Osmerus eperlanus (European smelt): 134007538
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Entry
134007538 CDS
T10927
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oep00535
]
134007538 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oep00537
]
134007538 (gpc6a)
Proteoglycans [BR:
oep00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
134007538 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oep00537
]
Others
134007538 (gpc6a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Serglycin
Toxin_33
Motif
Other DBs
NCBI-GeneID:
134007538
NCBI-ProteinID:
XP_062303034
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Position
21:6986348..7062971
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AA seq
568 aa
AA seq
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MCAMWGVQVVFCTFSVLSFSFGGDSKARSCSEVRQAYTAKGFSLVNVPHQEISGEHLRVC
PQEYTCCTSEMEDKLGQQSKLEFENLVEETSHTLRTTFVSRHKKFDEFFLELLDNSEKSL
NDMFTRTYGKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQY
HFSDDYLECISKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLMVGREVANRVAKVNV
ASACIRALTKMLYCPYCGGMPGLKPCHNYCHNVMRGCLANQADLDSEWNLFINAMLLVAD
RLEGPFNIEAVMEPIDLKISEAIMTMQDNSMQVSAKVFQGCGQPKPSGMGRSARGISDVF
NARFRPYSPEERPTTAAGTSLDRLRIVWRTMQHSVIDIKEKLEKSKKFWSNLPDDICKKD
KVTESDEDQCWNSHAKARYFPEVVKEGLTNQLNNPEVEVDITRPDTLIRQQIMALRVMTN
KLKNAYNGFDIYFQDSSDEGSGSGSGSGCTDGCTTEFVFVGTEAPVVGADRSDERAAAAG
RGQSHGPSPLLLAASLALTLLAWHRQWR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcgatgtggggggtgcaagtggtcttttgcacgttctccgtgctgtccttttca
tttggaggtgatagcaaagcacggagctgcagtgaggttagacaagcatacaccgcgaaa
gggttcagtcttgtcaatgttccccaccaagaaatatcaggtgaacacctgcgagtgtgt
ccccaggagtacacctgctgcacatctgagatggaggacaaactcggccaacagagcaag
ctggagtttgagaacttagtggaggagacgagccacacactgaggacgaccttcgtctca
agacataaaaaatttgacgagtttttcctggagctgttggacaactcggagaagtccctc
aatgacatgttcacgcgaacgtacgggaagctctatatgcagaactccgaggtgttccag
gaccttttcacagagctcaaacgctactacactggagggaacgtcaacctggaagagatg
ctcaacgacttttggtctcgcctgctggagcgcatgttccagctgctcaactcccagtac
cacttctcagacgactacctggagtgcatcagcaaatacacagaccagctcaagcccttc
ggagacgtccccaggaagctcaaggcccaggtcaccagggccttcatagctgcccggacc
tttgtccagggcctcatggtgggccgtgaggtggctaacagggtagccaaggtaaatgtt
gcctccgcctgcatccgggcattgaccaagatgctgtactgcccgtactgtggaggcatg
cctgggttgaagccctgccacaactactgccataatgtgatgaggggctgtctggccaac
caggccgacctggactctgaatggaacctgttcataaatgccatgttgttggtagcagac
aggctggagggaccctttaacattgaggcggtcatggagccaatcgatctcaagatctca
gaggccatcatgaccatgcaagataacagcatgcaggtttcagccaaggttttccaagga
tgcggtcagccgaaaccttccggaatgggcaggtctgcccgtggcatctcagacgtgttc
aatgcccgcttcagaccctacagtcctgaggagaggcccaccacagctgcaggcaccagc
ctggacagactgaggatagtgtggaggacaatgcaacacagcgtcattgacatcaaagag
aagctggagaagtcaaagaagttctggtccaacttgccagatgacatttgtaagaaggac
aaggtgacagagtcagacgaggaccagtgctggaacagtcatgccaaggccaggtacttt
cctgaggtggtgaaggagggcctgaccaaccagctgaacaatccagaggtggaggtggac
atcacccgcccagacacgctcatccgtcagcagatcatggccctccgagtgatgaccaac
aagctcaagaatgcctacaacggcttcgacatctactttcaggactccagtgacgagggc
agtggttcgggcagtgggagcgggtgcacggacggctgcacaacagagtttgtcttcgtg
ggcacggaggcgcccgtggtgggggcagacaggagtgatgaacgagccgcagcagcgggc
agaggacagagccacggaccgtccccgctgcttctagcagcttccctcgccctcacactt
ctggcatggcacaggcaatggagataa
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