Osmerus eperlanus (European smelt): 134007787
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Entry
134007787 CDS
T10927
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
134007787
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oep01009
]
134007787
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134007787
Protein phosphatases and associated proteins [BR:
oep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134007787
Cell adhesion molecules [BR:
oep04515
]
Cadherins
Protocadherins
134007787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
134007787
NCBI-ProteinID:
XP_062303446
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Position
21:3513111..3516669
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AA seq
891 aa
AA seq
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MFNKRNPSLGKIGAIWGLCILLLYTSPLSCFANFSQAKELLYKIKEGLPRGTLIGAVGRD
LNLDFNVDPPLLFNLPQKTNSEQYVHLNSTTGELYTSGTEIDREALCPDSGPGRYAADCV
LALDVFVLPQQHFQLVKVKILVEDVNDNRPRFPVDEIRVSVPENAPVNSRYAVEQSAVDP
DLGLHGVQTYWLVNDFGVFTLDVEENEGGELTPFLIVTEELDRETQGEYVTDIIAEDGGS
PPLLGTAALRIVIGDVNDNCPQFTESQVNVTVFGNATKGTPLTRLHAFDPDLGANAAVTY
AYSDRVPGDTRTLFHLDAATGVVRLAGKIDASTGKLYKLPVLAKGPGCIPAVATVTIHVV
RVATGPPVVVPRYIAAEKDGVVSVKESEPPFTPIAFFTVKNAEQRQKVDCHLEGSGPFRL
SPYKLFKNEYLLETTEALDYEQRRDYELTVVAKNSHGLVIKTSVRVRVLDENDNAPVFQQ
GLVEVSVEENNPPNTFLTQLQASDLDSEARGEVIYLLGSDAPSIFLVDRATGVLTVATSL
DREEKEKYRFTVRAVDRGAPRRESIATVIITVQDRNDNSPRFINKDFTFFVPENFPGFGE
IGVLSVTDPDAGENGWVALSILNGSDVFVIDTGRGALRARTPLDREQQGTYYLWIEAADG
GEPSLSCVAMVTVLLLDVNDNPPVVLFPQSNQSYMLVLPSTLPGTSITEVYAVDKDTGMN
AVIAYSIIRRKGGEPGSFDIDPDTGNITLRRELSDRGLYSLLVKVSDHGQPEPLHSTVVV
NLFVNETVSNESYVQSLLSREAEIEVEEKPWFVGQLTERQDRTETFPCRPLLIALATTCL
GLFSMVVTLLSYICCSKLKKHRKKQREVRVPLKMNGDIHAVDRKLMEISNI
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaaagaaaccccagccttggcaaaataggagcaatatggggattgtgcatt
ctcctgctttacaccagccctctctcctgttttgccaatttcagccaagcgaaagagctc
ctctataaaataaaggaaggattacccagggggactctcataggggctgtcggcagggac
ttaaacttggatttcaacgttgatcccccacttttattcaatctgccacaaaagacgaac
agtgagcagtacgtccacctgaacagcaccacaggggagctgtatacatctggcacggag
atcgacagggaggctctgtgtccagactcgggcccaggacgctacgctgcagactgtgtc
ctggccctcgacgtgttcgtcctccctcagcagcactttcagctggtcaaggtcaaaatc
ctggtggaggatgtcaacgacaaccggccccgtttcccggtggacgagatccgtgtgtcg
gtcccggagaacgccccggtgaactcgcgctacgccgtggagcagtcggccgtggacccg
gacctggggctccacggggtgcagacctactggctggtcaacgactttggcgtgttcacg
ctggacgtggaggagaacgagggcggcgagctgacccccttcctcatcgtgacggaggag
ctggacagggagacgcagggcgagtacgtgacggacatcatcgccgaggacggcggcagc
ccgcctctcctgggcacggccgcgctccgcatcgtcatcggcgacgtcaacgacaactgc
ccccagttcactgagtcccaagtcaacgtcaccgtgttcgggaacgccaccaaagggacg
ccgctgacacgcctccatgcgttcgatcccgacctgggcgccaacgccgccgtcacctac
gcctacagcgaccgcgtgcccggggatacgaggaccctgttccatctggacgcggccacg
ggggtcgtcaggctggcggggaagatcgacgccagcaccgggaagttatacaagctcccc
gtcctcgccaagggccccggctgcatccctgccgtcgccacggtgaccatccacgtggtc
cgggtggcgacgggacccccggtggtcgtgccgcgctacatcgcggcggaaaaagacggc
gtggtgtccgtgaaagagtcggagccgcccttcacacccatcgcgttcttcacagtgaag
aacgcggagcagaggcagaaggtggactgccacctggagggctcgggcccattcagactg
agcccctacaagctgttcaagaacgagtacctcctggagaccacggaggccctggactat
gaacagagacgggactacgagttgaccgtggtggctaagaactcccacggcctggtcatc
aagacctcggtccgcgtgcgggtcctggatgaaaacgacaacgctccggtgttccagcag
ggtctggtggaggtgtcggtggaagagaacaacccgcccaacaccttcctcacccagctg
caggcgagcgacctggacagcgaggcccgcggcgaggtcatctacctcctgggctcggac
gctccctccatcttcctggtggaccgggcgaccggcgttttaacggtggccacgtccctc
gaccgggaggagaaggagaagtaccgcttcacggtgcgggcggtggaccgaggggctccc
aggagggagtccatcgccacggtgatcatcaccgtgcaggaccgcaacgacaacagcccg
cgcttcatcaacaaggacttcaccttcttcgtgccggagaacttccccgggttcggggag
atcggcgtcctgtcggtgacggacccggacgcgggggagaacggctgggtggcgctgtcc
atcctcaacggcagcgacgtcttcgtcatcgacacgggccgcggcgccctgagggcgagg
acgccgctggaccgcgagcagcagggcacctactacctgtggatcgaggcggcggacggg
ggcgagccctccctctcctgcgtcgccatggtgacggtgctcctcctggacgtgaacgac
aacccccccgtcgtcctgttcccccagtccaaccagtcgtacatgctggtgctgcccagc
acgctgcccggcacttccatcaccgaggtgtacgccgtggacaaggacacgggcatgaac
gcggtcatcgcctacagcatcatcaggaggaaaggaggtgagccgggctcgttcgacatc
gacccggacacaggaaacatcaccctgaggagggagctgagcgaccgcggcctctacagc
ctcctggtgaaggtcagcgaccacgggcagcccgagcctctccactccacggtcgtggtc
aacctgtttgtcaacgagacggtcagcaacgagagctacgtccagagcctgctgagcagg
gaggcagagatcgaggtggaggagaagccgtggttcgtgggccagctcaccgagaggcag
gacaggacggagacgttcccgtgccgcccgctcctcatcgccctggcgaccacctgcctg
ggactgttctccatggtggtcacgttgctgtcgtacatctgctgcagcaagctgaagaag
caccgcaagaagcagagggaagtgagggtccctctgaagatgaacggggacatccacgcg
gtggacagaaaactcatggagatctcaaacatttga
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