Osmerus eperlanus (European smelt): 134008638
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Entry
134008638 CDS
T10927
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134008638 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oep04812
]
134008638 (spast)
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
134008638 (spast)
Membrane trafficking [BR:
oep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
134008638 (spast)
Cytoskeleton proteins [BR:
oep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
134008638 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
TIP49
AAA_22
AAA_5
Mg_chelatase
IstB_IS21
AAA_16
AAA_14
Vps4_C
AAA_24
DUF815
AAA_2
nSTAND3
NPHP3_N
DUF5906
RNA_helicase
SR-25
Motif
Other DBs
NCBI-GeneID:
134008638
NCBI-ProteinID:
XP_062304099
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Position
22:3390751..3409856
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AA seq
588 aa
AA seq
DB search
MSSTGGRGRKKRGAGSTPEGDTCDQVSLHRRNLDYFSYPLLALFALFRFLAVHCVVLFAW
LCEGLSRAMATRPKTQANQQGNNKVCEDSGERIRNHHKQAFEYISVALRIDEDDKGMFWH
KAKAVQWYKRGITELERGIAIEITGNGEQFERDKRLQAKMTTNLIMAKDRLELLAKLSGP
AQRATYTESTNQSYHNGHLHSVSGTVPKKRDSLTHSSHSLPRPKHTQKPSSSGGYSSHQR
SPSFSGLSSTHTHQPAPQPNINKGKASNRQNFKPPTTTLQKKKDTKNLKNVDSKLANLIL
NEIVDSGSVVKFEDVAGQDLAKQALQEIVILPTLRPELFTGLRTPARGLLLFGPPGNGKT
MLAKAVAMESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEIDSLLCE
RREGEHDASRRLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLRRFAKRVYVALP
TNETRFKLLKNLLGKHGNPLTQKELSQLARMTEGYSGSDLTSLAKDASLGPIRELRPEQV
RNMAANEVRGIIFCDFVESLKKIKRSVGPQSLDLYVRWNKNYGDTTAV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagttccacgggaggaagaggcagaaaaaagagaggcgctggatccacaccagaagga
gacacctgcgatcaggtgtcgctacataggcggaacttggattacttctcttacccgcta
ctggcgttgtttgcgttatttcgattcctcgctgtgcactgtgtcgtgctcttcgcctgg
ttatgcgagggactttctcgagctatggctacaagaccaaaaacacaggcaaatcagcaa
gggaacaacaaggtgtgcgaggacagcggtgagcggataaggaaccaccacaagcaagct
tttgaatacatctctgttgcattaagaatagacgaggatgacaaaggtatgttttggcac
aaggcgaaggccgtccaatggtacaaacggggtatcactgagcttgagagaggcatcgca
atcgaaataacgggaaatggggagcaatttgagcgcgataaacgcctgcaggccaagatg
actacaaatctcattatggcaaaagatcgcctggagcttcttgcaaagctttcagggcca
gctcagagagccacttatacagagagtacaaaccaatcgtaccataatggccatctacac
tcagttagtggcactgttcccaaaaagagggactccctgacacactccagtcactccctt
ccacgaccaaagcacacacagaaaccctcctcttcgggtgggtacagcagtcaccagcga
tctcccagctttagcgggctgtccagcacccacacacaccaacctgccccccagcccaac
atcaataagggtaaagccagcaaccgacaaaacttcaaaccccccacaaccactctgcag
aaaaagaaggacacgaagaacctgaagaatgtggacagcaagctcgctaacctcatcctc
aatgagatagtggacagtggctcggttgtgaagtttgaagatgtagctggccaggatttg
gctaagcaggccctgcaggagatagtcattctgcccacactgaggccggagttgtttaca
gggctacggaccccagcacgaggcctcctccttttcggccctccgggcaatggaaaaacc
atgttggcgaaggcagtggccatggaatccaacgcaacctttttcaacataagtgccgcc
agcctgacctcaaaatacgtaggggagggagagaagctcgtccgagctctgtttgctgtg
gctagagaactgcagccctctataatctttattgatgaaattgacagtctgctctgcgag
agaagagagggggagcacgatgccagcagacgactgaaaacagagttcttgattgaattt
gatggggtgcagtctgggggtgacgaaagggtgttggtgatgggtgctaccaacaggcct
caggaactggatgaggctgttctcaggcgattcgcaaaacgggtgtacgtggctttaccg
acaaatgagacccggtttaaacttctaaagaacctcctgggaaagcatggcaacccgctg
actcagaaagaactctcccagttggcgagaatgacggagggttactctggcagtgacctg
acatcactagctaaggatgcctccctcggccccattcgagagctgcgaccagagcaagtt
cgaaacatggcggcaaacgaggtgcggggcatcatcttctgtgactttgtggagtccttg
aagaagatcaagcggagtgttggcccccagtcactggacctgtacgtgcgctggaacaag
aactacggggacaccacagctgtatga
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