Osmerus eperlanus (European smelt): 134007746
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Entry
134007746 CDS
T10927
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oep01002
]
134007746
Peptidases and inhibitors [BR:
oep01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
134007746
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
134007746
NCBI-ProteinID:
XP_062303386
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Position
21:6545802..6563213
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AA seq
1222 aa
AA seq
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MVLMSPSLLWLLMLCGLQSIWAQDYDEDYEEEEVDTRTKSKLLTTNTISKNGQSLLDEDC
SLELAFLVDSSESAKENHAKEKRFASDVMDRLQGLRLQTGRGLNSRAALLQYSSHVIIEQ
TFKQWRGTADFKARVAPIAYIGHGTYTTYAITNLTRIYLEESGPASIKVAILMTDGISHP
RNPDIFAAVADAKNQGVRFFTVGITPDANQESNVAQLRLIANSPASRYLHNLQDKTIVDK
VIKEITALADEGCPLEKKCACEKGERGPGGPAGKKGRPGEDGSPGGKGQKGEAGLSGIPG
REGSEGKPGYKGDTGERGECGTPGIKGDRGPEGPVGTRGIRGLQGLPGPNGDIGPEGPTG
KKGERGIPGPSGIQGETGIGLPGPKGDVGFQGRHGPPGPPGLGEPGLPGPQGPQGVQGEK
GPIGEGFPGPKGERGLDGQRGTRGMPGSGIKGDKGDFGPPGFPGPSGLTGAGIQGEKGVE
GPRGPPGIRGPQGEGFPGSKGDQGLPGEVGATGDRGAGEPGPKGEPGSSGLSGFPGLPGE
DGAPGQKGEPGAFGQRGPDGAPGIGTQGEKGDQGQRGIRGLAGPPGIAGPSGAKGEPGTP
GRLGLPGFPGRGILGPKGDSGPPGPSGPVGETGYGLPGPKGDRGDLGPSGPFGPKGEGYP
GPTGPPGLPGLTGEPGLEGLGIPGPKGDVGFRGLPGLPGPPGEGLQGPPGTIGRPGPPGP
TGPAGQGLQGPKGEQGSQGVTGPRGLQGEGFPGVKGDRGSGGERGLKGVKGDMGDPGVSG
EAGRQGVKGEAGLTREDIIRMIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIKDF
VTALVDRVTVGRNATRIGLVLYSLEVKLEFNLARHINKQDVKQAIRNIPYMGEGTYTGTA
IRKATQEAFFSSRTGVSKVAIVITDGQTDKREPVKLDIAVREAHAANIEMYALGIVNTSD
ITQVEFLRELNLIASDPDEEHMFLIDDFNTPPALESKLVSQFCEDERGELIYNRITNGYG
NNGYKNNLNGKYSTGSYGYETTNQGGIQTGQRTVNSVGSGGQSYGGREGTSQTINSATDQ
IGQRERGHDGGVATSDLETGGRDTYNLNTSSSSRPGIPSRETLSSNTGGSSSTSTSSSSS
GTVQYVPAPRPALPQEFVPLDPRCALILDQGPCRDYNIRWYYDKQANACAQFWYGGCEGN
KNRFDTEEECKRMCVLARATGT
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatgtctccctcgttgctctggcttctgatgctgtgtgggcttcagagtatc
tgggctcaggactatgatgaagactatgaggaggaggaggtggacaccagaaccaagagc
aaactactgacaaccaacaccatctccaaaaatggacagtctcttctggacgaggactgc
agcctggagctggccttcctggtggacagctcagagagtgccaaggaaaaccacgccaag
gagaagcgcttcgcctccgacgtgatggaccgcctgcagggtctccgtctgcagactggg
cgtggtttgaactccagggctgccctcctgcagtacagcagccacgtcatcatcgaacag
accttcaagcagtggaggggcacggcggattttaaggcccgcgtcgcgcctatcgcctat
atcggccatggcacctacaccacctatgccatcaccaacctcacccggatctacctggag
gagtcgggaccagcgagcatcaaggtggccattctgatgactgacggcatctcacatccc
agaaacccggatatctttgcggccgtggcggacgccaagaaccagggcgtccgcttcttt
acagtgggaatcactccagacgccaaccaggagtccaatgtagcccagctgagactcatc
gccaactcccccgcctcgcgctatctccataacctgcaggacaagaccattgtggacaag
gtcatcaaagaaattacggcgttggcagatgaagggtgtcccttggaaaagaagtgtgcg
tgtgagaagggagagcgaggaccgggtggccccgcaggtaaaaagggtcggcctggagaa
gatggaagtccagggggaaaagggcaaaagggcgaggctgggctcagtggaattccaggt
cgggagggctcagagggaaaaccaggctacaagggagatacgggcgaaagaggagaatgt
ggcacacctggcatcaaaggagacaggggtcccgaaggtccagttggaacgagaggaatc
cgaggtctacaggggttacctggacctaatggtgacataggacctgagggccctacaggg
aaaaaaggtgaaagggggattccagggccatctggaattcaaggggaaactgggattggc
ctaccaggaccaaagggggatgttggtttccagggacgacacggccctccaggaccacct
ggtttaggagagccaggcctgccgggccctcaagggccacagggagttcaaggagagaaa
ggccccataggcgaaggtttccctggaccaaagggggaacggggtctggatgggcagaga
ggaactagaggaatgcctggtagtggaatcaagggagacaagggtgactttggacctcct
ggttttccaggtccctctggcctgacaggagctggcattcaaggagaaaagggtgtagaa
gggccacggggtccaccagggatcagaggcccacaaggggaaggatttcctggatccaag
ggtgaccagggcttgcctggggaagtgggagcaacaggagatagaggggctggcgaacct
gggccaaagggagaaccagggtcatcaggattgtctggtttccctggacttccaggagag
gatggcgccccagggcagaagggtgagccaggtgcttttggtcagagggggcctgacgga
gctcctgggattggcacccagggagagaagggagaccagggtcagaggggtatacgaggc
ttagcagggcctccaggcattgccgggccctctggggcgaagggggaacctgggactcca
ggtcgacttggtttaccaggatttcctgggcggggcatcttagggcccaagggggattca
ggtccacctggtccatccggaccagttggggagacaggttatggccttcctggtcctaag
ggtgatcgtggtgatttaggtccatcaggtccatttgggcccaaaggggagggctatcct
ggccctacaggtccccctggcctgcctgggcttactggagaaccaggcctggagggactg
gggattcccggaccaaagggagatgttgggttcagagggttgccaggtttgccaggacct
ccaggtgagggtctccaaggaccaccgggcaccattggaagaccaggaccaccaggccct
acagggcctgcaggacaggggttacaagggcctaagggtgagcagggctcccagggagtt
acaggtccaaggggacttcagggagaaggattcccaggggttaagggtgaccggggctct
ggaggggagagggggttgaaaggggttaaaggtgacatgggcgatccaggagtctctggc
gaagcaggacggcagggagtcaaaggtgaagcagggctcactagggaagacatcattcga
atgatcaaggagatatgtggttgtggtatcaagtgcaaggagaggcccatggaactggtg
tttgtgatcgacagctcagagagcgtgggcccggagaactttgagatcatcaaggacttt
gtgacggcgctggtggaccgggtcaccgtgggccgaaacgcaaccagaatcggcctggtc
ctttacagcctggaggtcaagctggagttcaacctggcccgccacataaacaaacaagac
gtgaagcaggccatcaggaacatcccctatatgggagaggggacctacacaggcactgcc
atccgcaaggccacccaggaagccttcttcagctctcgcactggggtcagcaaggtggcc
attgtcatcacagacggacagacggacaagcgggagcctgtgaagttagacatcgccgtg
cgggaggcgcacgccgccaacatcgagatgtacgctctggggattgtgaacacgtcagac
atcacgcaggtcgagtttctgagggagctaaacctgatcgcatcagaccctgatgaagag
cacatgttcctcattgacgacttcaacactcccccagctctggaatccaaactggtcagc
cagttctgtgaggacgaacgtggcgagctgatatacaaccgtatcactaacggttacgga
aacaacggctacaagaacaacttgaatggaaaatattccactggtagctatggttacgag
accaccaaccaggggggaatccaaactgggcagaggactgtcaacagtgttggcagtggt
ggccagagctatggagggagagaagggacatcccaaactattaactctgccacagatcag
atagggcagcgggagagaggacatgatgggggtgtcgcgacctctgacctggagactggt
ggcagggacacatataacctcaacacctcgtcctcttccagacctgggattcccagtagg
gagacattgtcctccaatacaggaggctcatcctccacatcaacctcatcttcatcctca
ggaacagtccagtatgtgccagcaccacggccagcccttccccaagagtttgtacccctg
gaccctcgttgtgccctgatcctggaccagggtccttgccgagactacaacatccgctgg
tactatgacaaacaggccaacgcctgcgcccagttttggtatgggggctgtgaaggcaac
aagaaccgctttgacacggaggaagagtgcaagagaatgtgtgtactagccagagccaca
ggtacctaa
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