Osmerus eperlanus (European smelt): 134007827
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Entry
134007827 CDS
T10927
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oep01002
]
134007827
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134007827
Enzymes [BR:
oep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134007827
Peptidases and inhibitors [BR:
oep01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
134007827
Ubiquitin system [BR:
oep04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
134007827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
RasGEF_N
Vps23_core
Motif
Other DBs
NCBI-GeneID:
134007827
NCBI-ProteinID:
XP_062303510
LinkDB
All DBs
Position
21:637931..666221
Genome browser
AA seq
2584 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDAQSPPPPPQNQTASPSSSTEPSPVSPAEEQGQGDAAPAL
EEDEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDGKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVSKLSQDWFPLLELLAMAVNP
HCKFHIYNGTRPSETVPAGATLADDELYARPPDPRSPKVGAGAGGWLVDLINKFGTLNGF
QILHDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKFFLPVIEMVPQFLENLTDEEL
KKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNA
LNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLE
KILRFVIKEKALTMQDLDSIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKA
SWTSASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIK
ILDYSCSQDRDTQKIQWIDRFIEELRTNEKWVIPALKQIREICSLFGEAPQNLSQTQRSP
HVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKAEHADFDPQNVRVGSRYSHVQE
VQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAESAVFLCDREACFKWYSKLMGDEPDLDP
DINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDY
LWKVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYDTLCVL
DRDKDSINCARQEAIRMVRVLNVLKEYINECDSDYHEERSILPMSRAFRGKHITLIVRFP
NQGRQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTKIELFIGGEVVDPADDRKLIGQL
NLKDKTLITAKLTQVSATVPSSPDSSSDSSTGSPGNHGNHFSEGPNPEVESCLPGVIMSL
HLRYISFLWQVADLGCTLNMPLLRDGARLLTKLMPPDTSTVENLRAICLDHAKLGENSLS
PTLDSRFFGPSPSQVLYLTEVVYALLMPASGTLGEDACDFQFNFLKSGGLPLVLSMLTRN
NFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPEVEGTTPASPVNNPINQ
ATHDQALVLQNALQNIPNPASECMLRNVAIRLAQQISDEQNFFQASKYIPDICVIRAVQK
IVWASGCGTVQLVFSSNEDISQIYEKTNAGQEPDGEDEQVCCEALEVMTLCFALLPTALD
TLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGTT
AKERAKQAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNQIAWLKRIRDEVKRSGETGVEE
TILEGHLGVTKELLSFQTPQKKFYIGCETGGANLIKELIDDFIFPASNVYLQYMKSGEFP
PEQAIPVCSSPASINAGLELLVALAVGCVRNLKQIVDTLTDMYYLGCESLTEWEYLPPVG
PRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAVEGTGSDVDEDTSGDEKQESEG
NADPRDEVFSYNHQFDDKPKSEDRKEYNMGVLRHLQVIFGHLAASRLQYYVPRGFWKQFR
LWGEPVNLREQHDALEFFNSLVDSLDEALKALGHASMLSKVLGGSFADQKICQGCPHRYE
CEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPV
LAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDGNPESQMIQQNEP
SEPEPPGCSSRYRLVGVLVHSGQASGGHYYSYIVQRDGSRGDSGQRDVSGGDSGQRDRWY
KFDDGDVTECKMDDEEEMKSQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDT
QGGAPADAELAKCISELTVSPPTTPRQVKMPGAIECSVRKQNVQFMHSRMQYSLEYFQFI
KKLLTCNSVYLNPPPGQDHLLPEAEEIAMISIQLAARFLFSTGFHTKKVVRGPASDWYDA
LCILLRHSKNVRCWFSHSVLFSYPTRFSEHLLECPSAEVRGAFAKLIVFIAHFSLQDGPC
PAPTTSPGGTTQACDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEK
SQLLKLNVPATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLLRCCDVSARMQSSINGNP
ALPNPYGDPSLTAPITPLQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQF
SSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTI
QRSKNHYQKRAYQCIKCMVALFSTCTVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTG
NPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEEEPDDQEAPDDHDSSPP
EDTALYPHPPAGTQYQQQNNLPHGQPYTGPAAQHMNAPQRPPQRAQESWETTEEGVPPPV
QAKE
NT seq
7755 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacccgtggctctcctgtcggcggcaatgacagccagggccaggcgcct
gacgctcagagcccgccccctcccccacagaaccagacggcgtcccccagctcgtccaca
gagccttccccggtgagcccagcggaggagcagggccagggcgacgccgcccccgccctg
gaggaggacgagccagccttcccccacacagatctggccaagctggatgacatgatcaac
aggcctcgctgggttgtaccagtcctaccaaagggggagttagaggtcctacttgaagct
gctatcgaccttagtaaaaaagggctggatgggaagtgtgaggcctgccagaggtttttc
cgtgacggcctgaccatctctttcaccaagatcctcacagacgaggctgtgagcgggtgg
aagtttgagattcacagatgcatcatcaacaacacccaccgcctggtggagctgtgtgtg
agcaagctctctcaggactggtttcctctgctggagctgctggccatggccgtcaacccc
cactgcaagttccacatctacaacggcacacggccctctgagaccgtccctgccggcgcc
acgctggccgacgacgagctgtacgcgcgcccccccgacccccgctcgcccaaggtaggg
gcaggggcagggggctggctggtggatctgatcaacaagtttggaaccctgaacgggttt
cagatcctccacgatcgcttcatgagtggacaggccctcaacgtccagatcatcgctgcc
ctcatcaaaccgttcgggcagtgctacgagttcctcacgctgcacacggtgaagaagttc
ttcctcccggtgatcgagatggtccctcagttcctggagaacctcacggacgaggagctg
aagaaggaggccaagaacgaggccaagaacgacgctctgtccatgatcatcaagtccctg
aagaacctggcgtccagggtccccggccaggaggagaccgtaaagaacctggagatcttc
cgcctgaagatgatcctcaggttactgcagatctcctctttcaacggcaagatgaacgct
ctgaacgaggtgaacaaggtcatctccagtgtgtcctactacacacaccgccatggcaac
cccgaggaggaggagtggctgacggctgaacgcatggcggagtggatccagcagaaccac
atcctgtccatcgtcttgagggacagcctgcaccagccgcagtacgtggagaagctggag
aagatccttcgcttcgtcatcaaggagaaggctctcaccatgcaggacctggacagcatc
tgggcggctcaggctgggaaacacgaggcgatagtgaagaacgttcatgacctcctggcc
aagctggcctgggacttctcccctgagcagctggaccatctgttcgactgcttcaaggcc
agctggaccagcgccagtaagaagcagcgtgagaagctgctggagctgatcaggcgcctg
gcggaggacgataaggatggcgtgatggcccacaaggtgctcaacctgctgtggaacctg
gcacacagcgacgatgtccctgtggacatcatggaccaggccctcagcgcacacatcaag
atcctggactacagctgctctcaggacagagacacccagaagatccagtggatcgaccgc
ttcatcgaggagctccggaccaatgagaagtgggtgatcccggccctgaagcagatcaga
gagatctgcagcctgtttggagaggcgccacagaacctcagtcagacccagaggagtcct
cacgtgttctaccgccacgacctgatcaaccagctgcagcacaaccatgcgctggtcacc
ctggtggctgagaacctgtctgcctacatggagaccatgcgccagttctccaaagcagag
catgcggacttcgacccccagaacgtgagggtgggcagccgatacagccacgtacaggaa
gttcaggaaagactaaacttcctgaggttcctgctgaaggatggccagctgtggctctgt
gctccccaggccaagcagatctggaagtgtctggctgagagcgctgtcttcctgtgtgac
cgcgaggcctgtttcaaatggtactccaagctgatgggcgacgagcctgacctggaccca
gacatcaacaaggacttctttgagaacaatgttctgcagttggacccgtctctgctgacg
gagaacgggatgaagtgcttcgagaggttcttcaaggccgtcaactgccgtgagggcaag
ctggtggccaagcgcagggcttacatgatggacgacctggagctcatcggactggactac
ctgtggaaggtggtcatccagggcagcgacgacatcgccagcagagccatcgacctcctg
aaagagatctacaccaacctggggcccaagctgcaggtcaaccaggtggagatccacgag
gacttcatccagtcgtgtttcgaccgcctgaaggcatcgtacgacactctgtgtgttctg
gaccgagacaaggacagcatcaactgtgcccgccaggaagccatccgcatggtccgagtg
ctcaacgtgttgaaggagtacatcaacgagtgtgacagtgactaccatgaggagaggagc
atactgcccatgtccagggcgttccgggggaagcacatcacgttgatcgtgcggttcccc
aaccaggggcggcaggtggacgacctggacatctggtcccacaccaacgacaccatcggc
tctgtgaggaggggcatcctcacccgcatcaaggccaatgccacgcacaccaagatagag
ctgttcattggtggagaggtggtggatccggccgacgacaggaagctgattggacagctc
aacctcaaagataaaacgctgataacagctaagctgacccaggtgagcgctacggtgccg
tccagtcctgacagctcctcagactcctccaccggctcacccgggaaccacggcaaccac
ttcagtgagggccccaaccccgaggtggagagctgtcttcctggagtgatcatgtctctg
cacctgcgctacatctccttcctgtggcaggtggccgacctgggctgcaccctcaacatg
cccctgctccgagacggagcaaggctactgaccaagctcatgcccccagacaccagcacg
gtggagaacctgcgagccatctgtctggaccacgccaagctgggggagaacagcctcagc
cccaccctggactctcgcttcttcggcccctcgccttcccaagtgctttacctcaccgag
gtggtgtacgctctgctcatgcctgccagcggcaccctgggagaggacgcctgcgacttc
cagttcaacttcctgaagagcggcgggctcccgctcgtactgagcatgctcaccaggaac
aacttcctgcccagcgccgacatggagacccgtcggggggcgtacctcaacgccctgaag
atcgccaagctgctgctcaccgccgtgggcttcgggcacgtgaaggcggtggcagaggcg
tgccagccggaggtggagggcaccaccccagcctcgccggtaaataaccctatcaaccag
gccacgcacgaccaggcgctggtgctgcagaatgcacttcagaacatcccaaaccccgcc
tctgagtgcatgctgcgcaacgtggccatccggttggctcagcagatctctgacgagcag
aacttcttccaggcgtctaagtacatcccagacatctgtgtgatccgggcagtgcagaag
atcgtgtgggcgtcaggctgcggcactgtgcagctggtcttcagctccaacgaagacatc
agccagatctacgagaagacgaatgcggggcaggagccagatggggaggatgagcaggtg
tgctgcgaggccctggaggtcatgaccctgtgcttcgccctgctgcccacggccctggac
accctcagcaaggagaaggcctggcagaccttcatcatagatctgctgctgcactgccac
agcaagtctgtgaggcagatggcccaggagcagttcttcctcatggccaccaggtgctgt
atgggccacagacccctcctgttcttcataaccctgctgttcaccgtgttggggacgaca
gctaaggagcgggcgaagcaggctggagactacttcaccctgctgagacacctcctcaac
tacgcctacaacagcaacatcaacctgcccaatgccgaggtgctgctcaacaaccagatc
gcctggctcaagaggatcagggacgaggtgaagcggtcgggggagactggggtggaggag
accattctggaaggtcacctgggggtcaccaaggagctgctctctttccagactccacag
aagaagttctacatcggctgtgagacgggaggggctaacctcatcaaggagctgatagat
gacttcatcttccctgcgtctaacgtgtacctgcagtacatgaagagtggggagttcccc
ccagagcaggccatccctgtgtgcagcagccccgcctctatcaacgccggcttggagctg
ctggtggcgctggcggtgggctgtgtacgcaacctcaagcagatcgtcgacacgctcacc
gacatgtactacctaggctgtgagtctctgacggagtgggagtacctgccccccgtaggc
ccgcgacccaccaagggcttcgttgggctgaagaacgcgggcgccacctgctacatgaac
tcagtcatccagcagctctacatgatcccgcccatacgcaacggcatcctggccgtggag
gggaccggctccgacgtggacgaagacacgtcaggagacgagaagcaggagagcgagggt
aacgcagaccctcgggacgaagtgtttagctacaaccaccagtttgacgacaagcccaag
tctgaggacaggaaggagtacaacatgggggtgctgcgccacctgcaggtcatctttggt
cacctggccgcctctaggctgcagtactacgtccccagagggttctggaagcagttcagg
ttgtggggggagccggtgaacctgcgcgagcagcacgatgcgctggagttctttaactcc
ctggtggacagtctggacgaggccctgaaggccctgggacatgcctccatgctcagcaag
gtgctggggggctcctttgccgaccagaagatctgccagggctgtcctcacaggtacgag
tgtgaggagtccttcaccacgttgaacgtggacatcagaaaccaccagaaccttctggac
tccatggagcagtacgtgaagggagacctgctggagggggccaacgcctaccactgtgaa
aagtgcaacaagaaggtggacacggtgaagaggctgctcattaagaagctgcccccggtc
ctggccatccagctgaagcgcttcgactacgattgggagagggagtgtgccatcaagttc
aacgactactttgagttcccccgtgagctggacatggagccctacaccgtggcgggcgtg
gccaagctggagggggacgatgggaacccagagagccagatgatccagcagaacgagccg
tccgaacccgagccccctggctgcagttcccgctaccgcctggtcggtgtgctggtgcac
tcgggccaggccagcgggggacattactactcctacatcgtccaacgagacggctccagg
ggtgacagcggccagagagacgtctccgggggcgacagtggccagagagaccgctggtac
aagtttgacgacggcgacgtgacggagtgcaagatggacgacgaggaggagatgaagagc
cagtgctttgggggggagtacatgggggaggtgttcgaccacatgatgaagaggatgtca
taccgccggcagaagcgctggtggaacgcctacatcctgttctacgagaggatggacacg
cagggaggagccccagccgacgccgagctcgccaagtgcatctcagagctcaccgtctct
ccacccaccaccccgcgacaggtgaagatgccaggggccattgagtgcagcgtgaggaag
cagaacgtgcagttcatgcacagccgcatgcagtacagcctggagtactttcagttcatc
aagaaactgctcacctgcaacagcgtctacctcaaccctcctccaggtcaggaccacctg
ttacctgaggcggaggagatcgctatgatcagcatccagttggcggctcgcttcctgttc
agcaccggcttccacaccaagaaggtggtccgagggccagccagcgactggtatgatgct
ctctgcatcctgctgcgccacagtaagaatgtccgctgctggttctcccacagcgttctg
ttctcctaccccacacgcttctcagagcacctgctggagtgtcctagtgcagaggtgcgc
ggggccttcgccaagctcatcgtcttcatcgcacacttctccctgcaggacgggccctgc
cccgcccccaccacctccccggggggcaccacacaggcatgtgataacctgagtctgagc
gaccacctgctgagagcagtgctcaacctgctgaggagggaggtgtcagagcacgggcgc
cacctgcagcagtacttcaacctgttcgtcatgtatgccaacctgggcctggcagagaag
agccagctgttgaagttgaatgtgcccgccaccttcatgctggtggccctggacgagggc
ccggggccccccatcaagtaccagtacgctgagctgggcaagctgtacaccgtggtgtcc
cagctgctgcgctgctgcgacgtgtctgctcgcatgcagtcctccatcaatggtaaccca
gccctgcccaacccctacggagatcccagcctcacggctcccatcacacccctgcagcag
ctggtggcggagatcctgtttgtgaggacgagctacgtgaagaagatcatcgaggactgc
agcaactcggaggagacggtgaagctgctgcgcttcagctgctgggagaacccccagttc
tcctccacggtgctcagtgagctgctctggcaggtggcgtactcctacacctacgagctc
aggccttacctggacctgctgctacagatcctgctcatcgaggactcctggcagacacac
aggatccacaacgttctgaagggtatccctgacgaccgtgacgggctgttcgacaccatc
cagcgctccaagaaccactaccagaaacgagcctaccagtgtatcaagtgcatggtggcc
ctcttcagtacctgcaccgtggcctaccagatcctgcagagcaacggggacctgaagcgt
aagtggacgtgggcggtggagtggctgggtgacgagctggagaggaggccgtacaccggg
aacccccagtacacctacaacaactggtctcctcccgtccagagcaacgagacgtccaac
ggctacttcctggagcgctcgcacagcgctcgcatgaccctggccaaggcctgcgaactc
tgcccagaggaggagcccgatgaccaggaggctccagatgatcatgactcctcccctccc
gaggatactgcactgtacccccacccccctgctggcacacagtaccaacagcagaacaac
ctccctcacggccagccttacaccgggccagccgctcagcacatgaacgcaccccagcgc
cccccccagagagcgcaggagtcctgggagaccacggaggagggagttccccccccggtc
caggcgaaagagtaa
DBGET
integrated database retrieval system
