatggtcactgaggcccacatggcaacaaatgcccag
ggcaaccactggaaacagaagcgaaaatttttggtcgaggaagcaatgctacttaatgaa
ataacatgtaatttattctatacctctgaccagagtgcagtgggggtgaaggaaactaag
ccagaggacattggtcaaggacccatcataaatgcacctgagggaagcaaagtggatata
gaagccttcagtcagtttactaaaattatcacccccgccatcacccgtgtggtggacttt
gccaaaaagctgcctatgttctgtgagctgccttgtgaagaccagatcatcctgttaaaa
ggctgttgcatggagatcatgtcgctgcgggccgccgtgcgctacgaccccgagagtgag
acgctcacactgaacggagaaatggccgtcacccgtggccagctgaagaacgggggactg
ggagtggtctcagatgccatctttgaccttggagtgtcactatcctccttcaatctggat
gactcggaggtggctcttctgcaagctgtcatcctcctgtcatccgatcggccaggtctg
acaagtgtggaacggatcgagcgctgtcaggaggagttcctcctggcttttgaacattac
atcaactaccgcaaacacaaggtggcccacttctggcccaagctgctgatgaaggtgaca
gacctgaggatgatcggagcatgccacgccagccgtttcctgcacatgaaggtggaatgt
cccaccgagttgttccctccactcttcctggaggtgtttgaggactga
DBGET
integrated database retrieval system
