Osmerus eperlanus (European smelt): 134006788
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Entry
134006788 CDS
T10927
Symbol
top2b
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oep03032
]
134006788 (top2b)
03036 Chromosome and associated proteins [BR:
oep03036
]
134006788 (top2b)
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
134006788 (top2b)
DNA replication proteins [BR:
oep03032
]
Eukaryotic type
DNA Topoisomerases
134006788 (top2b)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
134006788 (top2b)
Centrosome formation proteins
Centriole proteins
134006788 (top2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
134006788
NCBI-ProteinID:
XP_062301804
LinkDB
All DBs
Position
20:6264948..6280293
Genome browser
AA seq
1651 aa
AA seq
DB search
MSNGAAGSGGLTWVTLFEKNNAAKKEEANGRGEGGKSESSKKDSSKKISVERVYQKKTQL
EHILLRPDTYIGSVEPVTQQMWVFDEDVGMNQREITYVPGLYKIFDEILVNAADNKQRDK
NMSAIKITIDPESNTISIWNNGKGIPVVEHKDEKMYVPALIFGHLLTSSNYDDEEKKVTG
GRNGYGAKLCNIFSTKFSVETACKEYKHSFKQTWQNNMTKTADPKIKFFDGEDFTCVTFQ
PDLSKFKMDKLDKDIVALVTRRAYDIAGSCKGVKVMLNGKKLPVTGFRSYVDLYVKDKLD
ETGVALKVVNESVNERWEVCLTMSEKGFQQISFVNSIATTKGGRHIDYVVDQIVAKLIEV
VKKKNKAGVTVKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQTKSFGSKCPLSDKFIR
AATNCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAGGKHSSECTLILT
EGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEINNIIKIVGLQYKK
SYEDPESLRTLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHTFLEEFITPIVKV
SKNKQEFSFYSIPEFDEWKKQTDNFKTWHIKYYKGLGTSTSKEAKEYFADMEKHRIMFRY
MGNEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQRRLHGLPEQYLYGTQTRHLSYNDFIN
KELILFSNSDNERSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHG
EQALMMTIVNLAQNFVGSNNANILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLFPP
LDSSLLKFLYDDNQKVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDVREIVNNIYRML
SHQDPLPMLPSYKNFKGVIHELGQNQFMVSGEVSVLDKNTIEIIELPVRTWTQAYKESVL
EPMLQGTEKTPALITDYKEYHTDSTVKFVVRMSEEKLAQAEAAGLHKVFKLQSSLTCNSM
VLFDHMGCLKRYDSVQDILKEFFELRLQYYRLRKDWLVGSLGAEAAKLSNQARFVLEKIE
GRISIENKSKRELIRMLVQKGYESDPVVAWTKAQEKALEEDERDGNDSDSSVDSGSTTGP
NFNYILNMPLWCLSKEKVDELLKQRDHKKSELGDLQRKSPDDLWKGDLAVFVEELDRVEA
QEREDQSAGKGVKLVKGKVGKPKVKKMHLEETLPSPYGRRVEPTITQAMKADACKKMTNR
KKKGDSDLVVKMEFDDETAGLGAEGGTGENSLNSTTGLNSTTGLNSTTGLNSTTGPTKPK
VPRVKKEREKKEPGAPRAPRKPATPKGTPAKKVKKRNPWSEDESKSDSDIEDSEPVVIPR
DTKSQRASAAKPKYTFDFSEEEDEDADENGEDEAASSPVQSFKDSFAASEGTKSRYDDDD
EDEEEDVYPPPKHSTVTSISAGKKNKEADIFSAKSAFSEKSIDSDGPKFDSDEDGDGPIF
SSYSSSSAFDKPAPAKKAKKPSEAAPKPRKAPAPKAKKPDKSVWDSDSDTGSKKQSAPAL
KGKGRGRKRKPSGSGEDDYSPMKKAGKAPTSKVSKSKKAAPTRPAVSDEDDVDSFSLSDA
ASRDRSGRAKKEVKYFAESGDEDEDQYDMFD
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcgcagcaggaagcgggggtctgacttgggtgaccctctttgaaaagaac
aatgccgccaaaaaagaggaggccaacggcaggggcgagggtggcaagagtgagagcagc
aagaaggacagttccaagaagatatccgtggaacgggtgtaccagaagaagacccagctg
gagcacatcctgctccgtccagacacctacatcggctccgtggaacctgtcactcagcaa
atgtgggttttcgatgaagacgttggaatgaaccagcgggaaattacttatgtgcccgga
ttatacaaaatctttgatgaaatcctggtgaacgcggcagacaacaaacagcgggacaag
aacatgtctgccataaagattacaatcgatcctgagtccaacaccatctccatctggaac
aatggaaaaggaatccccgtggtggaacacaaggacgagaagatgtacgtccccgctctc
atcttcggacacctcctcacctccagcaactacgacgacgaggagaagaaggtcacaggt
gggaggaatgggtatggtgctaaactctgcaacatcttcagcacaaagttttcagtggaa
accgcctgtaaagagtacaaacacagcttcaagcagacttggcagaacaacatgaccaag
acagccgaccccaaaatcaagttctttgacggggaggatttcacttgcgtcacgttccag
ccagacctgtccaaattcaagatggacaagctggacaaagacatagtggccctggtcacc
cggagggcctacgacatcgccggctcctgcaagggcgtcaaggtcatgctcaatgggaag
aaactgcctgtgacggggttccgcagctacgtggacctgtatgtgaaggacaagctggac
gagacgggcgtggccctgaaggtggtcaacgagtctgtgaacgagcgctgggaggtgtgt
ctcaccatgagcgagaagggcttccagcagatcagcttcgtcaacagcatcgccaccacg
aagggtggccggcacattgactatgtggtggaccaaatcgttgccaagctgattgaagtg
gttaagaaaaagaacaaagctggagttacggtgaaacccttccaggtgaagaaccacatc
tgggtgtttgtgaacgcgctgatcgagaaccccaccttcgactcccagaccaaggagaac
atgaccctgcagaccaagagctttggctccaaatgtcccctgtccgacaagttcattagg
gcggctaccaactgtggaatagtggagagtatcttgaactgggtgaagtttaaggcccag
actcaactgaacaagaagtgctcctctgtgaagcacagcaagatcaaaggaatccccaaa
ctggatgacgccaatgatgctggtggtaaacactcgtctgagtgcacgctgatcctgaca
gagggggactcagccaagtctttggccgtctcgggcctgggcgtgattggacgagaccgc
tacggagtcttccccctcagaggaaagatcttgaacgtccgagaggccacccacaagcag
atcatggagaacgctgagatcaacaacatcatcaagatcgtggggctccagtacaagaag
agttacgaagacccagagtccctgaggacgctacgctacggcaagatcatgatcatgacc
gatcaggatcaagacggttcccatatcaaaggtctgctgatcaacttcttccaccacaac
tggccgtctctactgaagcacaccttcttggaggagttcatcacacccatcgtcaaggtg
agcaagaataagcaagagttctccttctacagtattcctgagtttgatgagtggaagaaa
cagacagacaacttcaaaacctggcatataaagtactacaaaggtttgggtacaagcaca
agcaaagaggccaaagagtactttgcagacatggagaagcatcggatcatgttcagatac
atggggaacgaggacgatgctgccatcacgctggccttcagtaagaagaagacggacgac
aggaaggagtggctgaccaacttcatggaggacaggcgtcagaggaggctgcacggcctg
cctgagcaatacctctatgggacccaaacaaggcacctatcctacaatgacttcatcaac
aaagagctgatcctcttctccaactccgacaacgagagatccatcccgtccttagttgac
gggctgaagccgggccagaggaaggtgctcttcacctgcctgaagaggaacgacaagagg
gaggtgaaggtggcccagctggccggctccgtggctgagatgtctgcctaccaccacgga
gagcaagccctgatgatgaccattgtgaacttggcgcagaacttcgtgggcagcaacaac
gccaacatcctgcagcctctgggccagtttgggacccgcatcaacgggggcaaggacgct
gccagccctcgttacatcttcaccatgctcagtcccttggccaagctgctgttcccgcct
ctggactccagcctgctgaagttcctgtacgatgacaaccagaaggtggagccagagtgg
tacattcccatcatccccatggtgctggtgaacggagccgagggcatcgggacaggctgg
gcctgtaagatcccaaactacgacgtgcgcgagatcgtcaacaacatctaccgcatgctc
agccaccaggaccccctgccaatgctccctagctataagaacttcaaaggcgttattcac
gagttgggccagaaccagttcatggtcagtggggaggtgtcggtcctggacaagaacacc
atcgagatcatcgagctcccagtccgcacctggacacaggcctataaggagtctgtcctg
gagcccatgctgcagggcacagagaagaccccagccctcatcaccgactacaaggagtac
cacaccgactccacagtcaagtttgtggtgcgcatgtctgaggagaagctggcccaggca
gaggcggccggcctccacaaggtcttcaagctgcagtccagcctcacctgcaactccatg
gtgttgttcgaccacatgggctgtctgaagaggtacgactccgtccaggacattctgaag
gagttctttgagctccggctgcagtactacagactcagaaaagactggctggtcggcagc
ctcggggccgaagcagccaaactgtccaatcaggcacgattcgttctggagaagatcgaa
ggaaggatttcaattgagaacaagtcgaaacgagagctgatcagaatgctggttcagaag
ggctacgagtcggacccggtggttgcctggactaaggcccaggaaaaggcgctggaggag
gacgagcgcgacgggaacgacagcgacagctcggtggactcgggctccacgacgggaccc
aacttcaactacatcctcaacatgcccctgtggtgcctgtccaaggagaaggtggacgag
ctcctcaagcagagggaccacaagaaatcggagctgggtgacctgcagaggaagtctccg
gacgacctgtggaagggcgacctggctgtgttcgtggaggagctggaccgcgtggaggcc
caggagcgagaggaccagagcgcagggaagggtgtgaagctggtgaagggcaaggtgggc
aagcccaaggtgaagaagatgcacctggaggagacgctgccctcgccctacggccgcagg
gtggagcccaccatcacccaggccatgaaggccgacgcctgcaagaagatgaccaaccgc
aagaagaagggtgactctgacctggtggtgaagatggagtttgatgatgagacggcaggc
ctgggagccgagggggggacgggggagaactccctcaactccaccaccggcctcaactcc
accaccggcctcaactccaccaccggcctcaactccaccaccggccccaccaagcccaag
gtcccacgcgtcaagaaggagagggagaagaaggagccaggtgccccccgagctcccagg
aaaccagcaacccccaaaggaacccctgccaagaaggtgaagaagcgcaacccctggtcc
gaggatgagtccaagtccgacagcgacatagaggatagtgagcccgtggtcattcccaga
gacaccaagtcccagagggcatcagccgccaagcccaagtacaccttcgacttctcggag
gaggaggacgaagacgcggacgagaacggggaggacgaggcggcctcctcgcccgtccag
tccttcaaggacagcttcgccgcgtccgaggggacaaagagtcgctacgacgacgacgac
gaggacgaagaggaggacgtctacccgcctcccaaacactccaccgtgacgtctatttct
gctgggaagaaaaataaggaggcagacatcttctccgccaaatcggcgttctctgaaaag
agcattgacagtgacggcccaaagtttgacagcgacgaggatggagacgggcccatcttc
tcctcctactccagcagctccgccttcgacaaacctgccccagctaagaaagccaagaag
ccatcagaggcagctcccaaacccaggaaagcaccggcgcccaaagcaaagaagcccgac
aagtctgtgtgggactctgactcagacacaggctccaagaagcaatctgcaccagcactc
aaaggaaaaggcagggggaggaagaggaagccgtctggctcaggggaggacgactacagt
ccgatgaagaaggctggcaaagcccccaccagcaaagtcagcaagtcgaagaaggcagcc
ccgacccggccggccgtgtcggacgaggacgacgtggacagcttcagcctgtcagacgcc
gcctccagagaccgctcgggccgcgccaagaaggaggtcaagtacttcgccgagtccggg
gacgaggacgaggaccagtacgacatgttcgactag
DBGET
integrated database retrieval system
