Osmerus eperlanus (European smelt): 134007353
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Entry
134007353 CDS
T10927
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134007353 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134007353 (dis3)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
134007353 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
134007353
NCBI-ProteinID:
XP_062302752
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All DBs
Position
21:complement(11022266..11030193)
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AA seq
949 aa
AA seq
DB search
MLKSKTFVRKTRSGGVMKIVREHYLRDDIWCGSEICTQCKQESTELQKDPCIESNLCSFP
HYLLPDTNVVLHQIDVLEDPLIRNVIVLQTVLQEVRHRSAPVYKRLKDILHEKEKHFYTF
TNEHHRETFIEREPGESANDRNDRAIRVAAQWYGGHLGKAPEGAGLKVVLLTNDRGNKEK
AEESGLLTFRCEEYIKSLIANPELVDRLALTNDDKNEISSSKVLFPEHLPLSRIQAGIKS
GTYIQGTFRASRDNYLEATVFVQGDEGESTEVLLQGLQNLNRAVYQDVVAVELLPREQWV
APSSVVLQDEGPKDEDAPEEEEKALRTTAGQMEARKPTGRVVGIIKRNWRPFCGMLNMSQ
IKESTRHLFTPADRRIPRIRIETRQAATLAGQRIMVSIDGWPKHSRYPNGHFVRSLGNAG
DKGTEMEVLLLEHDVPHQDFSQSVLSFLPQMPWAITQEDMQVREDLRELSVCSVDPPGCT
DIDDALHCRDLANGNLEVGVHIADVSHFIRPGNAMDKEAANRGTTVYLCGRRIDMVPELL
SSNLCSLRSNVERLAFSCIWEINDKAEILKTRFTKSVINSKASLTYAEAQMRIDDAHMND
DITKSLRGLNRLAKILKRQRIEKGALTLSSPEVRFHIDSETHDPIDLQAKELKETNSMVE
EFMLLANISVAQKIYEEFPECAVLRKHPAPPPSNYDILHRAAKSKELDIHTDSAKALADS
LDAAQVVGFPYFNTLLRILATRCMMQAVYFCSGLDGDFHHYGLASPIYTHFTSPIRRYSD
IIVHRLLAVAIGADSTYPDLMDKHKQSGLCNNLNYRHKMAQYAQRASVAFHTQLFFRNRG
ILNEEGFILFVRKNAIIILIPKFGLEGTVFFENKDKPGPKLSFQEEGPTLKVEDHTFNMF
DKVKVTISLDSSNIQHQKIRMSLIEPMIPGVSVPAPEVEPDAKKAKLDR
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagtctaaaacattcgttagaaagacccggtcgggtggggtgatgaagatagtg
cgagaacactacttaagagatgatatttggtgtggaagtgagatctgtacgcagtgtaag
caagaatcaactgagctgcagaaagacccgtgcattgaaagcaacttgtgttcgttccca
cattatttgcttccagacacaaatgttgtactacatcagatcgatgtcctggaggaccca
ttaatcaggaacgtgatcgttctccagactgtattacaggaggtacgacaccgaagcgca
cccgtctacaagaggctgaaagacatccttcacgagaaggagaaacatttctatacgttt
accaacgaacatcacagggagaccttcatagagcgagagccaggcgagagtgccaacgac
cgtaatgacagagcgatccgtgtggcagcccagtggtacggcgggcacctggggaaggcg
ccggagggggcgggtctgaaggtggtcctcctgaccaatgacagagggaataaggagaag
gcggaggagagtggcctgctaaccttcagatgtgaggagtacattaagagcctgatagcc
aacccagagcttgtggaccgtctcgccctgaccaacgacgacaagaatgagatcagcagc
agtaaagtgttgttcccggagcacctgcccctgtccaggatccaggcaggcatcaagagt
ggcacctacatccaggggaccttcagagccagcagggacaactacctggaggctactgtc
tttgtacagggggatgaaggagagagcacagaggttctcctccagggcctgcagaacctg
aaccgggccgtctaccaggacgtggttgctgtggaactgttgccacgggaacagtgggtg
gcgccgtcctcggtggtcctgcaggacgaggggccgaaggacgaagatgcccctgaggag
gaggagaaggcgctgaggaccacggcgggccagatggaagccaggaagcccacaggacgg
gtggtgggcatcatcaagaggaactggagacccttctgtggcatgctcaacatgtcccag
atcaaagagtcgacgcgccacctcttcaccccagccgacaggcgtatccccaggatccgc
attgagacgcgccaggcggccacgctggcggggcaaaggatcatggtctccatcgacggc
tggcccaaacactccagataccccaacggtcattttgtacgtagcctgggcaacgcagga
gacaagggcactgagatggaggtgctcctgctggagcatgatgtccctcaccaggacttc
tcccagtccgtgctcagcttcctgccccagatgccctgggccatcacgcaggaggacatg
caggtgcgtgaggacctgagagagctgagtgtctgcagcgtggatcctcccggctgcacc
gatatagatgacgccctgcactgtagagacctggccaacggtaacctggaggtgggtgtt
cacatcgcggacgtcagccacttcatccgccccggcaacgctatggataaggaggcagcc
aacagaggaaccacggtctatctgtgtggacggagaatcgacatggtccccgagctcctc
agctccaacttgtgctccctgcgctccaatgtggagaggctggctttctcctgtatctgg
gagattaacgacaaggctgagattctgaagacacgattcaccaagagtgtcataaactct
aaggcgtccctcacatacgcggaggcccagatgaggattgacgacgcccacatgaatgat
gacatcaccaagagcttgcgaggtctgaacagattggccaagatcctgaagagacagagg
atagagaaaggagcactgaccctatcctctccagaagttcgcttccatatcgacagcgag
acccacgaccccatcgacctgcaggcaaaggagctaaaagagaccaactccatggtggag
gagttcatgttgctagccaacatctccgtagcgcagaagatctatgaggagtttccggaa
tgtgctgtcctcaggaagcaccccgctcctccgccctccaactacgacatcctccacagg
gccgccaagtccaaggagctggacatccacacggactcggccaaggccctggccgactcc
ctggacgcggcccaggtggtgggcttcccctacttcaacaccctgctgaggatcttggcc
acgcgctgcatgatgcaggccgtctacttctgctcgggcctggacggggacttccaccac
tacggcctggcctcgcccatctacacgcacttcacctcgcctatcaggagatactcggac
atcatcgtgcatcgtctgttggcggtcgccattggagcagacagcacttacccagatctg
atggataagcacaagcagtctggcctgtgcaacaacctcaactaccgccacaagatggcg
cagtacgcccagagggcctcggtggcattccacacacagctgtttttccggaaccgaggc
atcctgaacgaggagggcttcatcctctttgtgagaaagaacgccatcatcatcctcatc
cccaagtttggtctggagggcacggtgttcttcgagaacaaggacaagcctggccccaag
ctgagcttccaagaggagggtcctactctgaaggtggaggatcacaccttcaacatgttt
gacaaggtgaaggtgaccatcagtctggactcctccaacatccagcaccagaagatccgg
atgtccctgattgagccgatgatccctggtgtgagtgttccagcacctgaagtggaaccc
gacgccaagaaggccaaattagaccgctga
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