Osmerus eperlanus (European smelt): 134008009
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Entry
134008009 CDS
T10927
Symbol
smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
oep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134008009 (smarce1)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134008009 (smarce1)
PBAF complex
134008009 (smarce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Motif
Other DBs
NCBI-GeneID:
134008009
NCBI-ProteinID:
XP_062303748
LinkDB
All DBs
Position
2:complement(4709604..4715614)
Genome browser
AA seq
456 aa
AA seq
DB search
MSKRPSYAPPPAPTPTTQLPSAPGFVGYNPYSHLAYNNYRLGGNSGGSSRNSSGITVPKP
PKPPDKPLMPYMRYSRKVSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNE
YEAEKIEYNDSLKAYHNSPAYLAYVNAKNRAEAALEEESRQRQTRMEKGEPYMSIQPAED
PDDYDDGFSIKHTAAARFQRNHRLISDILSEIVVPDVRSVVTTARMQVLKRQVQSLMVHQ
RKLEAELLQIEDRHQDKKRRFLETTDSFNTELKRLCSQKVEVDMEKLAAEMAAAEEAARR
RVEEREREAAEQAEKAAQEQQEQADKVAATSPSASQPSNPDQSPTATPPTQAPASESKEE
GDQPTPMETDEAAPAELSDPQPPSEEVTPVPAEKPPAPPSEPAESATTDEGTNDSTALSE
SSSEAPAPPAPPPAPEATPPTPTSTPAEEPPPSQPQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagaccttcctatgcccctccccctgcccccactcccacaacacaattgccc
tccgccccagggtttgtgggctacaacccttacagccatctggcctacaacaactacagg
ctgggagggaattccggaggcagcagcaggaattcctcaggaatcactgttcccaagccc
cccaaacctccagacaagccgctgatgccttacatgcggtacagccggaaggtaagcagg
aaggtatgggaccaggtgaaagcttccaacccagacctgaagctatgggagatcggtaag
atcatcggagggatgtggagggacctgacggacgaggagaaacaggactatcttaacgag
tacgaggctgagaagatcgagtataacgactccctgaaggcctaccacaactctccggcc
tacctcgcctacgtgaacgccaaaaaccgcgcggaggccgcgctggaggaggagagcaga
cagagacagacccgtatggagaagggcgagccctacatgagcatccagcctgcagaagac
cccgacgactacgacgacggcttctccatcaagcacacggcggcggcgcgcttccagagg
aaccaccggctcatcagcgacatcctgagcgagatcgtggttcccgacgtgcgctccgtg
gtcaccacggcccgcatgcaggtcctcaaacggcaggtccagtcgctgatggtgcaccag
aggaagctggaggcggagcttctgcagatcgaggaccgtcaccaggacaagaagaggaga
ttcctggagaccaccgactccttcaacactgagctcaaacggctgtgcagccagaaggtg
gaggtggacatggagaagctggcggcagagatggcggcggcggaggaggcagccaggcgg
agggtggaggagagggagcgggaggcggccgagcaggcggagaaggcggcacaggagcag
caggagcaggcggacaaggtcgccgccacgtcgcccagcgcctcgcagcccagcaaccct
gaccagagccccaccgccacaccccccacccaggctcctgcctcggagagcaaggaggag
ggtgatcagcccacccccatggagacagacgaggcggcgcccgcagagctatcggacccc
cagccgccgtctgaagaagtcacgcccgtccccgcagagaagccgccggcgccgccctcc
gagccggcggagagcgcaaccacggacgagggcaccaacgacagcaccgccctctccgag
agcagctccgaagcccccgctccccccgctccccccccggcccccgaggccacccccccg
acccccacctccacccccgcagaggagcccccacccagccagccacaataa
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