Osmerus eperlanus (European smelt): 134008487
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Entry
134008487 CDS
T10927
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04517
IgSF CAM signaling
oep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134008487
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134008487
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oep04812
]
134008487
Cytoskeleton proteins [BR:
oep04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134008487
Intermediate filaments
Intermediate filament-binding proteins
134008487
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
CH_2
DUF7854
Motif
Other DBs
NCBI-GeneID:
134008487
NCBI-ProteinID:
XP_062303867
LinkDB
All DBs
Position
22:complement(1486598..1540655)
Genome browser
AA seq
2353 aa
AA seq
DB search
MTTVAAEYDHMDLQQQYSDTVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLL
WCQMKTAGYQNVNIRNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLMGVQQQLQAFNTYRTVEKPPKFTEKGN
LVRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLEQLARRFDRKA
AMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAVLAVARELEAE
NYHDIKRITARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEMLHIMDWMDEMKMLL
LSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKNVNATAQKFAIDGDSYKPCDPQVIRD
RVAHMEFCYQELSQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSYERGKDLT
GALRLLSQHRTLEDEMSGRCGHLQHTIAEGEAMATAGHFGAIKIRERIADLQAQWAALES
LAGVRKARLEEALALHQFQADADDVDAWTLDALRIVSSGEVGHDEFSTQALVRKHKDAAA
EVASYRPVIDALHEQAAVLPKDEAESEEVKGRLAGIEERYKEVAELTRLRKQALQDALAL
YKMFSEADACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQI
ARQLMHNGHPSEKDIKVQQDKLNNRWSQFRDLVDQKKESLNSALGVQNYHLECNETKSWI
REKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGEAERLAEEHPDQAK
AITGRLAEINAVWEEMKNTLKNREESLGEASKLQQFLRELDDFQSWLSRTQTAIASEDMP
NTLAEAEKLLAQHEGIKNEIHNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGW
NELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLDGAEGAIKKQ
EDFMTTMDANEEKINGVVEAGRRLASDGNINAERIQERASSIDDRHKKNREAAVELLMKL
KDNRDLQKFLQDCQELFLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELQSNKEWLD
KIEKFSGGRKSRNSMGVFTHDGLQLVLEKPETEAVVKEKLSALHKMWEELESTTQTKAQC
LFDANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQMLEKQVEVRQRE
VVELQSQVQALSQEGRDTDEVDGHRQVVEKKFQELLDPLSKRKNFLVASREIHQFNRDVE
DEILWVQERMPIATSTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRCDDIFERSQSLLTED
GPNVEAIRQRLADLQQLWSLVIVETGKRHARLEEAHNAQQYYFDAAEAEAWMSEQELYMM
SEEKAKDEQSSVGMLKKHQIVEQSAEDYAETVHQLSKTSRGLVADGHPESERIGMRQSQV
DKLYAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTML
QERFREFARDTGNIGQERVDAVNRLADELINAGHTDAATVAEWKDGLNEAWADLLELIDT
RTQILAASYELHKFYHDAKEILGRILDKQNKLPEEVGRDQNTVETLQRMHTTFEHDIQAL
GTQVRQLQEDAVRLQSAYAGDKADDIQRRECEVLEAWKSLLEACDGRRVRLLDTGDKFRF
FSMVRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKS
LLARKHYASEEIKDKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQ
EPYLSGREMGQSVDDVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRLQEEEEK
RRKPPTPEPVQESNLLLHREEEPITNGLPSDQDSPRDGVDGEMVNGVAEQNSKDPSPIPS
PTSGRRAKGSQSSTLPTKNQDSPTSQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNHE
MGFYKDNKNASQGIPYHNEIPISLKDAVCDVAIDYKKKKHVFKLRVTDGNEYLFQAKEEE
EMSTWIQAILNAGSLEKVEITPSNQSTPASSRAQTLPATVTLTTEPSPGTGKREKDKEKD
KEKRFSLFSKKKQ
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagtagccgcagagtacgaccacatggacctccagcagcagtacagtgacact
gtcaacaaccgctgggatgacgaatgggacaacgagaacagttcagcccgcctgtttgaa
cgctcacgtatcaaggcactggcagatgagcgtgaggcagtgcagaagaagaccttcacc
aaatgggtcaactcccacctgtccagggtgtcctgccgcatcacggacctgtacatggac
ctgagggatggccgcatgctcatcaaactcctggaagtgctttccggggagaggctgccc
aagcccaccaaggggcgcatgcgcatccactgcctggagaacgtggacaaggccctgcag
ttcctcaaggagcagagagtccacctggagaacatgggctcccacgacattgtggacggc
aaccatcgcctcaccctggggctcatctggaccatcatcctcaggttccagattcaggat
atcagcgtggaaacagaggacaacaaggagaagagatcggccaaagatgcccttttgctc
tggtgtcaaatgaaaactgctggctatcaaaatgtgaacattcgcaatttctccaccagt
tggagagatgggatggcttttaacgcactcattcacaagcacaggccagacttgattgac
tttgacaagctaaagaaatccaatgcccatcataacctacaaaacgctttcaacttggct
gaacagcatctaggcctaaccaagctcctggacccagaagatataagtgtggaccaccct
gatgagaagtcagtcatcacctacgtggtgacatactaccactacttctcaaagatgaag
gctctaaaagtggagggcaagcgtattgggaaggtgctggacaatgccattgagacagag
aagatgattgagaagtatgagtctcttgcctctgatctgctagagtggattgaacagacc
atcattatccttaacaaccgcaagtttgccaactctttaatgggggtgcagcagcagctt
caggccttcaacacctaccgcacggtggaaaaaccccctaagtttactgaaaaaggcaat
ctggtgagggccaacaaccagaaagtatatatgccaagggagggaaaactcatctctgat
attaataaggcctgggagcgactggaaaaggcggagcatgagcgagagttggctctgagg
acagagctgattcgccaggagaaactggaacagctggcccgacggtttgaccgcaaggca
gccatgagggagacctggctgagtgagaaccaacgccttgtttcacaggacaactttggc
ttcgacctgcaggccgtggaagctgcaaccaagaaacacgaagccatcgagacagacatt
gcagcgtatgaggagcgcgtgcaggccgtgctggctgtggccagagagctggaggcggag
aactaccacgacatcaagcgcatcacggccaggaaggacaacgtgatccgtctgtgggag
tacctgctggagctgctgaaggccagacgccagcgcctggagatgaacctgggcctgcag
agggtcttccaagagatgcttcacatcatggactggatggacgagatgaagatgctcctg
ctctctcaggactatgggaaacatttgctgggagtggaggaccttcttcaaaagcatgct
ctggtggaggctgatattgccatccaggctgacagagtaaaaaatgtcaatgctaccgct
caaaagtttgccatcgatggtgatagctacaagccctgtgacccacaggtgatccgagac
cgggtggctcatatggagttctgctaccaggagctgagccagctggccgcagaacgccgg
gctcgccttgaggaatcccgccgcctctggaagttcttctgggagatggcggaggaggaa
ggctggatccgtgagaaggagcagatcctatcttcatacgagcgtgggaaggacctgaca
ggcgctttgcgtctgctgagccagcatcgcaccctggaggacgagatgagcggccgttgc
ggacacctccagcacactatcgccgagggtgaagccatggcgacggcaggccacttcggc
gccatcaagatccgtgagcgaatagccgacttgcaggcgcagtgggcggctctggagtcc
ctcgcgggagtgcggaaggctcgtctggaggaggccctggcgctgcaccagttccaggca
gacgcggacgacgtggacgcctggaccttggacgccctgcgcattgtgtccagtggcgag
gtggggcatgacgagttctccacccaggcactggtcaggaaacacaaggatgcggctgcc
gaggtcgccagctaccggcctgtcatcgatgctctccatgagcaagcagccgtcctgcct
aaagacgaggcagagtcagaggaggtaaagggacgtttggcgggcattgaggagcgctac
aaggaagtggccgagctgactcggcttagaaagcaggccctgcaggatgcactggccctg
tacaagatgtttagtgaggcagacgcctgtgaggtttggattgacgagaaggaacagtgg
ctcaatagtatggagataccagagaaactggaagacctagaagttattcagcacaggttt
gagagtcttgagccagagatgaataaccaggcctctcgtgttgctgtggtcaaccagatt
gccaggcagctgatgcacaatggccacccaagcgagaaggatatcaaagttcaacaagac
aagctcaacaatagatggagccagttcagagatctggtggaccaaaagaaggagtctctc
aattcagcgctaggcgtgcaaaactaccacctcgagtgcaatgagacaaagtcctggatc
cgtgaaaagaccaaggtcatcgagtccactcaggagctggggaacgacctgacaggcgtc
atggcgctgcagcgcaagcttacaggcatggagcgcgacctggccgccatcgaagacaag
ctgggagacttgcgaggtgaggcggagcgtctggccgaggagcacccagaccaggccaag
gccatcacgggccgcctggcagagatcaatgccgtgtgggaagagatgaagaacaccttg
aagaaccgcgaggagtctctcggtgaggccagcaagctgcagcagttcctccgcgagctg
gatgatttccagtcctggctgtcgcgcacgcaaacggccatcgcctcagaggacatgccc
aacacccttgccgaagctgagaagcttctagcgcagcacgagggcatcaagaacgagatc
cacaactacgaggaggattaccagaagatgcgggacatgggggagatggtgacccaaggc
cagacggacgcccagtatatgttcctcagacagaggctacaagcgctggacacgggctgg
aacgaactacacaagatgtgggagaaccggcagaacctgctgtcccagtcccatgcctac
cagctatttctcagagacaccaagcaggcagaggccttcctcaacaaccaggagtatgtg
ttggcccacactgaaatgcctacaactttggatggggccgaaggggccatcaaaaaacaa
gaggacttcatgacaaccatggatgccaatgaagagaagatcaatggtgtggtggaggct
ggcaggagactggcgagcgatggaaacatcaacgcagagcgcatccaggagagggctagt
tctattgatgacaggcataagaagaatcgtgaggcagcagtggagctcctgatgaagctg
aaggacaaccgtgaccttcagaagttcctgcaggactgtcaggagctgtttctatggatt
aatgagaagatgctcacagcgcaagacatgtcgtacgatgaggccaggaacctccacagc
aagtggcttaaacaccaggccttcatggctgaactgcagtccaataaggagtggcttgac
aagattgagaagttttcagggggaagaaaaagcaggaattccatgggggtgttcacacat
gatgggttgcagctagtgttggaaaagccagagaccgaggctgtggtgaaggaaaagctc
tctgctctgcacaaaatgtgggaggagctggagtccaccacccagaccaaggcccaatgt
ctgtttgatgccaacaaggcggagctcttcacccagagctgtgctgacctggacaaatgg
ctgggcggcctggagggccaaatccaatcagacgactacggcaaagaccttaccagcgtc
aacatcctgctgaagaagcagcagatgttggagaagcaggttgaagtccgacagagggag
gtggtggagctccagagccaggtgcaggccctcagccaggaggggagggacacggatgag
gtggacggccacaggcaggtggttgagaagaagttccaggagctgctggatccgctgtcc
aagaggaagaacttcctggtggcgtctcgtgagatccaccagttcaaccgggacgtggag
gatgagattctgtgggtccaagagagaatgccaattgcaacttcgacagatcatggcaac
aatttacagaccgttcaactgcttattaagaaaaaccaaaccttacagaaggaaatccag
ggtcatcagcctcgctgcgacgacatttttgagaggagccagagcctcctgacggaggac
ggccccaacgtggaggcgatccgccagcgcctggccgacctgcaacagctgtggagcctg
gtcatcgtggagacaggcaagcgccacgcccgtctggaggaagcccacaatgctcagcag
tactactttgatgcggccgaggcggaggcttggatgagcgagcaggagctgtatatgatg
tctgaggaaaaggccaaggacgagcagagttcggtgggcatgctaaagaaacaccagatt
gtggagcagtctgcggaggactacgctgaaaccgtccaccagctctccaagacaagcaga
ggcctggtggctgatggccacccagagagtgagagaataggtatgcgccagtcccaggtg
gataaactgtatgccgggctgaaggacctatcggaggagaggagggggaaactggacgag
agattccgcctcttccagctgaaccgtgaggtggacgatctggaacagtggattgcagag
cgggaggtggtggctggctctcacgagctgggacaggactacgagcacgtcactatgctc
caggagcgtttcagggagttcgcccgtgacactggcaacatcggccaggagcgcgtggat
gccgtcaaccgcctggcagacgagctgatcaacgctggtcacacagacgccgccacggtg
gccgagtggaaggacggcctgaacgaggcatgggccgacctgctggagctgatcgacact
cgcacacagatcctcgccgcctcctacgagctgcacaagttctaccacgatgccaaggag
atcctcggacgcatcctggacaagcagaataaacttccggaagaggtgggccgggaccaa
aacacagtggagaccctgcagaggatgcacaccacctttgagcacgacatccaagccctc
ggaacacaggtaaggcagctgcaggaagatgcggtccgtctccagtcggcctatgccggt
gacaaggcagacgatatccagaggcgggagtgcgaggtgctggaggcgtggaagagcctg
ttggaggcgtgcgacggccgcagggtccgtctcctggacacgggcgacaaattccgcttc
ttcagcatggtgcgcgacctcatgttgtggatggaggacgtcatccgtctaatcgaggcc
caagaaaacccaagggacgtgtcatctgtggaattgttgatgaacaaccaccagggcata
aaggcagagattgatgcccgcaatgatagcttcactgcctgcatcgagttgggcaagtct
ttgttggccagaaagcactatgcatcagaagagataaaagataagttactacagctgacg
gacaagaggaaagacatgattgacaagtgggaggaccgatgggaatggttaagactgatt
ttggaggttcaccagttttcaagggacgcgggcgtggctgaggcctggctactaggtcag
gagccctacctgtctggtcgagagatgggccagagtgtggatgacgtggagaaactgatc
aagaggcacgaagcgttcgagaagtcggctgccacttgggaggagcgcttctccgcactg
gagcgtctgacaacgttggagttattggaagtaagaagattgcaagaggaagaagaaaaa
aggaggaagccccccaccccagagcctgtccaggagtctaacctcctactgcacagggaa
gaggagccgattactaatggactgccatcagaccaggactccccacgagacggagtggat
ggtgaaatggtaaatggtgttgcagagcaaaactccaaggacccaagccccattccctcc
cccacctccgggaggagggccaagggcagccagtcgtcaactctgcccaccaagaaccaa
gactcacccacatcccagctagagggcttcctgcaccgcaaacacgagtgggaggggcat
aacaagaaggcctcaagcaggtcctggcataacgtgtactgtgtaataaataaccatgag
atgggcttctacaaagacaacaagaatgccagtcaaggcattccctaccacaatgagatt
cccatcagcctgaaggatgctgtgtgtgatgttgccattgattacaagaaaaagaagcat
gtcttcaagctcagagttacagatggaaatgagtatctctttcaagccaaagaggaagag
gagatgagtacatggatccaggccatcctgaatgcagggtcgctggaaaaggtagagatc
actcccagcaaccagagcaccccagcgtcgagccgagcccagaccctgcccgccaccgtc
accctcactacggagcccagcccgggcaccggcaagcgggagaaggacaaggagaaggac
aaggagaagcgcttcagccttttcagcaagaaaaaacaatag
DBGET
integrated database retrieval system
