Osmerus eperlanus (European smelt): 134007550
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Entry
134007550 CDS
T10927
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134007550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134007550
Enzymes [BR:
oep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134007550
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134007550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
Ig_DSCAM-DSCAML_C
PRY
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
134007550
NCBI-ProteinID:
XP_062303054
LinkDB
All DBs
Position
21:complement(8385017..8409116)
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AA seq
678 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCASNEPVQSIGAFQCPTCR
YVISLSPQRGLEGLKRNVTLQNIIDRVQRAASSGCPLPHSGPNSPSEDNRLALVPAAMTS
PGTPPEPIQCQFCEQDPPQDAVKTCVTCEVSYCDECLRATHPNKKPFTGHRLIEPMPDTH
LRGLQCLEHEEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRYEKLKQALDSNLSN
LIKRNNELESLMGKLIQTCQHVEVNACRQEGKLMEECDLLIDIIQQRRQLIGTKIKEGKV
VRLRKLAQQISNCKQCIDRSSSLITQADQTLKETDHARFLQSAKGITERVSMATASSQVL
IPEINLTDTFDTFALDFTREKKLLENLDYLTAPSPPGIREELCTASYDTITVHWTSDDEF
SVVSYELQYAIFTGLANVVSLCNSLDSWMIVPNIKQNHYTVHGLQSGTKYIFVVKAINQA
GSRSSEPGTLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDESTSKKGHSQDRFTSQSSYG
VIANVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRCNNSWVVRHN
SKEMAIEPSPHLRRVGVLLDYDMGTLAFYDAVGSQHLHTFRVSFAQPVCPVFNVWNKCLT
VLTGLPIPDHLEGLEPQD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggacacgctggagtcagagctgacttgcccaatctgcctcgagctctttgaggaccca
ctgctgctcccctgcgcccacagcctgtgcttcggctgtgcccatcgcatcctggtctct
cactgtgcctccaacgagcccgttcagtccatcggagccttccagtgccccacctgccgc
tatgtcatctcactgagccctcagcgcggcctagaaggactgaaacgcaacgtcaccctc
cagaacatcatcgaccgcgtccagagggccgcctcctccggctgcccactgccccacagc
gggccaaactcccccagcgaggacaatcgactcgccttggtgcccgccgccatgaccagc
cctggaacgccgcccgagcccatccagtgccagttctgtgagcaggaccccccgcaggac
gccgtcaagacgtgcgtcacatgcgaggtgtcgtactgcgacgagtgcctgcgcgccaca
caccccaacaagaagcccttcacgggccatcgcctgatcgagccgatgccagacacgcac
ctgcgaggcctgcagtgcctggaacacgaggaggagaaggtcaacatgtactgcgtcacc
gacgatcagctcatctgctccttgtgcaagctggtgggccgacatcgggaccaccaggtc
gcagctttgagcgaccgctacgagaaactcaagcaagcgttggactccaacctgagcaat
ttgattaaaaggaacaacgagctggagtctctgatggggaagctgattcagacatgccag
cacgtcgaggtcaatgcgtgcagacaggaaggcaagctgatggaggagtgtgatcttctg
attgacatcatacaacaaagaaggcaactcattggcaccaagatcaaggaaggaaaggtg
gtgagactacggaaactggcccagcagatctccaactgtaagcagtgcatcgacaggtct
tcttccctcatcacccaggctgaccagaccctgaaggagaccgaccatgctcgcttcctc
cagagcgccaagggcatcacagagagggtctccatggcgacggcctcttctcaggtcttg
atcccagagatcaatttgacggacacgtttgatacgtttgccctggacttcacccgggag
aagaaactattggagaacctggactacctaaccgctccgagtcccccaggcatcagggaa
gagctgtgcacagcctcatacgacaccataactgtccactggacgtccgacgatgagttc
agcgttgtgtcctacgagctccagtacgccatcttcacaggcctggccaacgttgtcagc
ctgtgcaactcgttggacagctggatgatcgtgcccaacataaaacagaaccactatacc
gtgcacggcctgcagagtggcactaagtacatatttgtggtcaaggccatcaatcaggct
ggcagccgtagcagcgagcctgggacactgaagaccaacagccagcccttcaagctcgat
cccaagtctgcccacaggaagctgaaggtttcccacgacaacctgacggtggaacgtgac
gagagcacgtccaagaagggccacagccaggaccgcttcaccagtcagagcagctatggc
gtcatcgccaacgtctacatcgacagcggacgccattactgggaggccctcattggagga
agcacgtggtacgcggtggggatcgcctacaagtcggcccccaagcacgagtggatcggg
aagaactccgcttcctgggtcctctgccgctgcaacaactcctgggtggtccgccacaac
agcaaggagatggccatcgagccctccccccacctgcggcgcgttggggtcctgctggac
tacgacatgggaaccctggccttctacgacgcggtgggctcccagcacctccacaccttc
cgggtgtccttcgcccagccggtgtgccccgtcttcaacgtgtggaacaagtgtctgacg
gtcctcactggcctgcccatcccagaccacctggaaggcctggagccccaagactga
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