Osmerus eperlanus (European smelt): 134008646
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Entry
134008646 CDS
T10927
Name
(RefSeq) protein jagged-1b-like isoform X1
KO
K06052
jagged-1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04330
Notch signaling pathway
oep04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
134008646
04371 Apelin signaling pathway
134008646
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oep04090
]
134008646
CD molecules [BR:
oep04090
]
Proteins
134008646
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
DSL
EGF_2
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
EGF_3
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
134008646
NCBI-ProteinID:
XP_062304110
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Position
22:complement(4161611..4189765)
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AA seq
1238 aa
AA seq
DB search
MILRRSSLFCAAFSINVLLQCIWIKVSVGSGHFELQIISMQNVNGELQTGLCCDGSRNAA
DHKCTRDECDTYFKVCLKEYQLKVYSAGPCSFGSASTPVVGGNNFSLRNPRSDKSRIVLP
FSFAWPRSYTLIVEALDFNNDSSTGSVGGEVIERAVQSGMINPSRQWQNVKHNGPVAKFE
YQIRVNCDEHYYGFGCNKFCRPRDDFFGHYDCDHNGNKTCLEGWSGPECNTAICRQGCST
KHGSCKVPGDCKCLYGWQGEYCDKCIPHPGCVYGTCVEPWQCLCDTNFGGQLCDKDLNSC
GTRQPCLNGGTCSNTGPDKHHCACPEGYSGVNCERAEHACLSEPCFNGGSCVETSQGFEC
QCAPGWSGPSCTSNVDECFPNPCSHGGTCQDQVNGFKCTCPSQWTGKTCLIDANECDMDP
CVNSNSCRNLIGSYFCECLPGWMGQNCDTNVNNCQGQCQNGGTCKDVVNGYRCVCPPGFG
SEHCEKDIDQCASGPCLNGGRCQDDTNGFHCLCPSGFYGQLCQLDIDYCMPSLCQNGAQC
FNLATDYFCKCPEDYEGKNCSHLKDHCRTTPCKVIDSCTVAVASNSTLGGVRLISSNVCG
PHGRCRSQAGGQFSCVCQEGFTGAYCHENINDCESGPCQNGGTCIDKVSLYQCICAEGWE
GPNCENNIDDCSKSPCHNCGTCRDLVNDFYCECQNGWKGKTCHSRESQCDEVTCNNGGTC
YDEGDAFKCMCAAGWEGATCNIAKNSSCLPSPCENGGTCVVKRDSFTCVCKEGWEGLTCK
QNSNDCNPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCAYGSTCVDEIN
AYRCLCPPGRTGHRCQEVTGRPCVVNGLVAADGTKWDDECNTCQCNNGKVSCTKIWCGPK
PCRLHGKTRGGDCSSGQSCVPIRDERCFIKPCPNQGECWSPSHRFPVRAECRPDGNCANV
TFTFNKDIMPQGVTVEHICSELRSLYVVRNVSSEYSVSMTCEPALTANNEIHVTISTEDP
RRGKSPIKEITDKIIDLVSKRNGNNTIITAIAEVRVQRRQSHIPSADYLVPLLVSLMIVI
WVLVVASAMLWCLKRRRKQSTHTGVNTQAMPVTAEDNNAVNNVREQLNQIKNPIEKNTPG
SLPSGKDQHHHPHFFEDKNSVNAKIRTNNSDVGTHSEDEESEKRLQKARFPRQPAYTLVD
REDRSLQHTSGKHPNWTNKKDNRDLESAQSLNRLEYIV
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgattttgagacggagttcattattctgtgctgctttttctataaatgtcttactgcag
tgcatatggattaaggtgtctgtgggatcaggacacttcgagttgcaaatcatatctatg
cagaacgtgaatggtgaactccagactggtttgtgttgcgatgggtctcgtaatgctgcg
gatcacaagtgcacgagggacgagtgtgatacctattttaaagtgtgtctgaaggagtac
cagttaaaggtctattcagcggggccctgcagctttggatcggcgtctactcccgtcgtc
ggtgggaataacttttctttgcggaacccgaggagtgacaagtcgaggattgtattgcct
ttcagctttgcttggccgaggtcgtatacactgatcgtggaggcattggacttcaacaac
gactcgtccacgggcagtgtgggaggcgaggtgatcgagagagctgtccagtcgggcatg
atcaaccctagccgccagtggcagaacgtgaagcataatgggccggtggccaagtttgaa
taccagatccgtgtgaattgcgacgagcactactatggctttggttgcaacaagttctgc
cggccccgggacgacttctttggtcactatgactgcgaccacaacggcaacaaaacctgc
ctggagggctggtccggaccagaatgcaacactgctatctgccggcagggctgtagcaca
aaacatggatcctgtaaagtgccaggagattgcaagtgtctgtacggatggcagggggag
tactgcgacaagtgcatccctcaccctgggtgtgtctatggcacctgtgtggaaccatgg
cagtgtctgtgtgacaccaacttcggaggccaactctgtgacaaagatctgaactcctgt
ggcacgcgccagccttgtctgaacggggggacctgcagtaacacagggcctgacaagcac
cactgtgcttgccccgaaggctactccggggtcaactgtgagagagcggagcatgcctgt
ctgtcggagccgtgcttcaacgggggcagctgtgtggagaccagccagggcttcgagtgc
cagtgcgcccccgggtggagtgggccctcctgcaccagcaatgtggacgagtgtttcccc
aatccctgcagtcatgggggcacttgtcaggaccaggtcaacggcttcaagtgcacttgt
ccatcccagtggactggcaagacctgcctcatcgacgccaacgagtgtgacatggatcct
tgcgtcaactccaactcctgccgcaacctgattggtagctacttctgcgagtgccttccc
ggttggatgggccagaactgtgacacaaatgtcaacaactgccagggccaatgtcagaat
ggtggaacctgtaaggacgtggtgaacgggtacagatgcgtgtgtccgccaggctttggt
agcgagcactgtgagaaggacatcgaccaatgtgccagtggcccctgtttgaatggtggc
cgttgccaggatgacacaaatggcttccattgcctatgtccatcaggtttctatggccaa
ctatgtcagctggatatcgattactgcatgccaagcctgtgtcaaaatggtgcccagtgt
ttcaatctggcaacagattacttctgcaaatgtcctgaagactacgagggcaagaactgt
tctcaccttaaggaccattgtcgcaccaccccctgcaaagtgattgacagctgcacagtt
gctgtggcgtccaacagcaccctgggaggggtacgtctcatttcatccaatgtgtgcggt
ccccacgggcgctgccggagccaggctggtggccagttcagctgcgtgtgccaagaagga
ttcacaggcgcctactgccacgagaatataaatgactgtgagagcgggccatgtcagaac
gggggaacatgtatcgacaaagtcagcctgtatcagtgcatctgtgcggagggctgggag
ggacccaactgtgagaacaacattgatgattgcagcaagagcccctgccacaactgtggc
acgtgccgagacttggtgaatgacttctactgcgagtgtcagaacgggtggaagggaaaa
acctgccactctagggaaagtcagtgtgacgaggtgacgtgtaacaacggcggaacatgc
tacgacgaaggggatgccttcaaatgcatgtgtgcagctggatgggagggggccacctgt
aatatagcgaagaacagcagctgcctacccagtccctgtgagaatgggggcacctgcgtg
gtcaaaagagactccttcacttgtgtctgcaaggaggggtgggagggcttgacctgcaag
caaaattccaacgattgcaatccccacccttgctacaacagtgggacttgtgtggacggg
gacaactggtaccggtgcgaatgcgctcctggattcgccggacctgactgcaggattaac
atcaatgagtgccagtcctcgccctgcgcttacggctctacatgcgtagacgagatcaac
gcctaccgttgcctgtgtccacccggcagaaccggacacaggtgccaagaagtcactggg
agaccatgtgttgtcaatggattggtggctgctgatgggactaagtgggatgatgaatgc
aacacctgccagtgcaacaatgggaaggtgtcttgtacaaagatctggtgcggccccaag
ccatgcagactccatggtaaaacgcgcggaggcgattgctcgtccggccagtcctgcgtg
ccgatccgcgatgagcgttgcttcatcaagccctgccctaaccagggggagtgctggtcc
ccctctcatcgcttcccagttcgtgccgagtgccgacctgatggcaactgtgccaacgtc
acatttaccttcaacaaggacataatgccacaaggcgttaccgtggagcacatctgcagt
gagctgaggagcctgtacgtggtgaggaacgtctcgtcggagtactctgtctccatgacc
tgtgagccggcgctaaccgccaacaacgagattcatgtcaccatctcaacagaagatcca
aggagaggcaagtcgcccatcaaggagatcaccgacaagatcattgatttggtcagcaag
agaaatggcaacaacactatcatcacggccatcgctgaggtccgcgtccagaggagacaa
agccacattcccagcgcagattacctggtgcctcttctggtttcccttatgattgttata
tgggtcctggtcgtggcttctgcaatgctatggtgcctcaagcggcggcggaagcagagc
acccacacgggggtcaacacccaggccatgccagtgaccgccgaggacaacaatgccgtc
aacaacgtccgagagcagctcaaccagatcaagaaccccatagagaagaacacccctggc
agcctgccttcaggcaaagaccaacaccaccacccacacttctttgaggacaagaactcg
gtcaacgccaagattcggacgaacaactccgatgtcgggacgcattcagaagatgaggag
tcagagaagaggcttcagaaggcaaggtttcccaggcagccagcgtacacacttgtggac
cgagaggacagaagcctgcaacacacatctggaaaacaccccaactggacaaacaaaaag
gacaacagggacttggagtcagcacagagcttaaaccgattagagtacatcgtatag
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