Osmerus eperlanus (European smelt): 134007943
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Entry
134007943 CDS
T10927
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04148
Efferocytosis
Brite
Membrane trafficking [BR:
oep04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
134007943 (vps8)
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GFIT
Other DBs
NCBI-GeneID:
134007943
NCBI-ProteinID:
XP_062303688
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Position
21:11109524..11133689
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AA seq
1422 aa
AA seq
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MSESAESPDTRSLVSASSQLNLMEIDTIDDKEFDIPQVDTPPTLESILNEPEEEEEPFIL
EDTCLLNTENIDAHSCETSSLASSDSGDRTNLKRKRKTVELNATVHGSVLRHSILKGISA
QIVSAADRVDAGLPTAIAVSGVIVVGTSHGLALVFDLNQALRLCLGSTATGAEYGAVSAL
SINHDCTRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDDPTLAVCNDSG
GSVFELAFRRVMGMRTCDSRCLFSGSKGEVCCVEPLHTPTDLRDHPITQYSLLAMASLTK
ILVIGLKPSLKVWMTFPYGKTDPTSVPQLAWQYVPIQKVVNPILAFCRGDTVHFLLVKKE
ESGTIHVIKQRQLHLNCDIISLSWMNSRTLVLLSSGEQLQVVDRPSLELLECLDLAEVQL
VYNSSHFKSLATGGNVSQALALVGEKACYQSVCSYAGQIVYLGTKSAHIMTLRNWRERVD
FLLKQERFLDALSLAWSFHEGTAKAVLGLFGDPAKRKGVVADKMVEVLLQFVERSLKKCP
EQGKIQIMEQHFLDVVPVMVDYCLLLQRTDLLFEQVYGRLAENVVARGVFLESLEPYIVS
ERLGCVTAAVMRDLLNHYQDNSRMDSLESCLVHMDVTSLDIQQVVKMCWDNQLYDAMIYV
FNSGMNDYINPMEKLFQVIGPPLKEGKVLTDEQVVMGNKLLVYISCCLAGRAYPLGDIPE
DLVPQVKNQVFEFLIRLHSSEGPQEEEVYPYVRTLLHFDTREFLNVLALVSHTQEVLQET
PQGQTFEDFQNDKQALEYQQRIVDILLKVMVENADFTPSQVGCLFTFLARQLAKPDNTLF
VNRKLFDQVLEFLCSPDDDSRHTERQQVLLELLQVGGVVQFDETRLLGLAEKAEFYQICE
FLYEQKHMYDKIIDCYLRDPLRKEEIFNYIHNLLSMPGYSPEERHCVWDNTLQHIQELVI
IDPSKSADLVAGHFLEEIRPIISSLQEEHLVYQFLRCLLDPREGPHPQAVLRLEPDLHEL
LIGLLCRFNPRELTSFLQTSQDYRLEEAIQVTEQHQHHEATAYLLEKKGDAHGAFQVLLK
TLKERLSSLTPGGEEEEGGGGEGEEPPLQRIEVALSDIIALSDRCSHNLNQQQREVLWFP
LLEAMMSPQTLLKGPDTKNTSEALKELTMKVLNSMSSFISLPAIIQRILQDPVYGKGKLA
EIQGLILGMLETFNYEQTLLETTTSLLNHDLHWSLSHLRAAVSRGLHPRHDHCNICLQQY
KRRHDSPEEIIIFSCGHLYHCQCLQRKGSGLSGERLQGWSCYKCTSNQGGRGGDRVAMET
GRGRTASLAQTRVTSTHSDAGDEAHGKKGLAETTLDPQQSQSWDQLRCLYRGPSRLAILS
ELSHCHGNEKAGLLNPVQPGTGSIFHSENFLLKLSPPPLVEE
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcggctgaatctccagacactcggagtctggtctctgcgtcctcccagctc
aatctcatggagatagacacgatcgacgacaaagagttcgacattcctcaagttgataca
ccccccactttggagagcatccttaacgagccggaggaagaggaggagcccttcattctg
gaggacacctgtctgctcaacaccgagaacattgacgcccactcctgcgagacctcctca
ttggccagctctgacagtggagaccgtaccaacctcaaaaggaagaggaagacagtggag
ttgaacgccacggtgcacggctcggtgctcagacacagcatcctaaagggcatctcagct
cagatcgtctctgccgccgaccgagtagatgctggactgccgacggccatcgcggtgtca
ggggtcatcgtcgtggggacgtctcatggtctggcactggtgtttgatttgaaccaggcc
ctgcgtttgtgtctggggagcacggccacgggggcggagtatggagcagtgtccgccctc
agcatcaaccacgactgtacgcgtctgctctgcggctttgccaagggccagatcaccatg
tgggacctggccaatggcaagttgctgaggaccatcacagacgcccaccctcctggcacg
gctatcttacacgtcaagttcacagatgaccccaccctagcagtgtgtaacgacagtggg
ggatcggtgtttgagctggccttcaggagagtgatggggatgcgtacctgtgactctcgt
tgtctcttcagtggctctaagggggaggtgtgctgtgtggagcccctccacacccccaca
gacctcagagaccaccccatcacacagtactctctgctggccatggcctcgctcaccaag
atcctggtgattggacttaagccgtctctgaaagtgtggatgacttttccctatggcaag
acggaccccaccagtgttccccagctagcctggcagtacgtgcccatccagaaggtggtt
aaccccatcctggccttctgcagaggggacaccgtccacttcctgctggtgaagaaagag
gagtcagggaccatccatgtcatcaaacagagacagctgcacctcaactgtgacatcatc
agtctgagctggatgaactcccggaccctggtgctgctgagcagcggggagcagctgcag
gtggtggaccggcccagcctggagctgctggagtgtctggacctggcagaggtgcagctg
gtctacaacagcagccactttaaatcgctggccacggggggcaacgtcagtcaggcactg
gccctagtcggagagaaggcctgctaccaatcagtgtgcagctatgctggacagatagtc
tacctgggaactaagtctgcccatatcatgactctgaggaactggagagagcgtgtggac
ttcctgttgaagcaggagaggttcctggacgctctctctctggcctggtccttccacgag
ggaaccgccaaggctgtcctggggctgttcggagacccggccaagagaaaaggagtggtg
gccgacaagatggtggaggttcttctccagttcgtggagcgttcgttgaagaagtgtcca
gagcagggcaagatccagattatggagcaacacttcctggacgtggtgcctgtcatggtg
gattactgtctcctgctgcagagaacggacctgctgttcgagcaggtgtacgggcgcctg
gcggagaacgtggtggcccggggcgtgttcctggagagcctggagccctacatcgtcagc
gagcggctgggctgcgtgaccgccgccgtcatgagagacctgctcaaccactaccaggac
aacagcaggatggacagcctggagagctgtctggtccacatggacgtcaccagcctggac
atccagcaggtggtgaagatgtgctgggataatcagctctatgacgccatgatctacgtg
ttcaacagtgggatgaacgactacattaaccctatggagaaactctttcaggtgattggc
ccaccactgaaggaaggcaaggttctcacggatgaacaagtggtgatgggcaacaagctg
ttggtttacataagctgctgtctagcaggacgagcgtatcccctgggggacatcccagaa
gacctggtgccccaagtcaagaaccaggtgtttgaatttctcatccgtcttcactcgtcg
gagggcccacaggaagaggaggtgtacccctacgtgcgcacgctgctccatttcgacacc
cgcgagttcctcaatgtcctcgcgctggtgagccacacccaggaagtactgcaggaaaca
ccccagggacagaccttcgaggacttccagaatgacaagcaggccctggagtaccagcag
aggatagtagacatcctgctgaaggtgatggtggagaacgcggacttcaccccctctcag
gtgggctgtctcttcaccttcctggcccgccagctcgccaagccagacaacacactcttc
gtcaacaggaagctgtttgaccaggttctggagtttctctgcagtcctgatgatgactcc
agacacacagagagacagcaggtgctgttggagttgctgcaggttgggggcgtggtccag
tttgacgagacaaggttactgggcttggcggagaaggcagagttctaccagatctgtgag
ttcctgtatgagcagaagcacatgtatgataagatcatagactgctacctaagagatcct
cttagaaaggaggagatattcaactacatccacaacctgttgtccatgcctgggtacagc
ccagaggagaggcactgtgtctgggacaacacactacagcacatccaggagctggtgatc
attgatcccagtaagtcagcagacctggtggctggtcacttcctggaagagatccggcca
atcatcagcagcctacaggaggaacatctggtgtatcagttccttcgatgccttctggac
ccaagagaaggccctcatccccaggctgtcctgaggctggagcccgacctccacgagctc
ctcatcgggctgctgtgccgcttcaacccccgggagctcacctccttcctccagacctcc
caggactaccgtctggaggaagccatacaggtaacggagcagcatcagcaccacgaggcc
acagcctacctgctggagaagaagggcgacgcccacggagcattccaggtcctgctcaag
accctgaaagagaggctcagcagcctcacccctgggggcgaggaggaagaggggggggga
ggggagggggaggagccacccctgcagagaatcgaggtggccctgagtgacatcatcgcc
ttgagtgaccgctgctcccacaacctcaaccagcaacagagagaggtgctgtggtttcct
ctgctagaggccatgatgtctccacagacactcctgaagggaccagataccaagaacacc
tcagaagcgttgaaggagctcaccatgaaggttctgaacagcatgagcagcttcatctcc
ctgccagccatcatccaacgcatcctccaggacccggtgtatgggaaaggcaagctggct
gaaatacaaggcctcatcctgggaatgctggagacattcaactatgaacagactctgctg
gagaccaccaccagcctgttgaaccacgacctccactggtccctgtcgcacctgcgtgct
gctgtcagcagggggctccacccccgacacgaccactgcaacatctgcctgcagcagtac
aagagacgccacgactccccagaggagatcatcatcttcagctgtggccacctgtaccac
tgccagtgcctgcagaggaaggggagtggcctgtcgggagagaggctccaggggtggagc
tgctacaagtgcacgtccaatcagggagggaggggcggggacagggtcgccatggagacc
gggaggggtcgcactgcttccttggcccagaccagagtcacatccacacacagcgacgca
ggagatgaggctcatgggaaaaagggtttggcagagacgaccctggacccccaacagagc
cagtcgtgggaccagctccgctgcctctacagaggcccctccaggctggccatcctctcg
gagctctctcactgccacggcaatgagaaggcggggctgctgaaccccgtccagccagga
acaggaagcatcttccacagcgagaacttcctgctcaagctgtcccctccgccattggtc
gaggagtag
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