Osmerus eperlanus (European smelt): 134009208
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Entry
134009208 CDS
T10927
Symbol
samd1b
Name
(RefSeq) LOW QUALITY PROTEIN: sterile alpha motif domain-containing protein 1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134009208 (samd1b)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
134009208 (samd1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
DUF4777
Motif
Other DBs
NCBI-GeneID:
134009208
NCBI-ProteinID:
XP_062304917
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Position
22:complement(12128101..12133168)
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AA seq
569 aa
AA seq
DB search
MSEPKYRDWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTRAELEKLIQEQTVLKV
SYKGSISYRNAAKVQRKSRKKNEFTPGGGAETTRERGKHAMSNNGDSAHSFSDPEEDDSV
DKEDSEPSPSPDPRTQTTVMMPEDEQKTAPSTSGNGCLGCGATGCAAGSGCEEKASATRD
KRLGQTGSGIPSHGHEINTPVVHDASSKTKAARGGVEPGSCGGKPTSSSSGADGEKQSCP
ESAGSNSILIRQQQPAAHKTKLQAGGGGEGGQDNSDLGDRLVASVRSLAERNRGTATTRG
HKPLGLKEILGYLSGQERLSEEKLTRSKVKVVLEKEVSRGRLHRTRCGNITLPSRGAEKE
TVAKAPAARLLKSALQEKHVVKKATPRGQGMRMTPPVAMETEPGRPDDITEGSEALTPVP
NLAMKPEATVQPCSKGESEAGSPSRAVCPSAQRGVAPGCEGVRVEESAVTPDQIQSDGQS
EGGSHTSSDLNSCKMEVGVSSCLLTPTASPSDSALPEERRMNGDVSVKAEGVRGSLVLWT
VSDVVRYFTEAGFPEQALAFRTQEIDGKS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacccaagtaccgagactggatcctggagaccatcgattctctgcgctcgaga
aaagcacgaccggacctcgagaggatttgtcgaatggttcggagaagacacgggtcggac
ccggaccggaccagagcagaactagaaaaactgatccaggagcagaccgttctcaaagtt
agctacaaaggatccatttcctaccggaacgcggcgaaagtccagaggaagagtagaaag
aagaacgagtttacgcccggtggcggcgcggagacaacgagggagcgaggcaaacatgcc
atgagcaacaacggagacagcgcgcacagtttctccgacccggaggaggatgatagcgtg
gacaaggaggactctgaaccgagcccgtcccctgacccccggacccaaaccacggtgatg
atgcccgaggacgaacaaaagacagccccttcgactagcggaaacggctgtctcggttgt
ggcgcaacgggctgcgctgccgggagcggctgtgaggaaaaagcaagtgcgacgagagac
aagagattaggacagacaggcagcggcatcccgtcgcacggacacgaaataaacactccc
gtcgttcacgacgcctcgagcaaaaccaaggcggcccggggaggagtagagccaggctcc
tgcgggggtaaaccgaccagcagcagcagcggagccgacggagaaaagcaaagttgcccc
gaaagcgccggttccaacagcattctcatccgacagcaacaaccggctgcgcacaagact
aaactccaggcgggcggggggggcgaaggggggcaggacaactcggatctgggcgacaga
ctcgtggcctcagtccgtagcctggccgagaggaaccggggcacagcaacgaccagggga
cacaagccgctcggcctgaaggagattctgggatacctgagcggacaggagcggctctcg
gaggagaagctgacccgcagcaaagtcaaagtggttctggagaaggaggtgtcgaggggc
cggctccacaggactcgctgcgggaacatcactctcccgtcaaggggggcggaaaaggaa
actgtagctaaggcgcccgccgccagacttctgaagagcgcactgcaggagaaacacgtc
gtgaaaaaggcaacccccagaggtcaggggatgaggatgaccccccccgtcgccatggag
acggaacctggtcgccccgacgacatcacagaaggcagcgaggcgttgactcccgtgcct
aacctcgccatgaaaccggaagcaactgtgcagccctgcagcaaaggggagtcagaggcg
ggatctccatcccgggctgtgtgtccctctgcccagcggggcgtggccccagggtgtgag
ggcgtacgagtggaggagagcgctgtcactccagaccagatccaatcagatggacagtcc
gagggagggagtcatacttcctctgatcttaacagttgtaagatggaggtgggcgtgtcc
tcttgcctgctcacacccacagcctcccccagtgactccgccctgccagaggagcgcagg
atgaacggagatgtcagtgtgaaggcggagggggttcgagggagcctggtgctctggaca
gtgtcagacgtggtgaggtacttcacagaggcaggcttcccagagcaggccttggctttc
cggacacaggaaatagatgggaagtcc
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