Osmerus eperlanus (European smelt): 134007934
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Entry
134007934 CDS
T10927
Symbol
eprs1
Name
(RefSeq) bifunctional glutamate/proline--tRNA ligase isoform X1
KO
K14163
bifunctional glutamyl/prolyl-tRNA synthetase [EC:
6.1.1.17
6.1.1.15
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep00860
Porphyrin metabolism
oep00970
Aminoacyl-tRNA biosynthesis
oep01100
Metabolic pathways
oep01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
134007934 (eprs1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
134007934 (eprs1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oep01007
]
134007934 (eprs1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oep03016
]
134007934 (eprs1)
Enzymes [BR:
oep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
134007934 (eprs1)
6.1.1.17 glutamate---tRNA ligase
134007934 (eprs1)
Amino acid related enzymes [BR:
oep01007
]
Aminoacyl-tRNA synthetase
Class I (A)
134007934 (eprs1)
Transfer RNA biogenesis [BR:
oep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
134007934 (eprs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHEP-TRS
tRNA-synt_1c
tRNA-synt_2b
ProRS-C_1
HGTP_anticodon
tRNA-synt_1c_C
tRNA-synt_1c_C2
Arc1p_N_like
GST_C
GST_C_3
tRNA-synt_1e
GST_C_2
Motif
Other DBs
NCBI-GeneID:
134007934
NCBI-ProteinID:
XP_062303677
LinkDB
All DBs
Position
21:complement(12590052..12625344)
Genome browser
AA seq
1730 aa
AA seq
DB search
MAFNLTVNSSNPPIGALLTAEHVKGIMNVSVTEGKETKLHISDLVQFSDANSIMRYLARA
APSMGLYGSNVMEHTEVDHWLEFGASRVCGQSSLAVALAELDKALALRTFLVGHSLTLAD
LSVWASLKGNAEWQSQVKSFSHVRRWFYFLGSQEPFSSVGNKWASSKLPTCCSSEEREKK
QDLGKFVELPGAEMGKVVVRFPPEASGYLHIGHAKAALLNQHYQVTFKGKLIMRFDDTNP
EKEKEDFEKVILEDVSQLQIKPDQFTYTSDHFPKIQNMAEKLLKEGKAYIDDTPPEQMKQ
EREQRVESKHRSNSVEQNLKMWEEMKAGTEYGQRCCMRAKIDMSSNNGCMRDPTLYRCKN
TPHPRTGSTYRVYPTYDFACPIVDSVEGVTHALRTTEYHDRDDQFYWMIEALGIRKPYIW
EYARLNLNNTVLSKRKLTWFVDQGYVDGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQGGS
RSVVNMEWDKIWAFNKKLPISCIKVIDPVAPRYTALSGSYVVPVSIPEAQEEMKEVAKHP
KNTEVGMKEVWYGPRVLVEGADAETFHEGETVTFINWGNIVITKIHKDASAKVSSMEARL
DLENRDYKKTTKITWLAEADRAPLLPTVCVNYQHLITKPVLGKDDDFKAYINHQSKLEEK
MLGDPCLKSLKKGDIIQLQRRGFYICDQPYEQVSPHSCKESPCVLFYIPDGHTKEMPTAG
SKDKTKGQVSSTPVSKSKAASAPASTPAPAPAPGGDVFSSIVAQGEAVRLLKAAKAPKEE
VDKAVQQLLTLKAKFKQQTGQDYKPGMAAPPSSSPAPPTPSSDSVSCPFACVVEQAELVR
KLKAEKAPKDQVDAAVKQLLALKAEFKQLTGQEYKPGMAPPAPAPSPAPAQAVPVSGSTD
LYERVTQQGDLVRKLKTEKAQKDQVDAAVKLLLALKAEYKQSTGQDYKPGAALTSAPKSA
PVQTSPVPAAGLDVYERVSHQGELVRKLKAEKAPKDQVDAAVKLLLALKAEYKQATGQDY
KPGAAPTSAPKSAPDQTAPASAAGLGIYELVSQQGELVRKLKAEKAPKDQAEAAVKQLLA
LKAEYKQQTGHDYKPGLQAPAAPAEASLTQSAQGPSPQCKELFSQVAQQGELVRKLKSEK
APKDQVDEAVKTLLSLKNQYKALTGEDYKPLSTTGTPGAEDKNRKERENKTEKQGGGGGG
KKGKGDKPSQGKEALIGGGAGEGQAPKKQTRLGLEAKKEENLADWYSQVITKAEMIEYYD
VSGCYVLRPWSFSIWEAIKEFFDREIKKLGVENCYFPMFVSQAALEKEKSHIEDFAPEVA
WVTRSGKTELAEPIAVRPTSETAMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFL
RTREFLWQEGHTAFATKEEAAEEVLQILDLYARVYEELMAIPVVKGRKTEKEKFAGGDYT
TTVEAFISASGRAIQGATSHHLGQNFSRMFDIVFEDPKKPGEKQLAFQNSWGITTRTIGV
LTMVHGDNMGLVLPPRVACLQVIIIPCGLTASLPEAEKEALLAQCSKYLARLQQAQIRVK
ADLRDNYSPGWKFNHWELKGVPIRLEVGPKDMKQQQCVAVRRDTGDKITLPESETEKRLP
LLLEEIQNNLYTRASADLNQHMVVADTMEQFQKDLDQGRIVQIPFCGGIECEDWIKKTTA
KDQDLEPGAPSMGAKSLCIPFNPLRTLQPGQTCVSGKEPAKYYTLFGRSY
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttaatcttaccgtaaactctagcaaccctcctataggggcactgttgacagct
gagcacgtcaaaggcatcatgaacgtgtctgtgacagagggcaaagagaccaaactccac
atttcagatttagtccagttcagtgatgctaactccatcatgcgctacctggcccgtgca
gcccccagcatgggcctgtatggctccaacgtaatggagcacactgaggtggaccactgg
ctggagttcggtgccagccgtgtgtgtggtcagtctagtctagcagtagccctagctgag
ctggacaaggccttggcactgcggaccttcctggtggggcacagcctcactctggcagac
ctgagtgtgtgggcatcacttaaaggtaatgctgagtggcagagccaggttaagtcgttc
tctcatgtgagacgctggttctacttcctgggatctcaggagcctttttcctctgtggga
aacaagtgggccagcagcaagctccccacatgctgctcttcggaggagagggagaaaaag
caggacctggggaagtttgtggagctgcctggagctgagatgggcaaggtggtggttcgt
ttccccccagaggccagtggatacctgcacattggccatgctaaggcagccctgctcaac
cagcactaccaggtcaccttcaaaggcaaactcatcatgcgctttgacgataccaacccc
gagaaggagaaggaagactttgagaaggtaatcctggaggatgtgtcccagctccagatc
aagccagaccagttcacctacaccagtgaccatttcccaaagatccagaacatggccgag
aagctgctgaaggagggcaaggcctacatagatgacacgcccccagagcagatgaagcag
gagagggagcagcgtgtggagtccaaacaccgcagcaactcggtggagcagaacctgaag
atgtgggaggagatgaaggcaggtacagagtacggacagagatgctgcatgagggccaag
atcgacatgtcctccaacaatggctgcatgagggaccccactctgtaccgctgcaagaac
accccccacccccgtacaggaagcacctacagagtgtaccccacctacgactttgcgtgc
cccattgtggacagcgtggagggggtgacccatgccctgaggaccacggagtatcacgac
agagacgaccagttctactggatgatcgaagccctgggcatcaggaaaccctacatctgg
gagtacgccaggctcaacctcaacaacaccgtgctctccaagaggaagctcacctggttc
gtggaccagggctacgtggacggatgggacgacccccggttccccaccgttagaggagtc
ctccgcaggggcatgaccgtcgagggcctcaaacagttcattgcagcccagggtggatcc
agatcagtagtcaacatggagtgggataagatctgggctttcaacaaaaagctgccaatt
agctgtatcaaggtaattgatccagtggcccccagatacacggcactatcagggtcctat
gtggttcctgtctccatcccagaggcccaggaagagatgaaggaagtggcaaaacacccc
aagaatactgaggtggggatgaaggaggtgtggtatgggcccagggtgctggtggagggg
gcagacgccgagaccttccacgagggggagacggtcaccttcatcaactggggcaacatt
gtcatcaccaagatccacaaagacgcgagtgctaaggtgtcgtccatggaggcccgtttg
gacctggaaaaccgggactacaagaagaccaccaagatcacctggctggccgaggcagac
cgtgcccctctactgcccaccgtgtgtgtcaactaccaacacctcatcaccaagcctgtc
ctggggaaggatgatgacttcaaggcctacattaaccaccagagcaagctggaggagaag
atgctgggagatccctgcctgaagagcctgaagaagggagacatcattcagctacagagg
cggggcttttacatctgtgaccagccctatgaacaagtcagtccccacagctgtaaggag
agcccctgtgtgctattctacattcctgatggacacaccaaggagatgcccacggctggt
tccaaggacaagaccaagggccaggtctcctccacacctgtttccaaatccaaggcagcc
tcagccccagcctcgaccccggccccagccccagccccagggggagatgtgttttccagc
attgtggcccagggcgaggccgttcgcctcctcaaggctgccaaggcccccaaggaggag
gtggacaaggccgtacagcagcttctcactctcaaggccaagttcaagcagcagacaggc
caggactacaagcctggcatggctgctcctcccagctccagccccgccccacccacccct
tcctcagactcagtctcttgtccatttgcttgtgtggtcgagcaggcggagctagtcagg
aagctgaaggctgagaaggctcctaaggaccaagtggatgccgcagtcaagcagttgcta
gctctcaaagccgagttcaaacagctgactggccaggagtacaaaccagggatggccccc
ccagccccagcccccagcccagcccccgcgcaggccgtcccagtctcagggtccacagac
ctgtatgagagggtgactcagcaaggggatctggtcaggaagctgaagactgagaaagcc
caaaaggatcaggttgatgcagcagtaaagttgctgctggccctgaaggcagagtacaag
cagtccactggccaggactacaagcctggagctgcccttacttctgcccctaaatctgcc
cctgtccaaacttcccctgtccctgcagcaggcctggacgtctatgaacgtgtgtctcac
cagggcgagctagtgaggaagctgaaggcagagaaagctcccaaagaccaggttgatgca
gcagtaaagttgctgctggctctgaaggcagagtacaagcaggccactggccaggactac
aagcctggagctgcccctacttctgcccctaaatctgcccctgaccaaactgccccggcc
tctgcagcaggcttgggcatctatgagcttgtgtctcaacagggggagttagtgaggaag
ctgaaggcagagaaagctcccaaagaccaggcggaggctgcagtgaaacagcttctggct
ctcaaagcagagtacaaacagcaaacaggacatgactacaaacctggactacaagctcca
gcagcccctgctgaggctagtctcacccagtccgcacaaggcccctctccccagtgcaag
gagttgttctcccaggttgcccaacagggggagctagtgaggaagctgaaatcagagaag
gctcccaaggaccaggtggatgaggcggtgaagacccttctgtccttaaagaaccagtac
aaagcccttactggtgaggactacaaaccactgtcgaccactggcacacctggtgccgag
gacaagaaccgcaaagagcgtgaaaacaagaccgagaagcagggaggaggaggaggaggg
aagaaggggaagggagacaagcccagtcaggggaaggaggcattaataggaggaggagca
ggagagggccaggcacccaagaaacaaaccaggttgggtctggaggctaagaaggaagag
aacttggcggactggtactctcaggtgatcaccaaggctgagatgatcgagtactatgac
gtgtctggctgctacgtgctgagaccctggtccttctccatctgggaggccattaaagag
ttctttgatcgtgagatcaagaagctgggtgtggagaactgctacttccccatgtttgtc
tcccaggccgctcttgagaaggagaagtcccacatcgaggactttgcacctgaggttgcc
tgggtaacacggtcaggaaaaaccgagctagctgagcccatcgctgtccgacctaccagc
gagacagccatgtacccagcctatgccaagtgggtccagtcccacagagacctgcccatc
aagctgaatcagtggtgcaacgtggtgaggtgggagttcaaacatccccaacccttcctg
aggaccagggagttcttgtggcaggagggacacacagcgttcgccaccaaagaggaggca
gccgaggaggtgttacagatcctggacctgtatgcacgggtgtacgaggagctgatggcc
atcccagtagtgaaaggcagaaaaacggagaaggagaagtttgcaggcggagactatacc
accactgtggaggcctttatttcagcaagcggcagagccatccagggtgccacctcccat
cacctgggtcagaacttttcccgcatgtttgacattgtgtttgaagatcctaagaagccc
ggggagaagcagctggccttccagaactcctgggggatcaccacaaggaccatcggcgtt
cttaccatggtccacggagacaacatgggtctggtgctgccaccaagggtagcatgtctg
caggtcatcattatcccgtgtggcctcacagcctccctccccgaggcagagaaggaggct
ctcctggcccagtgttccaagtacctggctcgcctacagcaggcccaaatccgcgtcaag
gccgatctcagggataactactcccctggttggaagttcaatcactgggagctcaagggt
gtgcctatccgacttgaggtgggtcctaaggacatgaagcagcagcagtgtgtggcggtg
aggagagacactggggacaagatcaccctgcctgagtccgagacggagaagaggctcccc
ctgctgctggaggagatccagaacaacctgtacactcgggcatcagctgacctgaatcag
cacatggtggtagcagacacaatggaacagttccagaaggacctggaccagggcaggatt
gtccaaatccccttctgtggaggtattgagtgtgaggactggattaagaagaccacagct
aaggaccaagaccttgaacccggggccccctcaatgggagctaagagcctgtgtatcccc
ttcaatcccctgaggaccctgcagcctggacagacctgcgtcagcggcaaggagcccgca
aagtactacaccctttttggacgcagctactga
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integrated database retrieval system
