Osmerus eperlanus (European smelt): 134007567
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Entry
134007567 CDS
T10927
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134007567
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
134007567
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
134007567
NCBI-ProteinID:
XP_062303097
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Position
21:complement(9701862..9713522)
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AA seq
917 aa
AA seq
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MGLKDHVEDGAGRILDLGLDLEYLHVEGANRQAGVEAGPGMEKGEEEEEEEGGGSSGSST
PSGEVEESAGSESEPDPAPPAPSTTNPHQPLCRASCVDLGCEGPPEPPPEQPGAGLKEYQ
TKLEFALKLGYAEDTVRLVLTKLGPGTLINDILGELVKLGSKPDSEQPPASKPTSSCSST
SSSSSTCGLSESLEARGTESPCPADPLGDKDNLRPVVLDGSNVAMSHGNKEVFSCHGIQL
AVDWFLDRGHRDITVFVPAWRKEQSRPDALITDQEILRRLEKEKILVFTPSRRVQGRRVV
CYDDRFIVKLAHESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLG
RHGPSLENFLRKRPIMPEHKKQPCPYGKKCTYGHKCKYYHPERGAQPQRSVADELRASAK
TTSASKGQGEGLVKSHSVPVGADGAAGDKTGASKRQSDPSVRALSYSEAEDKLLGRGEGR
KNSLCGSSTGSSCSGSVVLSPAPGGPPSGLGCYAQEQPPRADTPQRVPPSPHPDLYPSAE
PPDLSYYSVMRAYSGLGLASRHIPDRRFPGDADPRRGSAASDCGSESGVSCGSGYESYGE
RACPACPDALLDGDGPPYGGHHHHHQHHHHHHHSRLYAHPNAPPAEPRRLHPPDYPPGPT
LHSYHQSLARGHSYTHDDPPDPCLKRPLYPLPPHLQHQTVGARSSCPGDYPSLAPTSLHP
PGSPLARCLASTRVESVSDSRLYEHPLAPPPSLSHHQKPFSSWDPQYRQPPAPRYDPPSC
QSLPESRQSGWHGSTSAWGWDRYTQAPPPPPPPAYPHYPPYHSSTPLPSHTPHLPHPSHM
PPPSHTPHPPPHPLRPPLHQEPPSLSRLDEAREKVYVDLCNIFPSELVGMVMGRSPHLID
PQQLAAAILAEKAQCGY
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgggcctaaaagaccatgtggaggatggagcaggccgcatccttgacctggggctggat
ttggagtacctccacgtagaaggggccaaccgtcaggctggcgtggaggcagggcccggt
atggagaaaggagaggaggaggaggaggaggagggtggtggctccagtggtagctctact
ccgtctggggaggtggaggagagtgctggctctgagagcgagcccgacccagccccgccc
gcgcccagcaccaccaaccctcaccagcctctctgccgggcctcctgtgtggacctgggc
tgtgaggggcccccggagccccccccggagcagccaggggccgggctgaaggagtaccag
accaagctggagtttgctttgaagctgggctacgcggaggacacagtccgcctggttctc
accaagctgggcccgggcacgctcatcaacgacatactgggcgagctggtcaaactgggc
agcaagccagacagcgaacaacctccagcctccaaacccacctcctcctgctcctccacc
tcctcctcctcctccacctgtggcctgtccgagtcgctggaggcccgagggaccgagtcc
ccctgtcctgcagaccccctgggggacaaagacaacctgaggcctgttgttctcgatggc
agcaacgtggccatgagtcatggtaataaggaggtgttctcctgccatgggatccagctg
gctgttgattggttcttggatcgaggtcatcgtgacatcaccgtgtttgtgcccgcatgg
aggaaagagcagtcccgccctgatgcacttattacagaccaggagatcctgcgtcgcctg
gagaaggagaagatcctggtgttcacgccgtcgcgccgcgtccagggccgccgggtggtc
tgctacgacgaccgcttcatcgtcaagctggcccacgagtcggacggcatcatcgtctcc
aacgacaactaccgcgacctggccaacgagaagcccgagtggaagaagttcatcgacgag
cgcctgctcatgtactcgttcgtcaacgacaagttcatgccccctgatgacccgctgggg
cgtcacggccccagcctggagaacttcctcaggaagagacccatcatgcctgagcataag
aagcagccctgcccttacggtaagaagtgcacatacggccacaagtgtaagtactaccac
ccagaacgtggagcccagccccagcgctcggtggcggacgagctccgggccagcgccaag
acgacctcggccagcaagggccagggcgagggcctggtgaagagccacagcgtgccggtg
ggcgccgacggggcggcgggcgacaagaccggggcctccaagaggcagtcggaccccagc
gtcagggccctgtcgtacagcgaggccgaggacaagctgctgggccggggcgagggccgc
aagaacagcctgtgtggcagcagcaccggcagcagctgtagcgggagcgttgtcctctcc
ccggctcctggaggcccgccctccgggctgggctgctacgcccaggagcagccccccaga
gcggacacgccgcagcgggttcccccttccccccacccggacctctaccccagcgccgag
cccccggacctcagctactactccgtgatgcgggcctactccggcctcggcctggcgtcg
cgccacatccccgaccgccgtttccctggcgacgcggacccgcgccggggctcggcggcg
tcggactgcggcagcgagagcggcgtgagctgcgggagtggctacgagtcgtacggcgag
agggcgtgtccggcctgtcccgacgccttattggacggcgacggcccgccgtacggcggc
caccatcaccaccaccagcatcaccaccaccaccaccacagccgtctgtacgctcatccc
aacgcgccgccggccgagccgcgacgcctccacccccctgactacccccccggccccacc
ctccacagctaccaccagagcctggcgcgcgggcacagctacacccacgacgaccctccc
gacccctgcctgaagcgccctctgtaccccctccccccccacctgcagcaccagactgtg
ggggcccgctccagctgcccgggagactacccctccctggccccgaccagcctccaccct
cctgggtcgcccctggcccgctgcctggcctccacacgggtggagagcgtgtcggactcc
cgcttgtacgagcaccccctcgccccacccccctctctctcgcaccaccagaagcctttc
tccagctgggacccccagtaccgccaaccccctgccccccggtatgacccccccagctgc
cagagcctaccagagagccgtcagtcaggctggcacggctccacgtctgcctgggggtgg
gatagatacacccaggcccctcctcctcctccccccccagcatacccccactaccctcct
taccactccagtacgcctctcccctctcacacgcctcacctaccccacccctcacacatg
ccccccccctcccacacgccgcacccccctccccaccccctccggccccccctgcaccag
gagcccccctccctcagccggctggacgaggccagggagaaggtgtacgtcgacctgtgt
aacatcttcccctcagagctggttggcatggtgatgggcaggagcccccacctcatagac
ccccagcagctagcagccgccatcctggcagagaaggcccagtgtggctactag
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