Osmerus eperlanus (European smelt): 134008793
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Entry
134008793 CDS
T10927
Symbol
helz
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
oep Osmerus eperlanus (European smelt)
Brite
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
134008793 (helz)
3'-5' decay
Other 3'-5' decay factors
134008793 (helz)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134008793
NCBI-ProteinID:
XP_062304305
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Position
22:9749607..9788685
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AA seq
2002 aa
AA seq
DB search
MADRRAEKSCEEASGSIARREYEAAVSHCTDVLLTLGPPAPPSAAPDATTPLRSRALLFR
IAAFLQLKNYDQADEDCKHVLAEELARADGLFQASLRLMLLDGSLQEVASILSKSLFGEP
MNGIVTKDLTRLKMLLSEIEAVNGEMAPEYTEETEEEVQDGWQFRPPPRGVTSSEEYTLC
KRFLELGLCRYGAQCTSAHSQGELMEWQKRYASRLIRLKQHQESKHFTENYMEALIEKWM
NSLSPEKVLSDYLDGVNVETSSSLSVTVTTKKSSHSWTFSLFCKPARKLYRIALLYDAHR
PHFFITGVSAGAEASSGPGPRLRAAPEACQEWTPGEEAPGDNGMDHCTYTVAVGFSTEIF
GTFRQTIVFDFGSEPVLMQRIMVDAASIEDLEHLMQARQQLLMTAKRWDSSCKTIVEFGP
NETVELERSLLARYQIPLSADQLFTQSVLDKSLTRDNYQARLHDLLYIEEIGQYKEVSKF
NIKVNLQLVTSFMLTGISGGAKYAQNGQLFARFKLTETLSEDTLAGRLVMTKVNSVLLLP
LVREWGHQQPPGVKERVYEAVIEEKTKDYIFLRICKDCCEELGLLPDRELQVELQFQLNR
LPLCEMHYALDRIRDTTILFPDASLTPTIPWSPNRQWDEQLDPRLNAKQKEAILAITTPL
SIPLPPVLIIGPYGTGKTFTLAQAVKHILRQDDSRVLICTHSNSAADLYIKDYLHPYVEA
GNEHARPLRVYFRNRWVKTVHPVVQQYCLISNTQYTFQMPGREDILRHRVVVVTLSTSQY
LCQLDLEPGLFSHILLDEAAQAMECETIMPFALASKSTRIVLAGDHMQLSPFVYSEFARE
RNLHVSLLDRLYEHYPPEFPCRILLCENYRSHEAIINYTSELFYDGKLMASGKQPSHKDF
YPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEEMRKKWPVAWGKLDEGSIGVVSPYA
DQVFRIRAELRKKRMHEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAIKRKEQLVE
DSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWEHFISICHENSSL
HGITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRAPQHPHPHAHPQHPHPQASVGKQG
PQQQQSPPKGKGQHANHTELFPPEGFVQPNPAVLMGNPIRAFSPPQGGAPAGMGKSPSPV
QRIDPHTGASILYVPAVYGGNMVMSMPLPVSERVAMVPHPHYDIAGSTHLPWPGYQNRFP
MDPRIMSHQAAMAYNLNLLAQNRGSPIPYGSGGVAHPSPLGMGQQTSPDKELQADPIRNG
KMEGCPKSEQSRLQTPERKSSDMKDKGELDPGGPGRGLDPQTDGMGFPNAALLHRKDPSG
QRPLNYHLAPPNPAFAPGPHPGGRAFQYPVSRLPFRVPPQHPGSSMTQQNQQQHSAQLSP
AYPSSSHNPSFFSGPMPPHRGVQSPGLEGDPGVSEEMGNSIRGPIGHQGGHHPALSQPGR
VNSFGEESQDGGMGDGLDPLALEALTQQARLGQWGDPGPFLQGGVAFPLPQQLAHLAQPG
LARFPPQLLRANWRMSASMEEEAGAAGPPFSRYPGLLREMPPQEQMDPRDPTEMQPPPQS
RLLQYRQVQSQSRSPGDPSSPSASTANHTSSFPPCPYPLDPSRELDLLGNPALQPHPGNP
LYNPNAYPHSAHQPQGHSTTPPPAQVKYLLQEAQWPHGGAAGGAQNHMLGQGQNQSFPYG
LPVMAHPSRQEQVHLMQLHQQQQQQQQQQQQQQQGQGPGQESYHPLSPRTAAATALHNVE
EYEPRGPGRPLYQRRISSSYPDETASAQAPPPCPADLQEHPHQHGHPHAPYGYPPPELWP
GGGPPGPFHNIPCNGASTLQHRDLIAASSKALRQAEEQMKAEAAAAAAPQPPPHSLQHLG
QFPPLMPNSKQQQPPSEPGQSPGGSQSLSKPPTMSYASALRAPPKPRARPEQVKKNSDPL
SLLQELSIGSSNGSNGYYSYFK
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggagagcggaaaagtcatgtgaagaagctagcggatccatagcgaggcgg
gagtacgaggcagccgtcagccactgcaccgacgttctgctgaccctcggacccccggcc
ccgcccagcgctgcccccgatgccaccacgcccctccgcagccgcgccctcctcttcagg
atcgccgccttcctgcagctgaaaaactatgatcaagctgacgaggattgcaaacacgtg
ctggctgaggagctggccagggcagacgggttgttccaggccagcctgcgcctcatgctg
ctggacggtagcctgcaggaagtggccagcattctctccaagtccctgttcggagagccc
atgaatggaatcgtcacaaaggacctgactagattaaaaatgcttctctccgaaattgaa
gctgtgaacggggagatggcgccagagtacacggaagagacggaggaagaggtgcaggac
ggctggcagttccgcccccctcccagaggagtgaccagcagtgaggagtacacactgtgc
aagaggttcctggagctgggcctgtgtcgctacggggcccagtgcacctcggcccactcc
cagggggagctgatggagtggcagaagcgctacgcctcgcgcctcatccgcctcaagcag
caccaggagagcaagcacttcaccgagaactacatggaggccctcatcgagaagtggatg
aactccctctcgcccgagaaagtgctgagtgactatctggacggagtcaacgtggagacc
agctccagcctgtcggtgaccgtcaccaccaagaagtcctcccactcctggaccttctcc
ttgttctgcaagccggccaggaagctgtaccgcatcgccctcctgtacgacgcccaccgg
ccccacttcttcatcaccggcgtgtcggccggcgccgaggcgtcctcggggccgggcccc
aggctgcgggcggcgcccgaggcctgccaggaatggacgccgggcgaggaggcgccgggc
gacaacggcatggaccactgcacgtacacggtggcggtgggcttcagcaccgagatcttc
ggcaccttccgccagaccatcgtcttcgactttggctcggagcccgtgctcatgcagcgc
atcatggtggacgccgcctccatagaagacctggagcacctgatgcaggccaggcaacag
ctcctgatgacggccaagcgctgggactcgtcctgcaagaccattgtggagttcggcccc
aacgagacggtggagctcgagcgcagcctgctggcccgctaccagatcccgctgtcggcc
gaccagctgttcacccagtcggtcctggacaagagcctgacccgcgacaactaccaggcc
cgcctccacgacctgctctacatcgaggagatcggccagtacaaggaagtcagcaagttc
aacatcaaggtcaacctccagctggtcaccagcttcatgctcacgggcatctccggcggg
gccaagtacgcccagaacggccagctcttcgcccgcttcaagctgaccgagacgctgtcg
gaggacacactggcgggccgcctggtcatgaccaaggtcaactcggtcctcctcctgccc
ctggtgcgggagtggggccaccagcagcccccgggggtcaaggagcgcgtgtacgaggcg
gtgatcgaggagaagaccaaggactacatcttcctgcggatatgcaaggactgctgcgag
gagctgggcctgctgcccgacagggaactacaggtggagctgcaattccagttgaaccgc
ctgccgctgtgtgagatgcactacgctctggaccgcatcagagacaccactatcctgttc
cctgacgccagcctcacccctaccatcccctggagccccaacaggcagtgggacgagcag
ctggacccgcggctcaacgccaagcagaaggaggccatcctggccatcaccacgcccctc
agcatccccctgccccccgtgctcatcatcggaccctacggcacgggcaagaccttcacc
ctggcacaggccgtcaagcacatcctcaggcaggacgacagcagagtcctcatttgcacc
cattccaacagtgcggcagatctgtacataaaggactacctacatccgtacgtggaagca
ggaaacgagcacgccagacctctcagggtatacttcaggaaccgctgggtgaagacggtc
cacccggtggtgcagcagtactgtctgatctccaacacacagtacacgttccagatgccc
gggagggaggacatcctcaggcatcgcgtggtggtcgtcaccctcagcacctcccagtac
ctctgccagctcgaccttgagcccgggctcttctcccacatcctgctggacgaggcagcc
caggccatggagtgtgagaccatcatgcctttcgccctggccagcaagagcacccgcatc
gtgctggccggagaccacatgcagctcagcccgtttgtgtacagcgagtttgcgcgggag
cgcaacctgcacgtgtctctgctggaccggctgtacgagcactatcccccagagttcccc
tgccgcatcctgctgtgtgagaactaccgctcccacgaggccatcatcaactacacgtcg
gagctgttctacgacgggaagctgatggcgagcggcaagcagccgtcccacaaggacttc
taccccctcaccttcttcacggcccgcggcgaggacgtccaggagaagaacagcacggcc
tactacaacaacgccgaggtgtttgagatcgtggagcgcgtggaggagatgcgcaagaag
tggccggtggcgtggggcaagctggacgagggcagcatcggcgtggtgtcgccctacgcc
gaccaggtgttccgcatccgcgccgagctgcgcaagaagaggatgcacgaggtcagcgtg
gagagggtgctcaacgtgcaaggtaagcagttccgggtgctcttcctcagcacggtgcgc
acgcggcacacctgcaagcacaagcagacggccatcaagcgcaaggagcagctggtggag
gactccaccgaggacctggactacggcttcctgtccaactacaagctgctcaacacggcc
atcacccgcgcccagtccctggtggccgtggtgggagaccccatagccctctgctctgtg
ggcaggtgcaggaagttctgggagcacttcatctcgatctgccacgagaactccagcctg
cacggcatcaccttcgagcagatcaaggcccagctggaagccctggagctgaagaagacc
tacgtgctcaaccccctggcccccgagttcatcccccgtgccctgcgggccccccagcac
ccgcacccccacgcccacccgcagcacccccacccccaggcctccgtgggcaagcagggg
ccccagcagcagcagtctccccccaaggggaaaggacaacatgcgaaccacacagagctc
tttccaccggaagggtttgtccaacccaacccagcggtgctgatgggcaaccccatccgg
gcgttctccccgccccaggggggcgcgccggcgggcatgggcaagtctcccagccccgtg
cagcggatcgacccccacacgggcgccagcatcctctacgtccctgcggtctatggcggc
aacatggtcatgtccatgcctctgcctgtgagtgagcgtgtcgccatggtgccgcacccc
cactatgacattgcaggctcgacacatttaccctggcccggctaccagaaccgcttcccc
atggacccacgcatcatgagccaccaggcagccatggcctacaacctgaacctgctagcc
cagaaccgcggctcgccgatcccctacggcagcgggggcgtggcccacccctccccgctg
ggcatgggccagcagaccagccccgacaaggagctgcaggccgaccccatcaggaacggt
aagatggagggctgtccgaagtcggagcagagccgccttcagacaccagagaggaaatct
tcagacatgaaggacaaaggggagttggaccccggaggaccaggtcgaggcctggacccc
cagacagatggaatgggcttccccaatgctgctttgctccaccgcaaggacccctcaggc
caaagacccctcaactaccacctggcaccccccaatccagcattcgcccctgggccccac
ccagggggcagagccttccagtaccctgtatccaggctcccgttccgggtcccccctcag
catcccggctcctccatgacccaacagaaccaacaacagcattcggcccagctgtcgccc
gcctaccccagtagcagtcacaatccttccttcttcagcggacccatgcccccccacaga
ggagtgcagtctccaggcttagaaggcgaccccggggtctcggaggagatgggcaactcg
ataaggggtcccattggacaccagggaggtcaccacccagccctgtcccagcccggcagg
gtcaatagcttcggggaggagagccaggatggaggaatgggagatggacttgaccctcta
gctcttgaggccctgacccagcaggccagactgggccagtggggcgacccagggccgttc
ctccagggcggggtggccttcccccttccccagcagctggcccacctggcccagcccggc
ctggcccgcttccccccacagctgctccgggccaactggagaatgagcgccagcatggag
gaggaggctggcgccgccggcccgcccttcagcaggtacccaggcctcctgagagagatg
cccccccaggagcagatggaccccagggacccgactgagatgcagccccctccccagtcc
cgcctgctccagtaccgccaggtccaatcccagtcccgttccccaggggacccttcttct
ccatctgcctctacagccaatcacacgagctccttccctccgtgtccctaccccctcgac
cccagccgcgagctggacctcctcggcaacccggctctgcagccgcacccagggaacccc
ctctacaaccccaacgcatacccacactcggcccaccaaccgcagggccactccaccacc
cctcctccggcgcaggtcaaatacctcctccaggaggcccagtggccccacggcggagct
gcgggaggagcccagaaccacatgctggggcagggccaaaaccaaagcttcccctacggg
cttccggtcatggctcaccccagcaggcaggagcaggtccaccttatgcagcttcaccaa
caacaacaacaacagcaacaacagcagcagcagcaacagcaaggtcaaggtccaggccag
gaatcctatcatccactctcacccagaacagcagcagcaactgcccttcacaatgtagaa
gagtatgaacccaggggtcccggccggcctctctaccagaggcgcatctcctcaagctac
ccagacgagaccgccagcgcccaggcacccccgccctgtccagccgacctccaggagcac
ccccaccagcacggccacccccacgccccctacggataccccccgcctgaactgtggcct
ggcggaggcccccccggcccgtttcacaacattccatgcaacggagccagcacacttcag
caccgggacctcatagcagcgtcatccaaggccttgcggcaggcagaggagcagatgaag
gcagaggcggcggcagcagcagcccctcagccacccccccactccctccagcaccttgga
cagttcccccccctcatgcccaacagcaagcagcagcagcccccctcagagccaggtcag
agtcctggaggctcccaaagcctcagcaaacctcctaccatgtcctacgccagcgccctg
cgtgccccacccaagccccgagcgcgccccgaacaggtcaagaagaacagcgacccactt
tccttacttcaagagctcagtataggaagttcaaacggtagcaacggatattattcctat
tttaaatga
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