KEGG   Osmerus eperlanus (European smelt): 134008825
Entry
134008825         CDS       T10927                                 
Symbol
ntn1a
Name
(RefSeq) netrin-1a isoform X1
  KO
K06843  netrin 1
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:oep00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    134008825 (ntn1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:oep00536]
    134008825 (ntn1a)
Glycosaminoglycan binding proteins [BR:oep00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   134008825 (ntn1a)
SSDB
Motif
Pfam: Laminin_N NTR EGF_laminin EGF_LMN_ATRN BNR_6
Other DBs
NCBI-GeneID: 134008825
NCBI-ProteinID: XP_062304356
LinkDB
Position
22:8900958..8953858
AA seq 603 aa
MLRVLDIVVTAVTVCLMFEGVYGGYGMSMFAAQTSPPDPCYEENGNPQRCIPDFVNSAFG
KEVRVSSTCGKTASRYCVVTEKGDERNRNCHTCDASDPKKYHPPAYLTDLNNPHNLTCWQ
SDNYIQYPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMVIFKSMDYGKSWVPFQFYSTQC
RKMYNKPSKATITKQNEQEAICTDSHTDMHPLSGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIKVTFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVKDRDGN
LVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSG
RKSGGVCLNCRHNTAGRHCHYCKEGYYRDLSKPISHRKACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVALPTTTASSTEEPSDCDSYCKASKG
KLKINMKKYCKKDYAVQVHILKADKAGEWWKFTVNIISVYKQGESRIRRGDQFLWVRAKD
VACKCPKVKPGKKYLLLGNDEDSPGQSGVVADKGSLVIQWRDTWARRLRKFQQREKKGKC
KKA
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgttaagggttttggatattgtggtcactgctgtgaccgtctgcctcatgtttgagggg
gtgtacggtggttacgggatgagcatgttcgctgcgcagacgtctccccctgatccttgc
tacgaagagaacggtaacccacaaagatgcatccccgattttgtaaactctgctttcggg
aaggaggtgcgggtgtccagcacctgtggcaaaactgccagcaggtactgtgtggtaacg
gagaaaggggacgagagaaataggaactgccacacctgcgacgcctcggaccccaaaaag
tatcacccaccggcatatttgacggaccttaacaacccccataaccttacatgctggcag
tcagataattacatccaatacccccagaatgttactttaactctgtcacttggcaaaaag
tttgaagtcacttacgtaagcctgcagttctgctcaccacggcccgagtcaatggtcatc
tttaaatctatggactacggcaagtcgtgggtccctttccagttttactcgacccagtgc
agaaagatgtacaacaaaccaagcaaagctacaatcacaaagcagaacgaacaagaggcc
atatgtactgactctcacaccgacatgcaccctctgtcaggcgggctcatcgcgttcagt
acattggatggcagaccctcggcgcatgacttcgataactcgccggtgcttcaggactgg
gtcacggctactgacatcaaggtgactttcagccggttgcacactttcggcgatgagaac
gaagatgactcggaactggcccgggactcttatttctatgcagtgtcagacctgcaggtc
ggcggtcgatgcaaatgcaatgggcacgcttcgcggtgcgtaaaagacagggacggaaac
cttgtttgtgagtgcaaacataacactgcgggaccagagtgtgacaggtgcaaacccttc
cactatgatcgaccgtggcaacgcgcaacagccagggaagcgaacgaatgcgttgcctgt
aactgcaacctgcacgcccgccgctgtcgcttcaacatggagctgtacaagctgtcaggg
aggaagagcggaggggtctgcctcaactgtcgccacaacacggcggggcgccactgccac
tactgcaaggagggctactaccgggacctgtccaagcccatctcccacaggaaggcctgc
aaagcatgtgattgccatcccgtgggcgctgctggcaaaacctgtaaccaaaccacgggc
caatgtccctgtaaagacggcgtgactggtatcacgtgcaaccgctgcgctaaaggctac
cagcagagccgctcgcccattgccccctgcataaagatccctgttgcccttccgaccacc
actgccagcagcacagaggaaccatcagactgtgactcctactgcaaggcgtccaaaggc
aagctgaagatcaatatgaagaagtactgcaagaaagattatgcggtccaggtgcacatt
ctgaaggcggacaaggcgggcgagtggtggaagttcaccgtcaacatcatctccgtctac
aagcagggcgagagccgcatccgccgcggcgaccagttcctgtgggtgagggccaaggac
gtggcctgcaagtgccccaaggtcaagcccggaaagaagtacctgctcctgggcaacgac
gaggactccccgggccagagcggcgtggtggccgacaagggcagcctggtcatccagtgg
agggacacgtgggcccgtcggctgaggaagttccagcagcgcgagaagaaaggcaagtgc
aagaaggcatag

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