Osmerus eperlanus (European smelt): 134008825
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Entry
134008825 CDS
T10927
Symbol
ntn1a
Name
(RefSeq) netrin-1a isoform X1
KO
K06843
netrin 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134008825 (ntn1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oep00536
]
134008825 (ntn1a)
Glycosaminoglycan binding proteins [BR:
oep00536
]
Heparan sulfate / Heparin
Axon guidance molecules
134008825 (ntn1a)
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Paralog
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
134008825
NCBI-ProteinID:
XP_062304356
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All DBs
Position
22:8900958..8953858
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AA seq
603 aa
AA seq
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MLRVLDIVVTAVTVCLMFEGVYGGYGMSMFAAQTSPPDPCYEENGNPQRCIPDFVNSAFG
KEVRVSSTCGKTASRYCVVTEKGDERNRNCHTCDASDPKKYHPPAYLTDLNNPHNLTCWQ
SDNYIQYPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMVIFKSMDYGKSWVPFQFYSTQC
RKMYNKPSKATITKQNEQEAICTDSHTDMHPLSGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIKVTFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVKDRDGN
LVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSG
RKSGGVCLNCRHNTAGRHCHYCKEGYYRDLSKPISHRKACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVALPTTTASSTEEPSDCDSYCKASKG
KLKINMKKYCKKDYAVQVHILKADKAGEWWKFTVNIISVYKQGESRIRRGDQFLWVRAKD
VACKCPKVKPGKKYLLLGNDEDSPGQSGVVADKGSLVIQWRDTWARRLRKFQQREKKGKC
KKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggttttggatattgtggtcactgctgtgaccgtctgcctcatgtttgagggg
gtgtacggtggttacgggatgagcatgttcgctgcgcagacgtctccccctgatccttgc
tacgaagagaacggtaacccacaaagatgcatccccgattttgtaaactctgctttcggg
aaggaggtgcgggtgtccagcacctgtggcaaaactgccagcaggtactgtgtggtaacg
gagaaaggggacgagagaaataggaactgccacacctgcgacgcctcggaccccaaaaag
tatcacccaccggcatatttgacggaccttaacaacccccataaccttacatgctggcag
tcagataattacatccaatacccccagaatgttactttaactctgtcacttggcaaaaag
tttgaagtcacttacgtaagcctgcagttctgctcaccacggcccgagtcaatggtcatc
tttaaatctatggactacggcaagtcgtgggtccctttccagttttactcgacccagtgc
agaaagatgtacaacaaaccaagcaaagctacaatcacaaagcagaacgaacaagaggcc
atatgtactgactctcacaccgacatgcaccctctgtcaggcgggctcatcgcgttcagt
acattggatggcagaccctcggcgcatgacttcgataactcgccggtgcttcaggactgg
gtcacggctactgacatcaaggtgactttcagccggttgcacactttcggcgatgagaac
gaagatgactcggaactggcccgggactcttatttctatgcagtgtcagacctgcaggtc
ggcggtcgatgcaaatgcaatgggcacgcttcgcggtgcgtaaaagacagggacggaaac
cttgtttgtgagtgcaaacataacactgcgggaccagagtgtgacaggtgcaaacccttc
cactatgatcgaccgtggcaacgcgcaacagccagggaagcgaacgaatgcgttgcctgt
aactgcaacctgcacgcccgccgctgtcgcttcaacatggagctgtacaagctgtcaggg
aggaagagcggaggggtctgcctcaactgtcgccacaacacggcggggcgccactgccac
tactgcaaggagggctactaccgggacctgtccaagcccatctcccacaggaaggcctgc
aaagcatgtgattgccatcccgtgggcgctgctggcaaaacctgtaaccaaaccacgggc
caatgtccctgtaaagacggcgtgactggtatcacgtgcaaccgctgcgctaaaggctac
cagcagagccgctcgcccattgccccctgcataaagatccctgttgcccttccgaccacc
actgccagcagcacagaggaaccatcagactgtgactcctactgcaaggcgtccaaaggc
aagctgaagatcaatatgaagaagtactgcaagaaagattatgcggtccaggtgcacatt
ctgaaggcggacaaggcgggcgagtggtggaagttcaccgtcaacatcatctccgtctac
aagcagggcgagagccgcatccgccgcggcgaccagttcctgtgggtgagggccaaggac
gtggcctgcaagtgccccaaggtcaagcccggaaagaagtacctgctcctgggcaacgac
gaggactccccgggccagagcggcgtggtggccgacaagggcagcctggtcatccagtgg
agggacacgtgggcccgtcggctgaggaagttccagcagcgcgagaagaaaggcaagtgc
aagaaggcatag
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