Osmerus eperlanus (European smelt): 134007020
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Entry
134007020 CDS
T10927
Symbol
atxn1a
Name
(RefSeq) ataxin-1a
KO
K23616
ataxin 1/1L
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
134007020 (atxn1a)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
134007020
NCBI-ProteinID:
XP_062302128
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Position
20:complement(3865359..3934013)
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AA seq
813 aa
AA seq
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MKSNQERSNECLPPKKRDLACTLPSEEQRPLATAPGCDGQRSENLAWFASVASGHNSRHE
GEGQRAGNSDGPLYKPLVPALTDASASSRAAVSSLSTIYTSPLSQHAAGGGGTIHYTHLP
SSLQFVSPPYAPAAHGPYAGYISSQLLPPPPPPPPFAPAPSSHRLPESPSYPSPALSSKM
DQPRSAGRAAPASESPGPQQYVQVSGSPLSVTPRTAPSSHGGPVPLHPHHALALSGQMLV
QYADGAPRKEEGLSRPRELLNGDLEKGARRFESGKLGSKGNSTSSSSSSSSSSPHFHQQS
THHYEARHIVLPSDFTTQDPSGLRTSLMLVPNSHAADDHPHHHSPHHLHHRPHHHAAGSP
DKLPGSGAHQEKGGIVLGKPVTRAPSSFTFPPPLSVESLKAAVGALSPHTVIQTTHNATE
ALSMGLPSTTFYPQPSIIGYIAGGGGGQQQPMGYHTGLGQHLLLPGAQPVIIPVSGGGVA
SLEAAGASATFPAHTYVASAPKGEPFEGAAPHFAHPAAVVQAQLHLPVVHAPPGLLATPP
AAAPPPSLPPYFVKGSIIQLADGELKRVEDLKTEDFIQSAEISSELKIDSSTVERIDGSP
TPNFAVVQFSVGEHRAQVSVEVLAEYPFFVFGQGWSSCCPDRTTQLLELPCTKLSVGDVC
ISLTLRNLRNGSLKKAQSLELHAQVTAACSPSHGQLKPLKSGGPRGGGAGGDGGCTRHRG
ERENGVSQQRSAGSGGVPVHTENGELRIGEKGLPPKGNPEAGAKPGGRKRRWSAPEGRKV
ERTEEEPPLTLPKPSFIPQEVKICIEGRSNIGK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaggagcgcagcaacgaatgtctgccgcccaagaaaagagacctggcc
tgcaccttgccctccgaggagcagcgccccctagcaacggcgcccggctgcgacggccag
cgcagcgagaacctggcctggttcgctagcgtggcgagcggacacaacagcaggcatgag
ggcgaagggcagcgagccggaaactcggacggccccctgtacaagccgctggtgccggcg
ctgacggacgcctcggcgtcgtcccgggcggccgtctcctcgctgtcgaccatctacacc
tccccgctctcccagcacgccgcgggagggggcgggaccatacactacacgcacctgccg
tccagcctgcagttcgtgtccccgccctacgcccccgcggcccacggcccgtacgccggc
tacatctcctcccagctcctccccccgccgccccctcccccgcccttcgcccccgcgccc
tcctcccacagactgcccgagtcgccctcgtacccctcccccgccctctcctccaagatg
gaccagccccgctcggccggccgggccgcccccgcgtccgagtccccgggcccccagcag
tacgtccaggtgtccggctcgcccctcagcgtgacgccgcgcaccgccccctcgtcccac
gggggtcccgtgcccctgcacccccaccacgcgctggccctgagcgggcagatgctagtg
cagtacgccgacggggcccccaggaaggaggaggggctctccagaccccgggagctgctc
aacggggatctggagaagggcgcccggcggtttgaatcgggcaagctcggaagcaaaggc
aactccacctcctcgtcctcgtcctcctcctcttcctccccccacttccaccagcagagc
acccatcactacgaggcacgacacatcgtcctgccctcggacttcaccacccaggatccc
tcagggctacggacctctctgatgctggtgcccaacagtcacgcggccgacgaccacccc
caccatcactccccccaccacctccaccaccgcccccatcaccacgccgccgggagcccc
gacaagctgcccggctccggcgcccaccaagagaaggggggcatcgtgctgggcaagccc
gtcacgcgggccccctcctccttcactttcccccctccgctgagcgtggagagcctgaag
gcggcggtgggcgcgctgtcgccccacaccgtcatccagaccacccacaacgccacggag
gccctctccatgggcctcccatccaccacgttctaccctcagccgtccatcatcggctac
atcgccggcgggggcggcggccagcagcagcccatgggctaccacaccggcctgggccag
cacctcctcctccccggcgcccagcccgtcatcatccccgtcagcggggggggggtggcc
agcctggaggcggcgggggcctccgccaccttccccgcccacacgtacgtcgcctccgcc
cccaagggcgagcccttcgagggcgccgccccgcacttcgcgcacccggcggcggtcgtc
caggcccagctccacctccccgtcgtccacgcccccccgggcctcctggccacgcctcct
gcggcggcccccccgccctcgctgcccccctacttcgtcaagggctccatcatccagctg
gcggacggggagctgaagcgggtggaggacctgaagacggaggacttcatccagagcgcc
gagatcagcagcgagctgaagatcgactcgtccaccgtggagcgcatcgacggcagcccc
acgcccaacttcgccgtcgtccagttctccgtcggggagcaccgcgctcaggtgagcgtg
gaggtcttggcggagtaccccttcttcgtgttcggccagggctggtcgtcgtgctgccct
gaccggaccacccagctcctggagctgccctgcaccaagctgtcggtgggcgacgtctgc
atctccctcaccctgcgcaacctgaggaacggctccctgaagaaggcccagtccctggag
ctccacgcccaggtcacggccgcctgcagccccagccacggacagctcaagcccctcaag
tccggaggccctcgtggtggaggtgctgggggtgacggtggttgtaccagacatcggggg
gagcgggagaacggggtcagccagcagaggtcggcggggagcggcggggttccagtccac
acggagaacggggaactgaggatcggggagaaggggctcccacccaaaggcaacccggag
gccggcgccaaaccaggggggcgtaagcggcggtggtcggcccccgagggccgcaaggtg
gagaggacggaggaggagccccccctgacactgcccaagccttccttcataccccaggag
gtcaagatctgcatcgaaggaaggtcaaacataggcaagtga
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