Osmerus eperlanus (European smelt): 134008819
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Entry
134008819 CDS
T10927
Symbol
rhot1b
Name
(RefSeq) mitochondrial Rho GTPase 1b isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134008819 (rhot1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
oep03029
]
134008819 (rhot1b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
oep04031
]
134008819 (rhot1b)
Mitochondrial biogenesis [BR:
oep03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
134008819 (rhot1b)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
134008819 (rhot1b)
GTP-binding proteins [BR:
oep04031
]
Small (monomeric) G-proteins
Rho Family
Miro
134008819 (rhot1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
EF-hand_7
EF-hand_1
Arf
RsgA_GTPase
MMR_HSR1
AAA_22
AAA
Pox_A32
FeoB_N
EF-hand_8
AAA_5
AAA_25
Motif
Other DBs
NCBI-GeneID:
134008819
NCBI-ProteinID:
XP_062304343
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All DBs
Position
22:complement(9268082..9281700)
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AA seq
660 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPDVVPYRAEEITIPADVTPERVPTHIVDYSE
AEQTDEQLFQEISKANVICIVYSVNNKSSIEKVTSHWIPLILDNTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNEYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
MKPPCVKALTRIFKVSDLDNDGSLNDNELNFFQRTCFNAPLAHQALEDVKNVVRKNVRDG
VCDNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLDLHQDYLFPPLKIPPDCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPDELKDLFDVFPYMPWGPDVNNTVSTSDQGWITYQ
GYLSQWTLTTYLDVQRCLEYLGYLGYSIVSEQESQAAGITVTRDKKIDLQKRQTQRSVFR
CNVFGGSGSGKTGFLQAFLGRNLLRQNTVKEEHRSYYAISTTYVYGQEKYLLLHEVFPDF
DFLSDAELTCDIVCLVYDSSNPHSFEYCAKVFKQYFMDSKTPCMMLAAKSDLQETRQLYG
CTPLEFCRKHKMPPPQSFTCNEAAAPSKDIYIKLTTMAMHPHARLRCMCTCNRCTFCLCQ
NFLNSELVQSVKAKLYTAVFSRHMTQADLKTSTFWLRASVGATVFAILGLAMYRALLKHR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaggacgtcaggatattactagtgggagagcccaaagtagggaagacttccctg
atcatgtctctggtcagcgaggagtttccagatgtggttccatatcgggctgaggagatc
accatacctgcagatgtcaccccagagagagttcccacacacatagtagactactcagag
gcagagcaaacagacgagcaactctttcaagagatatccaaggcaaatgtgatttgcatt
gtgtactcagtcaacaacaagagttcaattgagaaggttaccagccattggatcccgctc
attcttgacaacacagacaaggacagcagggttcctctgatcctggtggggaacaagtcg
gacctggttgaacacagcagcatggagaccatcctgcccatcatgaacgagtacacagag
atagagacctgcgtggagtgttcagccaagaacttgaagaacatctctgagcttttttac
tacgcccaaaaagccgtcttgcaccctactggccccttgtactgtcctgaggagaaagag
atgaagcctccctgtgtcaaagccctgacgcgcatctttaaagtgtcagacctggacaac
gatggcagcctaaatgataatgaactcaacttcttccagaggacatgcttcaacgctccg
ctggctcatcaggccctggaggacgtgaagaacgtggtgaggaagaacgtccgagacgga
gtgtgcgacaacggactcacgctgaaagggttcctgttcctgcacacgctcttcatccag
agggggagacacgagaccacctggaccgtgctcaggaggttcggctacgacgacgacctg
gatctccatcaggactacctgttccctccgttgaaaatccctccggactgcaccacggag
ctcaaccacaacgcctacctcttcctccagagtgtctttgacaagcatgacaaggaccgg
gactgcgcactgtcccctgatgagctgaaggacctgtttgacgtgtttccctacatgcct
tggggtcctgacgtcaacaacacggtgtccaccagcgaccagggctggatcacctaccag
ggctacctctcccagtggacgttgaccacgtacctggatgtccagaggtgcctcgagtac
ctgggttaccttggttactccatcgtctccgagcaagagtcccaggctgccggcatcaca
gtgacgagggacaagaagatcgacctgcagaagaggcagacccagcgaagcgtgttccgc
tgcaacgtgttcgggggcagcggcagtggcaagactggcttcctccaagccttcctgggg
agaaacctcctgcggcaaaacactgttaaggaggaacacagatcctactatgctattagc
acaacctatgtgtacggacaggagaaatacctgctgctccacgaggtcttcccagacttt
gacttcctgtcggacgccgagctaacctgtgacattgtgtgtctggtctacgactccagc
aacccacactcgtttgagtactgcgccaaagtcttcaagcaatacttcatggacagcaag
accccgtgcatgatgctagcagccaagtccgacctgcaggagaccaggcagctgtacggc
tgcacgccgctggagttctgccgcaagcacaagatgccccctccccagtccttcacctgc
aacgaggcggcagcgcccagcaaggacatctacatcaaactcaccaccatggccatgcac
cctcacgcgcgcctgcgctgcatgtgcacgtgtaacaggtgcaccttctgcctgtgccag
aacttcctcaactcggagctggtgcagtcggtgaaggccaagctctacacggccgtgttc
agcagacatatgacgcaggcagacctgaagacctccaccttctggctgagagcgagtgtg
ggcgccactgtgttcgccatcctaggcttggccatgtacagagccctgctcaaacaccgg
tga
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