Osmerus eperlanus (European smelt): 134009189
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Entry
134009189 CDS
T10927
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134009189
Membrane trafficking [BR:
oep04131
]
Endocytosis
Others
Others
134009189
Endosome - Lysosome transport
134009189
Endosome - Golgi transport
134009189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
134009189
NCBI-ProteinID:
XP_062304898
LinkDB
All DBs
Position
22:11123715..11195669
Genome browser
AA seq
1018 aa
AA seq
DB search
MMMFCFQVILILTKLYDFHLGSVTESTLWRSTDYGSTYEKMNDKVGTKTVLSYLYVCPTN
KRKIMVLTDPEFESSLLISSDEGASYQKYRLSFYILSLLFHPTREDWALAYSHDQKLYSS
LDFGRKWLLVQERVTPSRFYWSVTGLDKEADLVHMEAHTPDGRVQYVTCRAQMCSEPNRN
YPFLGYIDISSLVVQDDYMFIQVTTNGRASYYVSYQREPFIRIKLPKYSLPKDLHIVSTD
ENQVFAAVQEWNQNDTYNLYLSDTRGILFTLAMENVKTTRGLAGNQMLDLYEVAGIKGML
LANKRQENQVKTYITYNKGRDWRLLQAPAADLAGNDIHCVLPFCSLHLQLHTSENPYLSG
AISTKTSAPGIIVATGNIGTELSYNNVGMFISSDAGNNWRQIFEEEHNVWFLDKGGALVA
VKQPSVPTRHLWISFDEGRQWARHSFSLVPLFVDGVLVEAGTENQIMTFFGHFSHRSEWQ
LIKIDYKSIFNRLCSEEDYQTWHLHNQGEPCVMGQKQIYMKRRPGNYCMLGKDYAKILSA
ESCICRAHDFECDYGYERRGDGNCRPAFWFNPASVSRSCSQGQNYYNSTGYRKVVSNNCT
KGVKDMYTARKQQCPNRAPKGLALTTREGVLTTSLGANVTFLVHLDEGDSMRTNIQLDFG
DGTAVSYSNLSWTEDGIRHVYKTAGIFRVTALAENTLGYDSTTLFLHVTCPVENVQLLAP
FVVIKNKEVNLTAVVWPSHSRTITFFWWLGNNTEPVITLEGSISYTFTSEGMNTVTVQVS
SASSILQDSKTIAVQEFFKSLLLSFSPNLDEYNPDIGEWRQDVGRVIKKALLQVSEFPEE
QLLVAVFPGVPTAAELFLLPQKNQSESRKKSEEELEKISEILVSALNQNLVEFELKPGAR
VIVYITQLTLAPLVDSSPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNQE
KEQEMIGSVGQNDSTPKITLSEFSTAKELMEKDLDARVKRGVGNAYESTREIPNCTSV
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgttttgttttcaggttatcctcatcctgaccaagctgtatgacttccacctg
ggcagcgtcaccgagagcactctgtggaggtccactgactacgggtccacctatgagaag
atgaatgacaaagtggggaccaagaccgtcctcagttacctgtacgtctgtcccaccaac
aagcgcaagataatggtgctgaccgacccagagtttgagagcagcctgctcatcagctca
gacgagggggccagctaccagaagtaccgcctcagcttctacatcctcagccttctcttc
caccccacccgggaggactgggccctcgcctacagccacgaccagaagctctacagttct
ctagactttggtaggaagtggctgctggttcaggagcgtgtgactcctagcaggttctac
tggtctgtgactggtctagacaaagaagctgacctggtccacatggaggctcacaccccc
gatggacgtgtgcagtatgtaacatgccgggcccagatgtgctccgagcccaacaggaac
taccccttcctggggtacatcgacatcagctccctggtggtccaggacgactacatgttc
atccaggtgaccacgaatgggagggccagctactacgtgtcctaccagagagagccgttc
attcgcatcaaactgcccaaatactctctcccgaaggacctgcacatcgtcagcaccgac
gagaaccaggtgtttgccgccgtgcaggagtggaaccagaacgacacgtacaacctgtac
ctgtctgacacgcgcgggattctcttcacgctggccatggagaacgtcaagaccacgcgg
ggcctggcaggaaaccagatgctcgacctgtacgaggttgcaggtatcaaggggatgctc
ctcgccaacaagcgccaggagaaccaggtgaagacctacatcacgtacaacaagggccgc
gactggaggctcctccaggcccccgccgccgacctcgccggcaacgacatccactgcgtc
ctgcccttctgctcgcttcacctgcaactccacacgtctgagaacccttacttgtcaggg
gccatctccaccaagacgtcggctccaggcatcatcgtggccacaggtaacatagggaca
gagctttcctacaacaacgttgggatgttcatctcctccgacgccgggaacaactggaga
cagatctttgaggaggagcacaacgtgtggttcctggacaagggcggggcgctggtcgcc
gtgaaacaaccctcggttccgacgaggcacctctggatcagttttgatgaggggaggcag
tgggccaggcacagcttctctctggtgcctctgtttgtggacggagtcctagtggaagca
ggcactgagaaccagatcatgacgtttttcggacacttcagccaccgctcggaatggcag
ctcatcaagatcgactacaagtccatcttcaacaggctgtgttctgaagaggactaccag
acctggcacctccacaaccagggcgagccttgtgtgatggggcagaaacagatctacatg
aaacgaaggcctggcaactattgcatgctgggaaaggactacgccaaaatcctctctgca
gagtcttgtatatgccgggcccatgactttgaatgcgattacggttacgagcggagggga
gacgggaactgcaggccggcattctggttcaatcccgcgtccgtgtccaggagctgcagc
caggggcagaactactacaacagcacagggtatcgaaaggtggtctccaacaactgcacc
aaaggggtgaaggacatgtacacggccaggaagcagcagtgccccaaccgggcccccaaa
ggcctggctctgaccacccgagagggcgtcctcaccaccagcctgggtgccaacgtcacc
ttcctggtgcatctggacgagggggactcgatgaggacgaacatccagctggactttggg
gacggcacggctgtgtcctactccaacctgagctggaccgaggatgggatccgacacgtg
tacaagacggcggggatattccgtgtcaccgccctggcggagaacacgctgggctacgac
agcaccaccctcttcctgcacgtcacctgccccgtggagaatgtccagctgctggctccc
tttgtggtcatcaagaacaaggaggtgaacctgaccgctgtggtgtggccaagccactct
cgaaccatcaccttcttctggtggctgggcaacaacaccgagcctgtgataacgcttgag
ggaagcatctcgtacaccttcaccagcgaggggatgaacacggtcacagtccaggtgtcg
tctgccagctccatactgcaggacagcaagaccatcgcagtccaagagttcttcaaatcg
ctgcttttatctttctcccctaatctggacgagtacaaccctgacatcggcgagtggaga
caggatgtggggagagtaattaaaaaggctctgctccaagtgtcagagttcccggaggag
cagctgctggtggcagtgttccccggggttcccacagcggccgagctcttcctgttgcca
cagaagaaccaatcagagagcaggaaaaagagcgaggaggagctggagaagatatctgaa
attcttgtcagtgctctcaatcaaaacctggtggagtttgagctgaagccaggagcgaga
gttatagtttacatcacacagttaacattggcacccttggtggattccagccccagacac
agcagctctgccatgctgatgctgctgtctgtggtcttcctggggcttgctgtctttctg
atctacaagttcaagagaaaaatcccctggattaacatttatgcggaggtgaaccaggag
aaggagcaggagatgattggctcagtcggtcagaacgacagcacgcctaaaatcaccctg
agcgagttctcgacggccaaggaactcatggagaaagatctagacgcaagggtcaaacgg
ggagttgggaacgcctacgagagcacaagagagattccaaactgtaccagtgtgtaa
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