KEGG   Osmerus eperlanus (European smelt): 134008666
Entry
134008666         CDS       T10927                                 
Symbol
xpo1a
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep03008  Ribosome biogenesis in eukaryotes
oep03013  Nucleocytoplasmic transport
oep03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oep00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    134008666 (xpo1a)
   03008 Ribosome biogenesis in eukaryotes
    134008666 (xpo1a)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    134008666 (xpo1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oep03019]
    134008666 (xpo1a)
   03009 Ribosome biogenesis [BR:oep03009]
    134008666 (xpo1a)
   03016 Transfer RNA biogenesis [BR:oep03016]
    134008666 (xpo1a)
   03036 Chromosome and associated proteins [BR:oep03036]
    134008666 (xpo1a)
Messenger RNA biogenesis [BR:oep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     134008666 (xpo1a)
Ribosome biogenesis [BR:oep03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    134008666 (xpo1a)
  Pre-60S particles
    134008666 (xpo1a)
Transfer RNA biogenesis [BR:oep03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    134008666 (xpo1a)
Chromosome and associated proteins [BR:oep03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     134008666 (xpo1a)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd BspA_v
Other DBs
NCBI-GeneID: 134008666
NCBI-ProteinID: XP_062304135
LinkDB
Position
22:complement(6737873..6749758)
AA seq 1074 aa
MPANMTMLADHAARQLLDFSQKLDINLLDNVVNSMYYDIGSQQRMAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCDGIKKYVVGLIIKTSSDAANV
EKEGVYIAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVQATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVGEVR
LLMVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMT
EKLHNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNK
AIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRR
HFVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKY
MLLPNQVWDSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDM
LNVYKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFV
PPLLEAVLIDYQRNVPAAREPEVLSTMATIVNKLGAHITGEIPKIFDAVFECTLNMINKD
FEEYPEHRTHFFYLLQAVNSQCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQIL
YTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGK
ISTTLSTATPATNQVYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRD
FLVQIKEFAGEDTTDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq 3225 nt   +upstreamnt  +downstreamnt
atgccagcaaacatgacaatgttggcggaccatgcagccagacagctgcttgacttcagt
caaaaacttgacatcaatctgctggacaatgtggtcaactccatgtactatgacatcgga
tcccagcaaagaatggcccaggaggtgctgaccaaccttaaggaccatcctgatgcctgg
accagggtggacaccatcttggagttctcacagaacatgaagacgaaatactacgcactg
cagattcttgagacggtgatcaaaacacgctggaagattctccccagaaatcaatgtgat
ggaattaagaagtatgtcgtcgggctgataatcaagacctcgtctgacgccgcaaacgtt
gagaaagagggggtgtacatcgccaaactcaacatgattctcgttcagatcctgaagcag
gagtggcccaagcactggcccaccttcatcagcgacattgtgggggccagccgcaccagc
gagagcctctgccagaacaacatgatcatcctcaagctgctcagcgaggaggtgtttgac
ttctccagcggccagatgacccaggtcaaggccaagcacctgaaggatagcatgtgcaac
gaattctcccagatattccagctttgccagttcgtcatggaaaactcccagaatgcccct
ctggtccaggccaccctggagactctgctgcgcttcctgaactggatccccctggggtac
atcttcgagaccaaactgatcagcaccctggtgtacaagttcttgaacgtgcccatgttt
cgcaacgtgacgctgaagtgcctgacggagatcgccggggtgagcgtcaaccagtacgag
gagcagtttgtcaacctgttcaccctcaccatgtgtcagctcaaacagatgctgcccctg
aacaccaacatccggctggcctacgccaacgggaaggacgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctcaaggagcacggccagctcatcgagaagagg
cccaacctgagggagactctgatggaggccctccactacatgctgctggtttcggaggtg
gaggagacggagatcttcaagatctgcctggagtactggaaccacctggcggccgagctg
taccgggagagccccttctccacctccacctccccgctgctctccggcagccagcacttt
gacgtgccgccccgacgccacctctacctgcccgtgctctccaaggtgggggaggtgcgt
ctgttgatggtgagccgaatggccaagcccgaggaggtgctggtggtggagaacgaccag
ggggaggtggtccgcgagttcatgaaggacacagactccatcaacctctacaagaacatg
agggagactctggtgtacctgacccatctggactacgccgacacggagcgcatcatgacg
gagaagctgcacaaccaggtgaacggcaccgagtggtcgtggaggaacctgaacacgctg
tgctgggccatcggctccatcagcggggccatgcacgaggaggacgagaagaggttcctg
gtcaccgtcatcaaggacctgctgggcctgtgcgagcagaagcggggcaaggacaacaag
gccatcatcgcctccaacatcatgtacatcgtgggccagtacccccgcttcctgcgcgcc
cactggaagttcctcaagacggtcgtcaacaagctctttgagttcatgcacgagacccac
gacggcgtgcaggacatggcgtgcgacaccttcatcaagatcgcccagaagtgccggcgc
cactttgtgcaggtgcaggtgggcgaggtgatgcccttcatcgacgagatcctcaacaac
atcaacaccatcatctgcgacctgcagccgcaacaggtgcacacgttctacgaggcggtg
ggctacatgatcggggcccaaacggaccaggcggtgcaggagcacctgatcgagaagtac
atgttgctgcccaaccaggtgtgggacagcatcatccagcaggccaccaagaacgtggac
atcctgaaggacgcggagacggtgcgccagctgggaagcatcctgaagaccaacgtgcgc
gcctgcaaggcggtgggccaccccttcgtggtgcagctggggcgcatttacctggacatg
ctcaacgtgtacaagtgcctgagcgagaacatctcctcggccatccagaccaacggagag
atggtgaccaagcagcccctgatcagaagtatgaggacggtgaagagagaaactctgaag
ctgatctccggctgggtcagccgctccaacgacccccagatggtgggagagaacttcgtc
ccgcccctcctggaggcggtgctgatcgactaccagaggaacgtgccggccgcccgcgag
cccgaggtcctcagcaccatggcgaccatcgtcaacaagctgggcgcccacatcaccggc
gagatccccaagatcttcgacgccgtcttcgagtgcactttgaacatgatcaacaaggac
tttgaggagtaccccgagcacaggacccacttcttctatctcctccaagcggtcaactcc
cagtgtttcccggccttcctctccattcccccggcccagttcaagctggtgttggactcc
atcatctgggccttcaaacacaccatgaggaacgtggccgacacaggtcttcagatcctg
tacacgctgctccagaacgtggcccaggaggaggcggcggcccagagcttctaccagacc
tacttctgcgacatcctgcagcacatcttctctgtggtcaccgacacctcccacacagca
ggcctgacgatgcatgcgtccatcctggcgtacatgttcaacctggtggaggagggtaag
atcagcacgaccctcagcacggccaccccggccaccaaccaggtgtacgtccaggagtac
gtagccaacctgctcaagacggccttcccccatctacaagatgcccaggtgaaggtgttt
gtaacaggcctgttcagcttgaaccaggacatccctgccttcaaagagcaccttcgggac
ttcctcgtccagatcaaggagtttgctggcgaggacaccaccgacctgttcctggaggag
agggaggcatctctacgccaagcccaggaggagaaacacaagatccagatgtctgtccct
ggcatcctcaacccccatgagatccccgaggagatgtgcgattga

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