Osmerus eperlanus (European smelt): 134008666
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Entry
134008666 CDS
T10927
Symbol
xpo1a
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03008
Ribosome biogenesis in eukaryotes
oep03013
Nucleocytoplasmic transport
oep03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134008666 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
134008666 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134008666 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134008666 (xpo1a)
03009 Ribosome biogenesis [BR:
oep03009
]
134008666 (xpo1a)
03016 Transfer RNA biogenesis [BR:
oep03016
]
134008666 (xpo1a)
03036 Chromosome and associated proteins [BR:
oep03036
]
134008666 (xpo1a)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
134008666 (xpo1a)
Ribosome biogenesis [BR:
oep03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
134008666 (xpo1a)
Pre-60S particles
134008666 (xpo1a)
Transfer RNA biogenesis [BR:
oep03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
134008666 (xpo1a)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
134008666 (xpo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
Motif
Other DBs
NCBI-GeneID:
134008666
NCBI-ProteinID:
XP_062304135
LinkDB
All DBs
Position
22:complement(6737873..6749758)
Genome browser
AA seq
1074 aa
AA seq
DB search
MPANMTMLADHAARQLLDFSQKLDINLLDNVVNSMYYDIGSQQRMAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCDGIKKYVVGLIIKTSSDAANV
EKEGVYIAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVQATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVGEVR
LLMVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMT
EKLHNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNK
AIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRR
HFVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKY
MLLPNQVWDSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDM
LNVYKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFV
PPLLEAVLIDYQRNVPAAREPEVLSTMATIVNKLGAHITGEIPKIFDAVFECTLNMINKD
FEEYPEHRTHFFYLLQAVNSQCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQIL
YTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGK
ISTTLSTATPATNQVYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRD
FLVQIKEFAGEDTTDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaaacatgacaatgttggcggaccatgcagccagacagctgcttgacttcagt
caaaaacttgacatcaatctgctggacaatgtggtcaactccatgtactatgacatcgga
tcccagcaaagaatggcccaggaggtgctgaccaaccttaaggaccatcctgatgcctgg
accagggtggacaccatcttggagttctcacagaacatgaagacgaaatactacgcactg
cagattcttgagacggtgatcaaaacacgctggaagattctccccagaaatcaatgtgat
ggaattaagaagtatgtcgtcgggctgataatcaagacctcgtctgacgccgcaaacgtt
gagaaagagggggtgtacatcgccaaactcaacatgattctcgttcagatcctgaagcag
gagtggcccaagcactggcccaccttcatcagcgacattgtgggggccagccgcaccagc
gagagcctctgccagaacaacatgatcatcctcaagctgctcagcgaggaggtgtttgac
ttctccagcggccagatgacccaggtcaaggccaagcacctgaaggatagcatgtgcaac
gaattctcccagatattccagctttgccagttcgtcatggaaaactcccagaatgcccct
ctggtccaggccaccctggagactctgctgcgcttcctgaactggatccccctggggtac
atcttcgagaccaaactgatcagcaccctggtgtacaagttcttgaacgtgcccatgttt
cgcaacgtgacgctgaagtgcctgacggagatcgccggggtgagcgtcaaccagtacgag
gagcagtttgtcaacctgttcaccctcaccatgtgtcagctcaaacagatgctgcccctg
aacaccaacatccggctggcctacgccaacgggaaggacgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctcaaggagcacggccagctcatcgagaagagg
cccaacctgagggagactctgatggaggccctccactacatgctgctggtttcggaggtg
gaggagacggagatcttcaagatctgcctggagtactggaaccacctggcggccgagctg
taccgggagagccccttctccacctccacctccccgctgctctccggcagccagcacttt
gacgtgccgccccgacgccacctctacctgcccgtgctctccaaggtgggggaggtgcgt
ctgttgatggtgagccgaatggccaagcccgaggaggtgctggtggtggagaacgaccag
ggggaggtggtccgcgagttcatgaaggacacagactccatcaacctctacaagaacatg
agggagactctggtgtacctgacccatctggactacgccgacacggagcgcatcatgacg
gagaagctgcacaaccaggtgaacggcaccgagtggtcgtggaggaacctgaacacgctg
tgctgggccatcggctccatcagcggggccatgcacgaggaggacgagaagaggttcctg
gtcaccgtcatcaaggacctgctgggcctgtgcgagcagaagcggggcaaggacaacaag
gccatcatcgcctccaacatcatgtacatcgtgggccagtacccccgcttcctgcgcgcc
cactggaagttcctcaagacggtcgtcaacaagctctttgagttcatgcacgagacccac
gacggcgtgcaggacatggcgtgcgacaccttcatcaagatcgcccagaagtgccggcgc
cactttgtgcaggtgcaggtgggcgaggtgatgcccttcatcgacgagatcctcaacaac
atcaacaccatcatctgcgacctgcagccgcaacaggtgcacacgttctacgaggcggtg
ggctacatgatcggggcccaaacggaccaggcggtgcaggagcacctgatcgagaagtac
atgttgctgcccaaccaggtgtgggacagcatcatccagcaggccaccaagaacgtggac
atcctgaaggacgcggagacggtgcgccagctgggaagcatcctgaagaccaacgtgcgc
gcctgcaaggcggtgggccaccccttcgtggtgcagctggggcgcatttacctggacatg
ctcaacgtgtacaagtgcctgagcgagaacatctcctcggccatccagaccaacggagag
atggtgaccaagcagcccctgatcagaagtatgaggacggtgaagagagaaactctgaag
ctgatctccggctgggtcagccgctccaacgacccccagatggtgggagagaacttcgtc
ccgcccctcctggaggcggtgctgatcgactaccagaggaacgtgccggccgcccgcgag
cccgaggtcctcagcaccatggcgaccatcgtcaacaagctgggcgcccacatcaccggc
gagatccccaagatcttcgacgccgtcttcgagtgcactttgaacatgatcaacaaggac
tttgaggagtaccccgagcacaggacccacttcttctatctcctccaagcggtcaactcc
cagtgtttcccggccttcctctccattcccccggcccagttcaagctggtgttggactcc
atcatctgggccttcaaacacaccatgaggaacgtggccgacacaggtcttcagatcctg
tacacgctgctccagaacgtggcccaggaggaggcggcggcccagagcttctaccagacc
tacttctgcgacatcctgcagcacatcttctctgtggtcaccgacacctcccacacagca
ggcctgacgatgcatgcgtccatcctggcgtacatgttcaacctggtggaggagggtaag
atcagcacgaccctcagcacggccaccccggccaccaaccaggtgtacgtccaggagtac
gtagccaacctgctcaagacggccttcccccatctacaagatgcccaggtgaaggtgttt
gtaacaggcctgttcagcttgaaccaggacatccctgccttcaaagagcaccttcgggac
ttcctcgtccagatcaaggagtttgctggcgaggacaccaccgacctgttcctggaggag
agggaggcatctctacgccaagcccaggaggagaaacacaagatccagatgtctgtccct
ggcatcctcaacccccatgagatccccgaggagatgtgcgattga
DBGET
integrated database retrieval system