KEGG   Osmerus eperlanus (European smelt): 134007787
Entry
134007787         CDS       T10927                                 
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:oep00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    134007787
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oep01009]
    134007787
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oep04515]
    134007787
Protein phosphatases and associated proteins [BR:oep01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     134007787
Cell adhesion molecules [BR:oep04515]
 Cadherins
  Protocadherins
   134007787
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th
Other DBs
NCBI-GeneID: 134007787
NCBI-ProteinID: XP_062303446
LinkDB
Position
21:3513111..3516669
AA seq 891 aa
MFNKRNPSLGKIGAIWGLCILLLYTSPLSCFANFSQAKELLYKIKEGLPRGTLIGAVGRD
LNLDFNVDPPLLFNLPQKTNSEQYVHLNSTTGELYTSGTEIDREALCPDSGPGRYAADCV
LALDVFVLPQQHFQLVKVKILVEDVNDNRPRFPVDEIRVSVPENAPVNSRYAVEQSAVDP
DLGLHGVQTYWLVNDFGVFTLDVEENEGGELTPFLIVTEELDRETQGEYVTDIIAEDGGS
PPLLGTAALRIVIGDVNDNCPQFTESQVNVTVFGNATKGTPLTRLHAFDPDLGANAAVTY
AYSDRVPGDTRTLFHLDAATGVVRLAGKIDASTGKLYKLPVLAKGPGCIPAVATVTIHVV
RVATGPPVVVPRYIAAEKDGVVSVKESEPPFTPIAFFTVKNAEQRQKVDCHLEGSGPFRL
SPYKLFKNEYLLETTEALDYEQRRDYELTVVAKNSHGLVIKTSVRVRVLDENDNAPVFQQ
GLVEVSVEENNPPNTFLTQLQASDLDSEARGEVIYLLGSDAPSIFLVDRATGVLTVATSL
DREEKEKYRFTVRAVDRGAPRRESIATVIITVQDRNDNSPRFINKDFTFFVPENFPGFGE
IGVLSVTDPDAGENGWVALSILNGSDVFVIDTGRGALRARTPLDREQQGTYYLWIEAADG
GEPSLSCVAMVTVLLLDVNDNPPVVLFPQSNQSYMLVLPSTLPGTSITEVYAVDKDTGMN
AVIAYSIIRRKGGEPGSFDIDPDTGNITLRRELSDRGLYSLLVKVSDHGQPEPLHSTVVV
NLFVNETVSNESYVQSLLSREAEIEVEEKPWFVGQLTERQDRTETFPCRPLLIALATTCL
GLFSMVVTLLSYICCSKLKKHRKKQREVRVPLKMNGDIHAVDRKLMEISNI
NT seq 2676 nt   +upstreamnt  +downstreamnt
atgttcaacaaaagaaaccccagccttggcaaaataggagcaatatggggattgtgcatt
ctcctgctttacaccagccctctctcctgttttgccaatttcagccaagcgaaagagctc
ctctataaaataaaggaaggattacccagggggactctcataggggctgtcggcagggac
ttaaacttggatttcaacgttgatcccccacttttattcaatctgccacaaaagacgaac
agtgagcagtacgtccacctgaacagcaccacaggggagctgtatacatctggcacggag
atcgacagggaggctctgtgtccagactcgggcccaggacgctacgctgcagactgtgtc
ctggccctcgacgtgttcgtcctccctcagcagcactttcagctggtcaaggtcaaaatc
ctggtggaggatgtcaacgacaaccggccccgtttcccggtggacgagatccgtgtgtcg
gtcccggagaacgccccggtgaactcgcgctacgccgtggagcagtcggccgtggacccg
gacctggggctccacggggtgcagacctactggctggtcaacgactttggcgtgttcacg
ctggacgtggaggagaacgagggcggcgagctgacccccttcctcatcgtgacggaggag
ctggacagggagacgcagggcgagtacgtgacggacatcatcgccgaggacggcggcagc
ccgcctctcctgggcacggccgcgctccgcatcgtcatcggcgacgtcaacgacaactgc
ccccagttcactgagtcccaagtcaacgtcaccgtgttcgggaacgccaccaaagggacg
ccgctgacacgcctccatgcgttcgatcccgacctgggcgccaacgccgccgtcacctac
gcctacagcgaccgcgtgcccggggatacgaggaccctgttccatctggacgcggccacg
ggggtcgtcaggctggcggggaagatcgacgccagcaccgggaagttatacaagctcccc
gtcctcgccaagggccccggctgcatccctgccgtcgccacggtgaccatccacgtggtc
cgggtggcgacgggacccccggtggtcgtgccgcgctacatcgcggcggaaaaagacggc
gtggtgtccgtgaaagagtcggagccgcccttcacacccatcgcgttcttcacagtgaag
aacgcggagcagaggcagaaggtggactgccacctggagggctcgggcccattcagactg
agcccctacaagctgttcaagaacgagtacctcctggagaccacggaggccctggactat
gaacagagacgggactacgagttgaccgtggtggctaagaactcccacggcctggtcatc
aagacctcggtccgcgtgcgggtcctggatgaaaacgacaacgctccggtgttccagcag
ggtctggtggaggtgtcggtggaagagaacaacccgcccaacaccttcctcacccagctg
caggcgagcgacctggacagcgaggcccgcggcgaggtcatctacctcctgggctcggac
gctccctccatcttcctggtggaccgggcgaccggcgttttaacggtggccacgtccctc
gaccgggaggagaaggagaagtaccgcttcacggtgcgggcggtggaccgaggggctccc
aggagggagtccatcgccacggtgatcatcaccgtgcaggaccgcaacgacaacagcccg
cgcttcatcaacaaggacttcaccttcttcgtgccggagaacttccccgggttcggggag
atcggcgtcctgtcggtgacggacccggacgcgggggagaacggctgggtggcgctgtcc
atcctcaacggcagcgacgtcttcgtcatcgacacgggccgcggcgccctgagggcgagg
acgccgctggaccgcgagcagcagggcacctactacctgtggatcgaggcggcggacggg
ggcgagccctccctctcctgcgtcgccatggtgacggtgctcctcctggacgtgaacgac
aacccccccgtcgtcctgttcccccagtccaaccagtcgtacatgctggtgctgcccagc
acgctgcccggcacttccatcaccgaggtgtacgccgtggacaaggacacgggcatgaac
gcggtcatcgcctacagcatcatcaggaggaaaggaggtgagccgggctcgttcgacatc
gacccggacacaggaaacatcaccctgaggagggagctgagcgaccgcggcctctacagc
ctcctggtgaaggtcagcgaccacgggcagcccgagcctctccactccacggtcgtggtc
aacctgtttgtcaacgagacggtcagcaacgagagctacgtccagagcctgctgagcagg
gaggcagagatcgaggtggaggagaagccgtggttcgtgggccagctcaccgagaggcag
gacaggacggagacgttcccgtgccgcccgctcctcatcgccctggcgaccacctgcctg
ggactgttctccatggtggtcacgttgctgtcgtacatctgctgcagcaagctgaagaag
caccgcaagaagcagagggaagtgagggtccctctgaagatgaacggggacatccacgcg
gtggacagaaaactcatggagatctcaaacatttga

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