Osmerus eperlanus (European smelt): 134007947 Help Entry 134007947         CDS       T10927                                  Symbol ush2a Name (RefSeq) usherin   KO K19636   usherin Organism oep  Osmerus eperlanus (European smelt) Brite KEGG Orthology (KO) [BR:oep00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:oep03037]     134007947 (ush2a) Cilium and associated proteins [BR:oep03037]  Primary cilia and associated proteins   USH complex and associated proteins    134007947 (ush2a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 Ig_DSCAM-DSCAML_C Pur_ac_phosph_N Galaxin_repeat Motif Other DBs NCBI-GeneID:  134007947 NCBI-ProteinID:  XP_062303693 LinkDB All DBs Position 21:4413261..4488236 Genome browser AA seq 2940 aa AA seqDB search MAPAAPEGVLPPRLERAGPASLLVSWAPPGQANAPELVRYTLLMRLAPHGPLLHLLENVS STYSYTVEGVSPHTEYLLRLVASNTHGHTASRWTSLRTAEDAPGPVDPPVVSQLHPRNAT LSWASPSQPNGVITHYTLYLHSILPANQSDLSTTLPTLTSHQSGPTTTQSTLVAGQSGLN PPLPTNQSNLNTTRTIDQSGGNTFVPASPSGTNPSQLSTTPLGTHPTHNTTQTARVHGNT TQYTFLHLQPYQLYGLQVEACTQAGCSLSGASRPLRTPPAPPEGVPAPQLYSDTPTSVLL SWGAPQKPNGPLEGWVVERRVFRTQQVSQVGRVPPGPVPLSYQDSSSALSPWTSYQYRLL AQTQAGTGTGPWSSVTTRPSRPAGLSPPRVLILGPDSLEVKWIPPLIANGEIDRYEIRLP EPRVSHTEAAALIATVTDLVPYTNYSVTVLACSSGGGHVGGCTESPPTLVTTLPTVPQGL SPLVVVPISESFLAISWQPPSRPSGPNISYELRRRRMLQPLAPPRPPQTPPARPDLWLSV YTGPELFHEDKGLSRFTWYQYQLVVHNQVGSSSGEEVTGVTQAGVPLRPPALSAWPLNHT HVLVNWTEPSLQDLQGRVELHTVTVISSDLEERTLTSPPGVVSMVIGDLRPSTHYRVSLQ VFNGAHNISSPEVLVLTADGEPEGVCVPEVVPVNSSAVRVLWSPPLSPNGAITSYAIYLD GHRRGNADNTSGSYLLGGLLPFTVYEIQVEVCTVYACVKSNTTQMTTVEDLPVDIPPPHT HVLSPRSVRLAWSSPGRPGGVMLGYEVLRTILRPCGGPGAGLTPQGGQGSEVMCSYLQCS TQQGVCGTACYQPDTQVCCGGVAYNRAHPHLCCEGRYLLSPNSSHTACCGGRLLPPLPNH QCCGGYYVVVASGEMCCPDPEQGRVAVGVGDACCGGVPFSQAGGQLCCGGGLHDGYGSQC CGGRLVPDSLVCCEGAEGSSTHTPAAGLLCCGEDYVNSSTTLCCVGQDGSPTMHPAGNAT VTLQCCGSEVIRQEEECCNGVGYDPRRHVCADRPTPGLLLQEGCRTSALCPIAAASTSYC GSCDLDPSEAVCTWVHDARTPSHTSTHAPVQARAALRAPTQHTARNTLYTTPATRSLLTA DTHQNTPLSQHSEPTLCPSHDDVVYSGGANRYSYTDSDLEPYTSYQYRVRAWNSFGRGSS PVTTVTTNEDVPWGVSPPRWNRLGDRDDIIQLHWQAPAKPNGDITHYVILRDGQERYRGD ETTFTDVGGIRPFQEFRYKLRACNAAAGCTDSLEVLAVTVQGVPEGVRSPTVTALGPRSL WLHWSVPSKPNGVVRLYHINQTGTGTIHTHTHGDRNHTITELQPYSDYSFVVVACTVVGC GSSQPATGRTLQDAPTGVWSRPDHVVLNSSAVQLFWSAPLRLNGQLTRYRLLRDGAPVYT GDHRASNYTDSHLQPNSRYVYELEASTGGGAGLSDRYIVQTPVSSPLGIPPPYNITVSGP HSLFVSWAPPAHFNTSQPMNYNILLSLGSDPVIMRAAGGNQHLSVADLEPFTTYRVRVQA CQSEGCGVGEGVSVRTSEDPPEQLDPPSVRAVGPRVMEVIWVPPRKPNGLITSYFIHRRP MGAQEELLVFIWSSGLLEFIDASDALQPFSQYQYRVLAHNSRGSSHSKWTTATTLEAEPE GMAPPTATPTGAYSVQLNWAVPEQPNGLISQYRLLYRKHHPDPTLNTSTITALTVTGGVL RASVYGLDPYSEYSVCVEAVNTAGSVISPWVGTRTLQASPAGLSSIALEQREQGRALLLT WDPPQAPNGVITMYNLYNEDNLEFSGLSRHFLFRRLEPFSSYSLVLEACTPAGCTRTPPQ RVTTAPAPPTSQPPPMPLSIGPDSVELAWSPPAQPNGPIGQYVLLGRGLEEGSGRSWDEE AMGGGVLHRQNSIQGSRFSHTVTGLQPWSQYQFSIRSENPAGYAHSPWVTVTTRQAPPRG LAPPKLHHIRDRPSELLVSWAPPLETNGVLVSYRLHRDNLTFSFSLDPGVLSYTDHGLQA FSSYQYSVTACNTAGCITSPSVHITTLQAPPAAVVPPTFPSITAHSINASWSVPLVQNGE VTQYVLQVNSEEVYRGRGLHAEMTGLEPHTLYWLVLLACTNGGCTPSPPIPAMTQEAPPT GLPPPSLKVTGPQSLEVTWEPPERPNGVVKGYELRRDGEVIYIGMETRYHDFTLLPSVEY GYSVTANNSRGSVTSGVAKARTRASAPSGVSPPSLQPLGPRQVRVTWEPPVRPNGEIVSY TVYQRDLALLATLSVSLGREDSALSGRSITLQDLKPHHRYEVRVEACTELGCASSDWASV LTLESPPAGQNSPLLDLQTDQQGLQTVFQLSWSPPSQPNGRVLHYEVYRRSEQSTEDLGG AVLVYRNVSTSCRDAGLQPYTAYQYQVLAVNSAGHSSSPWANGRTGPAPPDGVNTPIFLR ILATSAVVDIVPPARPNGIVSIYRVFSRHQDTHTLLSEGTSLQQTLHGLSPYSKYWVYVE ACTCYQCCSPGPLAELHTQAAPPTGQPSPRLLTLTSRSTQLEWDWPLNPNGVIESCELHV RSTCPHPPQPVPAPCVTGPVETCFFGRRRSNNVTGLQPYTSYDFRAACFNNMGSTASEWT TVTTLTEAPQYVSALVVGSNLTMVWLDWGSSFSLHGALREYTLTESKLRIYSGFHTHLHI PLTSQKTLSFQVTCSTEAGSASTPTVRYSPATGIGPPEPTPGWAPGQQGVGGSGGAVYSE LWFILLLSLLGLLLLALLLGLLLHWALRKSPLVRERPPLVPLQKRSQRDRDPFMFDTVAD CLEASTVTLKSFTLYSEGVAESKIGGDGSRFSPMSVLRVPSQSELNYSYSQSSLHRSVSQ LIGGQDRKSLMGDGGWDNPMMQGHDSGLYVEEEEEDEFGDAVKAFSSVRKEHTMFTDTHL NT seq 8823 nt NT seq  +upstreamnt  +downstreamnt atggcccctgcagctccagagggagtgctgccccccagactggagcgtgccggccctgcc agcctgctggtgtcctgggcccccccgggccaagccaacgccccagagctggtccgctac acactgctgatgaggctggccccccacggacctctgctccatcttctggagaacgtgagc agcacctacagctacacagtggagggtgtgtctccccacacagagtacctgctcagactg gtggcctccaacacacacggacacacagccagccgctggaccagcctacgcactgctgag gacgctccagggcctgttgacccccccgtggtgtcacagctccaccccaggaacgccacc ctgtcctgggccagccctagccagcccaacggggtcatcactcactacactctgtaccta cactccatccttcctgctaaccaatcagacctcagcaccacattgcctaccttgacctct caccaatcaggtcctaccaccacacagtcaaccctggttgctggccaatcaggcctcaac ccacccctgcctactaaccaatcaaacttgaatactacccggaccattgaccagtctggt ggcaacacatttgtacctgcttccccctctggcaccaaccccagccagctttccactacc cccctcggaacacaccccacccacaacaccacccagacagcccgtgtccatggtaacaca acccaatacactttcctccacctccagccctatcaactgtacggcctgcaggttgaggcg tgtacccaagcagggtgctctctgtctggggcgtcccggcccctgcgcaccccccctgct ccaccagaaggggtcccggccccccagctctactcagacacccccacctcagtcctgctc tcctggggggcaccccaaaagcccaacggacccctggagggctgggtggtagagaggagg gtgtttaggacccagcaggtctcccaggtgggtcgggtcccgccgggaccggttcccctc tcctaccaggacagctcgtcggcgctgagcccttggacctcctaccagtaccgcctgctg gcccagactcaggctggcaccggcaccgggccctggagctccgtcaccaccagaccctct cgtcccgccgggctcagcccacccagggtgctcatcttggggccagactcgctggaggta aaatggattccaccactaatcgcgaacggagagatcgaccgctacgagatccgactccca gagcctcgtgtctcccatactgaagcagcggccctgatcgccacggtgaccgacctggtt ccgtacaccaactacagtgtgacggtgctggcctgctcctctggtggcggccatgttgga ggctgcaccgagagcccgcccactctggtgactacattacccacagtgccgcagggcctg agcccgctggtggtggtgccaatcagcgagtccttcttggccatatcctggcaaccaccc tccaggcccagcggacccaacatcagctatgagttgcggagacgtagaatgctgcagccc ctggcccccccgcgccccccccagaccccgccggcccgcccagatctctggctctctgtg tacacgggccccgaattgttccacgaagataagggccttagcaggtttacctggtaccag taccagctggtggtccacaaccaggtgggcagcagctcaggggaggaggtgacaggggtg acccaggcaggagtgcccctccgtccccccgccctctccgcctggcctcttaaccacacc catgtcctggtcaactggaccgagccttctttacaggaccttcagggcagagtggagctc cacacagtcacggtcatctcctccgatcttgaggagcgaactttgacctctcccccaggg gtcgtctccatggtgataggcgacctgcggcccagcacgcactacagggtctccctccag gtgttcaacggagcccacaacatctccagccccgaggtccttgtcctcacagcagacgga gagcctgagggagtgtgtgtcccggaggtagtgccagtgaacagcagtgccgtgcgagtc ctgtggtctcctcccctgtctcccaacggtgccatcaccagctacgccatctacctggac gggcatcgccgtggcaacgctgacaacacctccgggtcgtacctgctgggagggctgctg ccattcactgtctacgagatacaggtggaggtgtgcactgtatatgcatgtgtgaagagc aacactacccagatgaccacagtagaggacctccctgttgacatccccccaccacacaca cacgtgctcagtcccaggtcagtcaggctagcgtggtcgtcccctggccgtcctgggggg gtcatgttggggtacgaggtgctgagaacgatccttcggccctgtgggggaccaggggcg gggttgacgccccagggaggccaggggtcagaggtcatgtgctcctacctgcagtgctcc acccagcagggtgtctgtgggacggcctgctaccagcctgacacacaggtgtgctgtggg ggtgtggcctacaacagggctcacccccacctgtgctgtgaggggcgttacctgctctct cctaactcctcccacaccgcgtgctgcggggggaggctcctcccacccctccccaaccac caatgctgcggaggatactacgttgtcgtagcttctggagagatgtgctgcccagaccct gagcagggccgtgtggcggtgggtgtaggggatgcttgctgtgggggggtccccttctcc caggctggggggcagctgtgctgtgggggagggctccacgacggctacggctctcagtgc tgtgggggccgtctcgtaccagactccctggtctgctgtgagggggccgagggaagctcc acacacactcctgctgcaggtcttctttgctgtggtgaagactacgtcaactcctccacc acgctgtgctgtgtcggccaggatggctctcccacaatgcaccctgctggaaacgccacg gtgaccctacagtgctgcgggtcagaggtcataagacaggaagaggaatgctgtaacggc gtgggctacgacccccgcagacacgtgtgtgcggaccgcccaacacccggactgcttcta caggaggggtgcagaaccagcgctctgtgtcccatagctgccgcttccacctcctactgt gggtcatgtgacctggacccttctgaagccgtctgcacctgggtccacgacgcacgcaca ccgtcacacacgtccacgcacgcacctgtgcaagcacgcgccgccttacgcgcacctacg cagcacacagcacgcaacaccttgtacacgactcccgccacacgctctctcctaacggct gacacacaccagaacacacccctgtctcaacactcggagcccaccctctgcccctcccat gacgatgtggtctacagtggtggggccaacagatacagctacacggactctgatctggag ccctacaccagctaccagtacagagttagagcttggaacagctttgggcgaggctccagc cccgttaccacggtgaccaccaatgaggacgtgccgtggggagtgtccccaccccgctgg aatcgcctaggtgaccgtgatgacatcatacagctacactggcaagctccagccaagccc aatggtgacataacccactatgtgatcctgcgtgacggacaggagcgttaccgcggtgac gagaccacattcacagacgtgggcggaatacgtcccttccaggagttccggtacaaacta cgggcatgcaacgctgccgccggctgcactgacagcctggaggtcttggcagtaacagta cagggggttccagagggggtccgttctcccacagtaacagctctgggtccaaggtcgtta tggttacactggtccgtcccttccaagcccaacggtgtggttcgcctctaccacatcaac cagaccggcaccggaaccatacacacacacacacatggagacaggaaccacactatcaca gagttgcagccctactctgactacagctttgtagtagtggcctgtaccgtagtgggctgt gggtccagccaaccagcaacgggacgcactctgcaagatgctcccacaggggtgtggtcc agaccggatcatgtggttctgaactcctcagcagtacagttgttctggtccgctccgctt cgtcttaacggccagctgacccgttaccggctgctgcgtgacggtgctcccgtttacacc ggtgaccaccgggcctcgaattacactgactcacacctgcagcccaacagcaggtatgtg tatgagttggaggccagcactgggggtggagctggtttgagtgacaggtacatcgtccag acaccggtctcctcccctctgggaatcccacccccctataatatcactgtctccggccct cactctctctttgtctcgtgggcacccccagcccatttcaacaccagccagccaatgaac tacaacatcctgttgagcctaggaagtgacccggtgattatgcgagcggcgggggggaac cagcacctcagtgtggcggatctagagcccttcaccacctacagagtcagagtgcaggcc tgccagtctgagggctgtggggtgggggagggggtgtctgtgcggacctcagaggacccc cctgagcagctggaccccccctcagtacgggcagtaggacccagggtcatggaggtgatc tgggtcccacctcgcaaacccaacgggctcatcacttcctacttcatacacagacgacca atgggagcgcaggaggagttgctggtgtttatctggtccagtggattgttagagttcatt gatgcaagtgacgccctgcagcccttcagccaataccagtacagggttctcgcccacaac tccagaggttcctcccacagtaaatggaccacagccactaccttggaggcagagccagaa ggcatggctcctcccactgcaactcctactggtgcctactcagtgcagctgaactgggct gttccagaacaacccaacggtctgatatctcaataccgtctgctctacaggaaacaccat ccagaccccacactcaacacctccaccattactgccctgactgtaacgggaggtgtgttg agggccagtgtgtatggtctggacccctacagtgagtatagtgtgtgtgtggaggctgtg aacactgccggaagcgtgatcagcccttgggtgggcactaggaccctgcaagcatctccg gctggcctgtcctccatcgccctggagcagagagagcagggaagagccttgctgctgacc tgggaccccccacaggctcccaacggggtcatcacgatgtataacctgtacaacgaggac aaccttgagttcagtggtctgtctcgtcacttcctgttccgccgtctggagccgttctcc tcctactcgctcgtcctggaggcatgcacccccgccggctgcacccgcacccccccgcaa cgcgttaccacggcaccggccccccctacatcccagcccccgcccatgcccctctcgatt ggtccagacagcgtagaattagcctggagcccgcccgcccagcccaacggaccaatagga cagtatgtgctgctggggcggggcctggaggagggcagtgggaggagctgggacgaggag gccatgggaggaggggttctgcacagacagaactccattcagggttccaggttctcccac acagtgacgggcctgcagccctggagccaataccagttcagcatccgctctgagaaccct gctggatatgcccacagcccctgggtcaccgtgacaaccagacaggccccccctcgtgga ctggcgccccccaagctccaccacattagggaccgcccctcggagctcctggtgtcgtgg gctccacccctggagaccaacggggtcctagtgtcctaccgtctgcacagagacaacctg accttctccttcagcctggaccctggagtgctgagctacaccgaccatggcctgcaggcc ttctcctcctaccaatactctgtcactgcctgcaacactgccggctgcatcaccagcccc tccgtgcacatcactaccctgcaggccccccccgctgcagtggtacctcccacattcccc agcattacggcccatagcatcaacgcctcctggagcgtaccactggtccagaacggggaa gtgacgcagtacgtgctgcaggtcaacagtgaggaggtgtaccgtggacggggcttacac gcggagatgacgggcctcgaaccgcacactctctattggctcgtcctattggcttgcact aatggggggtgtacccccagcccccccatccccgccatgacccaggaggcccccccgacc ggactgccccccccttctctcaaggtcaccggcccacaatccctagaggtgacctgggaa ccaccggaacgccccaacggcgtcgtcaagggttacgagctccgcagggacggcgaggtg atctacatcggcatggaaacgcgttaccatgacttcacgctgttgccgagcgtggagtac ggttacagcgtcactgctaacaacagccgtggctcggtgaccagcggagtggccaaggct cgcacgcgggcctcagcgccctctggtgtcagccccccatctctgcagcctctgggacct cgacaggtgagggtgacgtgggagcccccagtgcgtcctaacggggagatcgtcagctac acagtgtaccagcgagacctcgccctcctcgccacgctcagcgtctccttgggacgggaa gacagcgccctctctggacgcagcataacactgcaggatctgaaacctcaccacaggtat gaggtgagggtggaggcatgtacagagctgggctgtgcctccagtgactgggcgtcagtg ctcactctcgagtcaccccctgctggacagaactcaccactgctggatctacagacggac caacaaggcctgcagacggtcttccagctctcctggtcccccccgtcccagcctaatggt agagtcctgcactatgaggtgtaccgcagatcggagcagtccactgaggatctcgggggt gcagtgctggtgtacaggaacgtttcaacatcatgtcgtgatgccggacttcaaccctac acagcctaccagtaccaggtgttggctgtaaactctgctggtcactcaagtagcccatgg gccaatgggagaacaggacccgcccctcctgatggggtgaacacacccatcttcttgcgt attctagcaacctcggcggtggtggacatcgtccctcctgccagacccaacggcatcgtc agtatctacagggtgttttctcgtcaccaggacacacacactctgttatcagaagggaca tccctccagcagactctccatggtctgagcccctactctaagtactgggtgtatgtggag gcctgtacctgctaccagtgctgcagcccgggccccctggcagagctgcacacccaggcc gccccccccacgggccagcccagccctcgcctgctcaccctcacctcccgctccacacag ctggaatgggactggccgctcaaccccaacggggtcatcgagagctgtgagctgcatgtc cgctccacctgcccccatcccccgcagccagtccctgccccctgtgtgacgggaccagtg gagacctgtttctttgggcgaaggcggagcaacaacgtgacaggccttcagccctatacc agctatgacttcagggctgcttgtttcaacaacatgggcagcactgcctcagagtggacc acagtgacaacactaaccgaggccccccagtacgtgtcagcgttggtggtaggcagcaac ctgaccatggtgtggctggactggggctccagcttctccctgcatggggccctgagggag tacactctgacggagagcaagctgaggatctacagcggcttccacacgcacctgcacatc cccctcacctcacagaagaccctctctttccaggtgacctgtagcacagaggcaggcagt gccagtactcctactgtcagatacagccctgccactggcataggcccacccgagcccacc ccaggctgggccccagggcagcagggtgtgggtgggtctggaggggcggtgtactcggag ctgtggttcatcctgctgctgtccctgctggggctgctgctgctggctctgctgctgggt ctgctgctccactgggccctgagaaagagccccctggtcagggagaggccccccctggtg cccctgcagaagaggagccagagggacagggaccctttcatgtttgacacagtggcggac tgcctagaggccagcaccgtcacgttaaagagcttcaccttgtactctgagggcgtggca gaatccaagattggtggcgatggctcccgcttcagcccaatgtccgtgctccgtgtgccc agccaatcagagctcaactactcctactcccagagttccttgcaccgcagtgtgagccag ctgattggtggacaagacagaaagtccctgatgggggatgggggctgggacaaccccatg atgcaggggcacgacagcgggctgtatgtcgaggaggaggaggaggatgagtttggcgat gcagtgaaagccttcagctcggtgaggaaggagcacaccatgttcacagacacacacctg taa

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