Osmerus eperlanus (European smelt): 134008532
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Entry
134008532 CDS
T10927
Symbol
smc3
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04110
Cell cycle
oep04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134008532 (smc3)
04114 Oocyte meiosis
134008532 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134008532 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oep00535
]
134008532 (smc3)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
134008532 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
134008532 (smc3)
Proteoglycans [BR:
oep00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
134008532 (smc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
134008532
NCBI-ProteinID:
XP_062303928
LinkDB
All DBs
Position
22:complement(11563396..11580765)
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AA seq
1216 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVCRELKSKISAMREEKEQLSSERQEQIK
QRTKLELKTKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNMVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAITDKKRQIAAIHKDL
EDTETNKEKNLEQYSKLDQDLNEVKTRVEELDKKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVITGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILTEFNKMNLPGEVTFLPLTKLDVRDTAY
PETNDAIPMISKLRYSVSYDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKDTLARSEDLDVLIDKTEVEIKDHQRS
LERWKNMEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGHKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGGQSQXGEGGTDSERGS
GSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYL
FDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVI
SAEQAKDFVEDDTTHG
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacaggtcattatccagggattccgaagttacagggaccagactgtggtg
gacccgttcagcccaaaacacaatgtcatcgttggacgaaacggatcaggaaaaagtaac
tttttctacgccattcagttcgtgctcagcgatgagttcagccaccttcgcccagagcag
cgcctggccttgcttcacgagggaactggtcctcgcgtcatctctgcttttgtggagatc
atatttgacaattctgacaacaggttgccgatcgacaaggaggaagtttcgctccgacgt
gtcattggagccaagaaggatcagtacttcctggacaagaagatggtcacgaagaacgat
gtcatgaacctcctggagagtgcgggcttctcccgtagtaacccgtactacatcgtcaag
cagggaaagatcaaccagatggccacggctccagactcccagcggctgaagctgctgagg
gaggtggccgggacccgcgtctacgacgagcgcaaggaggagagcatctccctcatgaag
gagacggagggcaagcgcgagaagatcaacgagctgctgaagtacatcgaggagcgtctc
cacaccctggaggacgagaaggaggagctggcccagtaccagaagtgggacaagatgagg
agggcactggagtacaccatctacaaccaggagctcaacgagacccgcgccaagctggac
gagctgtcctccaagagagagacgtgtggagacaagtccaggcagctgcgggacgcccag
caggacgccagggacaaagtggaggagacggagcgtgtgtgtcgagagctcaagtcgaag
atctcggccatgcgggaggagaaggagcagctgagctcggagcgtcaggagcagatcaag
cagaggaccaagctggagctgaagaccaaggacctgcaggacgagctggccggcaacagt
gaacagaggaaacgcctgctgaaggagcgtcagaagctgctggagaagatcgaggagaag
cagaaggagctgcaggagacggagcccaagttcaacatggtcaaagagaaggaggagagg
ggcatcgctagactggcccaggccacccaggagaggacagacctgtacgccaagcagggc
cgcggcagccagttcacctccaaggaggagagggacaagtggatcaagaaggagctcaag
tccctggaccaggccatcaccgacaagaagaggcaaatcgctgccattcacaaggacctg
gaggacacagagaccaacaaagagaagaacctggagcagtacagtaaactggaccaggac
ctgaacgaggtgaagacccgcgtcgaggagctggacaagaagtactacgaagtgaagaac
aagaaggacgagctgcagagcgaaagaaactacctgtggcgtgaggagaacgcagagcag
caggccctggcagccaagagagaagacctggagaagaaacagcagctactgagagcagct
actggcaaggccatcctgaacggcatcgacagcatcaacaaggtcctggaacacttcagg
aggaagggcataaaccagcacgtcatcaccggttaccacggcatcgtcatgaacaacttt
gagtgtgagcctgccttctacacctgcgtggaggtgacagccgggaccaggttgttctac
cacatcgtggagacagacgaggtgagcaccaagatcctgacggagttcaacaagatgaac
ctacccggggaggtcaccttcctgccactcactaagctggacgtccgtgacaccgcctac
cccgagaccaatgatgctatacccatgatcagcaagctgcgctacagcgtgagctatgac
aaggccttcaagcacgtgtttgggaagaccctgatctgccgcagcatggaggtgtccacc
cagctggccagggccttcaccatggactgcatcaccctggagggtgaccaggtgagccac
cgtggggctctgacgggggggtactacgacacccggaagtcccgtctggagctgcagaag
gacatgaggaaggctgaggaggagctgggggaactggaggccaagctcaacgagaacctg
cgcaggaacatcgaacgcatcaacaatgagatcgaccagctgatgaatcagatgcagcag
atcgagacccagcagaggaagttcaaggcgtcccgggacagcatcctgtctgagatgaag
atgctcaaggagaagaggcagcagtcagagaagaccttcatgcccaagcaacgcagtctg
cagagtctggaggccagcctccacgccatggagtccacccgggagtctctgaaggccgag
ctggggaccgacctgctgtcccagctcagcctggaggaccagagacgcgtggacgacctg
aacgacgagatcaggcagctgcagcaggacaacaggcagctgctgaatgagaggatcaag
ctggagggcatcatgaccagggtggagacgtacctgaacgagaacctgcggaagcgtctc
gaccaagtggagcaggagctgaacgagctgagggagaccgaggggggcacagtcctcacc
gccaccacctcggagctggacggcatcaacaagcgcgtcaaggacaccctggcgcgatcc
gaggacctggacgtcctgatcgacaagacggaggtggagatcaaggaccaccagaggagc
ctagagcgctggaagaacatggagaaggagcagaacgacgccatcaaccacgacaccaag
gagctggagaagatgaccaaccggcagggcatgctgctgaagaagaaggaggagtgcatg
aagaaaatccgggagctgggctctctgccccaggaggccttcgagaagtaccagaccctc
accctcaaacagctgttccgcaagctggagcagtgcaacacggagctgaagaagtacagc
cacgtgaacaagaaggccctggaccagtttgtgaacttctcggagcagaaggagaagctg
atcaagcgtcaggacgagctggaccgcggccacaagtccatcatggagctgatgaacgtg
ctggagctgaggaagtacgaagccatccagctcaccttcaaacaggtgtctaagaacttc
tcggaggtgttccagaagctggtcccggggggcaaggccaccctggtgatgaagaagggg
gacgccgaggggggccagtcccagnggggtgaggggggcaccgacagcgagaggggctca
ggctctcagagcagcgtgccctctgtggaccagttcaccggagtgggcatcagggtgtca
ttcacaggcaagcagggggagatgagggagatgcagcagctgtctggagggcagaagtcc
ctggtggctctcgccctcatcttcgccatccagaagtgtgaccccgcccccttctacctg
tttgacgagatcgaccaggcgctggacgctcagcacaggaaggcagtctctgacatgatc
gtggagctggccggccacgcccagttcatcaccaccaccttcaggccggagctgctggag
tcagctgacaagttctacggagtcaagttcaggaacaaggtgagtcacattgacgtgatc
tctgcggagcaggcgaaagacttcgtggaggacgacaccacccacggttaa
DBGET
integrated database retrieval system
