Osmerus eperlanus (European smelt): 134006952
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Entry
134006952 CDS
T10927
Symbol
grin2da
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
oep
Osmerus eperlanus (European smelt)
Pathway
oep04020
Calcium signaling pathway
oep04080
Neuroactive ligand-receptor interaction
oep04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
134006952 (grin2da)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134006952 (grin2da)
04082 Neuroactive ligand signaling
134006952 (grin2da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134006952 (grin2da)
Ion channels [BR:
oep04040
]
Ligand-gated channels
Glutamate (ionotropic)
134006952 (grin2da)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
134006952
NCBI-ProteinID:
XP_062302048
LinkDB
All DBs
Position
20:complement(7394898..7420244)
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AA seq
1820 aa
AA seq
DB search
MTPSGMANVIWLTVNESSPGSLLLQLCELLATTPLQGLVFEEEKPPPPNRAPLAPMLEFV
SAQTGVPVVAVGGGAGLGREQQETGSIYLQFSCSTALQLEVIFEVLEEYDWTSFAVVTTR
HHGYEEFLSMVEGMTDGSFIGWEKKGVVMLNVTDDPAGARTRRLLKDNEAQVRLLYCSQE
EAELIFKAAWAAGQAGPSHMWFAVGPALSGLSLEGLPKALFSIRPQGWRDEPPRRIAKGV
SVLTHGAMALRKDYGASRGPHYAGNCQTDGNQTQRVPDRIRYFSNITIGGRDYSFNSDGY
LANPLLEVISYSQGGGWEEVAWWENGVMRWRYTPTSRYGAFLKPLDDAQHLHVVTLEERP
FVIVEPADPGTGSCIRDSVPCRLPLNTSAVAEGISPMKNCCKGFCIDVLKRLAKIVSFSY
DLYLVTNGRHGKNIDGEWNGMVGEVVSSRADMAIGSLTINEERSSVVEFSVPFVETGISV
MVARSNGTVSPSAFLEPYSPAVWVMMFVMCLSVVAVTVFVFEFFSPVGYNRSLQNAKKTG
GSKFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQ
EEYIDTVSGLSDKKFQQPTEQYPPLRFGTVPNGSTEENIRSNYPNMHQFMIRNNQKGVEE
AIDNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGSGMVFATTGYGIALHKNSRWKRPL
DLALLQLVGDDEIDMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVF
AWEHLVYWKLRHCLAQSGGMDFLLAISRGMYSCCRFEDETSSGGIKSTLPQYHSVPCAMP
PPPPPYLVSSAVTNTTIAMVQQQHLQQQQQAYTSLLPGSPPHAGHSAMALGPSNSPLLEG
PMPCSTFLPRHDRRLAVVERWNRPPKPGTEKSMGGGGGHSDQGPYPQGMPPLWAGGASGG
GGGDGSLDEYKRYYGPIDPEGLGANTDPQTGGSQTPKMNPRGNKPPGMPRLPPKGLGPPS
HLLSKLPLALPSSPRRPSFWRRGSLPRRKSSGGPLYENILPLGRRGGGGRYGSRDGGNRR
GRRPPPLPLPVPVSSPTHTPTTPTTPSRLYTSSSSSSSSSSSSSSSSSSNSLSRSNSPSP
SSCSSATYSSSQSFRYRPGDRDPGDELDSDHLTEESSLLLGRRKGGRRSCSRMSSRSLPC
SPPPPPVPPRKPRLQRDYIRERAGSQLAQLQEWWASWGERERARGTERSRGEGREEKRHH
KERERERKRRKKGRKQKKREERERERERKRRKGKKKRKKEDKARRREKGRRSEQEEGDGE
KLQELKAITQDYSSYPGMRRESYRKKSESSTRSCGWDVPREEEKERDEGEDSRGTERHHG
RRSSKSYHTPSKPPSSVKFWRGGNPSSDTPPSAFLPLLPLSSKRRKSKGSDREALGREVE
KRPLLGRIDRGEVHSKQGLSFHEWESEEEVEDEESEEERRKAERAKRRGGRTASESERER
ERDKVVGVYSDEGSSGEFGKFERYWEGHEGRAVGGIGGGGWFFGTYPAREKAGSVNSRDY
LFLGRGEGWGTGEGSWGSAGGGGEAGREWASGSQWPPPPLTPPPPRRYWSVDKLHVQEEK
KGKRKSKDRGRGYAGCSCHSPLDHPHSHSKWARVTSRSQEELYQHCQSFGSSKSKRHASK
LDRAQDQAKSGSQTNLSIQRTQRADRSHQPSPPQALVPSLPPSLPPALPAPPSSSSSHPI
HVPPLTSSSSVSSPSVVSSTPGAPQPPSSSIASASAKLQYQRLRSVPQPQRFQSPHLPLK
GKSMCSRRGSAHFSSVESEV
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgtctggcatggctaatgtgatctggctgacggtgaacgagagcagccctggc
agcctcctcctgcagctgtgcgagctgctggccaccacacccctccaggggctggtgttt
gaggaggagaagcccccaccacccaacagggccccgctggcccccatgctggagtttgtg
tcggcccagacaggggtgcctgtggtggccgtgggaggcggagctggcctgggcagagaa
caacaggagactggctccatctatctccagttcagctgctccacagccctgcaactggag
gtcatctttgaggttctggaagagtacgactggacctctttcgccgtggtaaccacccgt
caccatggctatgaggaattcctatctatggtggagggcatgacggacggctcgttcatt
ggttgggagaagaagggcgttgtgatgctcaacgtgacggacgaccccgctggggctcga
acacgccgcttgctgaaggacaatgaggctcaggtgcgcctgctgtactgctctcaggag
gaggctgagttgatcttcaaagcagcctgggccgcgggccaggctgggccctcacacatg
tggttcgctgtggggcctgcgctgtccggcctgagccttgagggcttgcccaaggccctg
ttttccatccggccgcagggctggagggacgagccgccccggaggatagctaagggggtg
tcagttctgacccacggggccatggctctgaggaaggactacggtgcgtccagagggcca
cactacgcggggaactgccagacagacggcaaccagacgcagagagtgccagacaggatc
agatacttcagtaacataactattggtggacgggactactcgttcaacagtgatggctac
ctggccaatccgctactagaagtaatctcctattcccagggaggtggctgggaggaggtg
gcttggtgggagaacggcgtgatgaggtggcgctacacccccacctctcgctacggtgcc
ttcctcaagccgctggatgacgcccagcacctccacgtggtcaccctggaggagcgaccc
ttcgtcatcgtggagcccgccgaccccggcaccggctcctgcattcgcgactctgttccc
tgtcgcctgcccctcaacaccagtgcggtagcagagggtatttcccctatgaagaattgc
tgcaaaggattttgcattgacgtcctcaagcgattggccaaaatcgtgagcttcagctat
gacctctatctggtgaccaatggcagacacgggaagaacattgatggggagtggaacggc
atggtcggggaggtggtgtccagccgggctgacatggccatcggctcccttaccatcaac
gaggagcgctcatccgtcgtagagttctcagtgcccttcgtggagaccggcattagcgtc
atggtcgcacgaagcaatggcacggtgtcgccatccgctttccttgagccctacagccct
gcggtctgggtgatgatgttcgtcatgtgcctgtcggtggtcgccgtcaccgtcttcgtc
tttgagtttttcagtcccgtgggctacaaccgcagcctccagaacgccaagaaaaccgga
ggttctaagttcaccattggaaagtccatctggctgctgtgggccttggtcttcaacaac
tcggttcctgtggagaaccctcgaggaaccaccagtaagatcatggtgctggtgtgggcc
ttcttcgctgtcatcttcctggcctcctacactgccaacctggccgccttcatgatccag
gaggagtacatagacactgtgtctggactctccgacaagaagttccagcagcctacagag
cagtaccctcccctgcgcttcggcaccgtgcccaatgggagcacggaggagaacatccgc
tccaactatcccaacatgcaccagttcatgatccgcaacaaccagaagggagtggaggag
gccattgacaacctcaagactggtaaactggacgcgttcatctatgacgcggccgtgctg
aattacatggccaggaaggacgagggctgtaaggtgatgaccattggctccggcatggtg
tttgccaccacggggtacggcatcgctctgcacaagaactcccgctggaaacgccccctt
gacctggccctgctacagctggtgggagacgacgagattgacatgctggagcgcctgtgg
ctgtcaggtatctgtcacaacgacaagatcgaggtgatgagctctaagctggacatcgac
aacatggcgggggtcttctacatgttgctggtggccatgggcctcagcctgctggtgttc
gcctgggagcacctggtctactggaagctacgccactgcctggcccagtccggcggcatg
gacttcctcctcgcaatcagcaggggtatgtacagctgctgcaggtttgaggacgagacc
tcctctgggggcataaagtccaccctcccccagtaccacagcgtgccctgcgccatgccc
cccccgcccccaccatacctcgtctcctccgccgtcaccaacacaaccatcgccatggtt
cagcagcagcacctgcagcaacagcagcaggcctacaccagccttctccctggatctcct
ccccacgcagggcattcagccatggccttggggccttcaaacagccccttactggagggc
cccatgccctgctccaccttcctaccccggcacgaccgcaggctggctgtggtggagcgc
tggaacaggccccccaagcctggtacggagaagtctatgggtggaggtggggggcactca
gaccaggggccttacccccagggaatgccccctctttgggctgggggtgccagcggaggt
gggggcggggatggaagtctggatgaatataagcgctactacggtcccattgaccctgag
ggtctgggggccaacactgacccccagaccgggggttcccagacccccaagatgaacccg
aggggaaacaagccccctgggatgccaaggctgcccccaaaaggcttagggcctccttca
cacctgctttccaaactcccactagcactgccctcctccccccgccggccctccttctgg
cggaggggcagtctccccaggaggaagagctctggggggcctctatacgagaacatcctt
cccctcggaagacgaggcggagggggacgctatggatccagggacgggggcaacagacgg
gggcgccgccctccccctctccccttacccgtccctgtctcctcccccacacacaccccg
accacccccaccaccccctcccgcctctacacctcctcctcatcctcctcgtcctccagc
tcgtcctcctcctcgtcctcctcctccaactcgctctcccgctccaactccccgtctcct
tcctcctgctccagcgccacttactcctcgtctcagagtttccggtaccggcccggggac
cgggacccgggcgatgagttagactcggaccatctcaccgaggagtccagcctgctgctt
ggacgcaggaagggaggacgacgctcttgctctcgcatgtcgtcgcgctcgcttccctgc
agcccgccgccacctcccgtcccgccccgcaagccccgcctccagcgggattacatccgg
gaacgggcggggagccagctggctcagctgcaggagtggtgggcctcctggggggagaga
gagcgagcgaggggaaccgagaggagccggggggaggggagggaggagaagaggcaccac
aaggagagggagagggagcggaagaggaggaagaagggccggaagcagaaaaagcgggag
gagagggagcgagagagggagcgcaagcggcgcaaagggaagaagaagaggaaaaaagag
gacaaggcgaggaggcgggagaaggggaggaggtcggaacaggaggagggggacggagag
aagcttcaggagctgaaggcgataacacaggattattcctcgtatcccgggatgaggaga
gagtcgtacaggaagaagagcgagagctccacccgaagctgtggctgggatgtcccccgg
gaggaggagaaggagagggacgagggggaggacagcagagggacggagcgtcaccatggg
agaaggtccagtaagagctaccacacccccagtaaaccccccagctctgtcaagttctgg
aggggaggcaacccgtcctccgacacacctccctccgccttcctccccctccttcccctc
tcctccaaacggaggaagagtaagggttccgacagggaggcgctggggagggaggtggag
aagcgccccctgctgggcaggatcgaccgaggcgaggtgcactccaaacagggcctctct
ttccacgagtgggagtctgaagaagaagttgaggatgaagagtcggaggaggagaggagg
aaggcggagcgagccaagaggaggggaggtaggactgcttcggagtcggagcgcgagcgg
gaaagggataaggttgtgggcgtgtactcggacgagggatcctcgggcgagttcgggaag
ttcgagaggtactgggaggggcacgaggggcgggcagtggggggcatcggaggcgggggc
tggttctttggcacttatcctgccagagagaaggctggcagcgtcaatagcagagactac
ctgtttctagggcgtggcgaagggtgggggacaggggagggaagctgggggtcagccgga
gggggaggcgaagcagggagagagtgggcgtcgggctcacagtggcccccgcccccgttg
accccccctcctcctcggaggtactggtcggtggacaagcttcacgtccaggaggaaaag
aaaggcaaacgcaagagcaaggacagagggaggggctacgcaggctgttcctgccactcc
cccctggaccacccccactctcactccaagtgggcccgggtgacctcccgtagccaagag
gagctctatcaacactgtcagagcttcggcagcagcaagtccaagcgccacgcctccaaa
ctggaccgtgcacaggaccaggccaagtcgggaagccagaccaacctcagcatccagcgg
acgcagcgggccgaccgctcccaccagccctcccctccgcaggccctcgttccatccctc
ccgccctcgctcccccctgccctccctgccccgccctcctcatcttcctcccatcccatc
cacgtccctccgctgacttcctcctcctccgtctcctccccctcggtggtgtcctccacc
ccaggtgccccccagcccccctcctcctccatagcgtctgcctcggccaagctccagtac
cagagactgcgctcggtgccccagcctcagagattccagtcaccccacttgccactaaaa
ggcaagagcatgtgttcgcggagaggctcggctcacttttccagtgttgagagcgaagtg
tga
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