Osmerus eperlanus (European smelt): 134007382
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Entry
134007382 CDS
T10927
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
KO
K11274
chromosome transmission fidelity protein 4
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134007382 (wdhd1)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
134007382 (wdhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Ctf4_C
WD40
WD40_Prp19
WD40_CDC20-Fz
HMG_WDHD1
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_TEP1_2nd
HMG_box
Beta-prop_Vps41
eIF2A
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_EDC4L
Beta-prop_Nup120_160
PROPPIN
Motif
Other DBs
NCBI-GeneID:
134007382
NCBI-ProteinID:
XP_062302788
LinkDB
All DBs
Position
21:1917081..1929289
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AA seq
1128 aa
AA seq
DB search
MPCERKPMRYGHSEGHTDVCFDDSGKFLVTCGSDGDVRIWESLEDDDPKSISVGEKAYSL
ALKRGKLVTAASNNTVQIHTFPDGDPDGILTRFTTHATHVCFNASGSRVAAGSSDFMVKV
VEVADSSQQKTFRGHDAPVLSVTFDPKDEFLASASCDGSVVVWNIEEQTQITSWPLLQKS
NDVSNAKSLCRLAWQPGSAKFLAVPVETKVLLYERDTWSHVSTLTDDLITQPINVVAWSQ
CGKFLAAGSVGGLLTVWDVETKLCLERQKHEKGFTVCGLAWHPSGNQLAYTDTEGCLGML
DGLSPSTAGTTKAMQAAPSEAKEYDDLFDDDDDDRVLDEGASDTRSPSKNARVAGAGEDE
DDDLMPATGRARNRAAFLEDDNSRDAGSLKLGVDAFAEDDDAGSTTAPLSAQAAPPRPLY
HGPMPTPPQKAFQPGSTPAHLMHRFMMWNSVGIVRGYNDDQDNAIDVEFHDTSVHHAIHL
TNSLGHSVVDLSQEAVLLACPGTEELASKLQCLHFASWDTNKEWLVDLPPGEDVRAVCLG
QGWAAAATSALLLRLFSIGGVQRELLCLPGPVVCMAAHGEQLLLAYHRGTGFDGEQALGV
QLLQLGLRKRRVIHGEPLPLSRRSHLSWLGFTAEGTPCYTDSEGVVRLLNRSLGNTWVPV
CNTRDSCKGKSDHYWVVGVHEHPQQLRCIPCKGSRFPPTLPRPAVAVLPFKLPLCQTATE
KGLMEEQYWRSALLHNHYDFLSSCGYEVDEEGQSQSQKEQQELLMKMFALSCKLDREVRC
VELAELMTQSVVTLAIRYASRSRRMALAQRLSELALEKANQLQGEEPEEEEEEQYSSARR
NSGRRQGEQSSSRHHSTRETQEEEEEEESQDGQMDTEEAAGNRRQGLNPFAKGATLSPEK
PSLNPVSKEGRVNPFKVSEAGKSPGLSGQPRVASILDSMSSSSRKPSPLLGSGGKQGRTT
VLKPLAPRAKTKTQSTLLHMTAPKAANKKSLEEREPAVDRLRKPEAPPPASPEENVENNK
PKTGFQLWLEENRKSIMAEHPDLEETGVIKEAMGRFRTLSADDRTSWTERAKGQCGEAVE
QKKRKREEEERRAEGNTQNEAEEEEGSAKKKKSSDPSAKLSAFAFNKN
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgccttgtgaaagaaagccgatgcgttatggccattccgagggacacactgatgtttgc
tttgacgacagtggaaagttcctcgtaacgtgtgggagtgatggagacgtgaggatctgg
gagagcctggaggacgacgatcccaagtccatcagcgtgggagagaaggcctactcccta
gcactgaagaggggtaagctggtgaccgcagcctccaacaacacggtccagatccacacc
ttccccgacggcgaccccgacgggattctgacccggttcaccacccacgccactcacgtc
tgcttcaacgcgagcggatccagagtggctgcgggctccagtgacttcatggtgaaggtt
gtggaggtggctgacagtagccagcagaagactttccggggccatgatgcacctgtgctg
agtgtgacctttgaccccaaggatgagttcctggcctcagccagttgtgatgggtctgtg
gtcgtgtggaacattgaggagcagactcagatcaccagctggcctttgctccagaagtcc
aatgacgtcagcaatgccaagtccctgtgtcgactggcctggcagcccggatcagccaag
tttctggccgttcccgtggaaaccaaagtgctgctatacgagagggacacctggtctcat
gtgagcaccctcaccgatgacctcatcacacagccaatcaacgtggttgcctggtcgcag
tgtgggaagttcttggcagctggcagtgtcggaggcttgctgacggtctgggacgtggag
accaagctgtgtttggagaggcagaagcatgagaagggcttcaccgtgtgtgggttggcc
tggcatccctccggcaaccagctagcgtacacggatacggagggttgcctgggcatgctg
gatggtctctccccctctaccgctggcaccacgaaagccatgcaggcggcgcccagcgag
gccaaggagtacgacgacctgtttgacgacgatgatgacgacagagtcctggacgaaggc
gccagcgacacgcgctctccttccaagaacgctcgcgtcgctggggccggcgaggacgag
gatgacgacctcatgcccgccacggggcgcgcgcggaaccgcgctgcgttcctggaggac
gacaactctcgagatgctggctctctgaagctgggtgtggatgcgtttgcagaggatgat
gatgctgggagcaccacagcgcccctctcagcccaggccgcgccccccaggccgctgtac
cacgggcccatgcccaccccgccccagaaggccttccagcctggctccacccctgcacac
ctcatgcaccgcttcatgatgtggaactcggtggggatcgtgcgcggctacaacgacgac
caggacaacgccatcgacgtggagttccacgacacgtccgtccaccacgccatccacctg
actaactccctgggccacagcgtggtggacctgtcccaggaggccgtgctgctggcctgc
cccggcactgaggagctggccagtaagctccagtgcctgcactttgcgtcgtgggacacc
aacaaagagtggctggtggaccttcctccgggtgaggatgtgcgtgcggtgtgcctgggg
cagggctgggcggcggcagccaccagcgccctgctgctccgcctcttctccatcgggggc
gtccagagggagctgctctgcctgccggggcccgtggtctgcatggcggcccatggggaa
cagctgctgctagcataccacagaggtaccggcttcgacggagagcaggcgttgggggtg
cagctgcttcagttgggcctcaggaagagacgggtcatacatggagagccactcccactc
tccaggaggtctcacctgtcctggctcggcttcaccgccgagggaacgccgtgttacact
gactctgagggcgtggtgcgcctgctcaatcgctccctggggaacacctgggtccccgtg
tgcaacacccgggacagctgcaagggcaagtcggaccactactgggtggtgggcgtgcat
gaacacccccagcagctccggtgtatcccttgtaagggatccaggttccctcccacgctc
ccccggccggctgtggccgtcctgcccttcaagctgcccctgtgtcagaccgccacagag
aaggggctgatggaagagcagtactggcgctcggcgctcctacacaaccactatgacttc
ctgtcgtcctgcggctatgaggtggacgaggagggccagagccagtcccagaaggaacag
caggaactcctcatgaagatgtttgctctgtcctgtaagctggaccgtgaggtccgctgc
gtggagcttgctgagctcatgacccagagcgtggtgacgctcgccatccgctacgcctcg
cgttcccgacgcatggccctggcccagcgcctcagcgagctcgccctggagaaggccaat
cagctgcagggggaggagccagaggaagaagaggaggagcagtacagcagcgccaggagg
aattctggtcgcaggcagggtgagcagagttctagccgccaccacagcaccagagaaacc
caggaggaggaggaggaggaggagagtcaggatggacagatggacacagaggaagctgca
gggaacaggaggcagggtctgaatccattcgccaaaggagcgactttatcccccgagaaa
cccagtctgaatcctgtgagcaaggaaggtcgagtgaatcccttcaaggtgtcggaggcg
ggtaagtccccgggtttgtcgggtcagcccagggtcgccagcatcctggacagcatgagc
tcatccagcaggaagccctctcctctcctgggctctggagggaagcagggcaggaccact
gtcctcaaacctctggcacccagagccaagaccaagacccagtcgacactgctacatatg
acagcccccaaagcagccaataagaagtcgttggaggagagggagccggctgtggatagg
ctgagaaagccagaagctccgcctccggcctccccagaagagaatgtggagaataacaag
ccgaagacaggcttccagctgtggctggaggagaacaggaagagcatcatggcagagcat
cctgacctggaggagactggggtcatcaaggaggccatggggcgcttcaggaccctgtct
gctgacgaccgcacgtcctggacagagagagccaaaggtcagtgtggtgaagctgtagag
cagaagaaaaggaaacgagaggaggaggagagacgggcagaggggaacacgcagaacgag
gcagaggaggaggagggcagcgctaagaagaagaagtcctcagatccctcagccaagctg
tcggcgttcgctttcaacaaaaactag
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