Osmerus eperlanus (European smelt): 134009512
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Entry
134009512 CDS
T10927
Name
(RefSeq) multiple PDZ domain protein isoform X1
KO
K06095
multiple PDZ domain protein
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134009512
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
DUF6288
L27_1
Motif
Other DBs
NCBI-GeneID:
134009512
NCBI-ProteinID:
XP_062304986
LinkDB
All DBs
Position
23:complement(6636859..6679205)
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AA seq
2114 aa
AA seq
DB search
MIESMDTQRALQAVERLQAKLRERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQHLKD
QGGVPSSLGNELSEPYTIKPNGGHLAYPEVSTVLQINGKPSPEEFEHIIRSMAQGRYVTH
MELLKPVSGGLGFSVVGLRSENRGELGIFVQEIQPGSVAHCDGKLKEADQILAINGQPLD
LTVTHQQAIGILQRASASVQLTVARGPIPQLASPVVSRTPSAASTLSAHSSAAFWQHVET
IELVNDGTGLGFGIVGGKTTGVIVKTILPGGIADQDGRLRSGDHILKIGDTELLGMGSEQ
VAQVLRLCGNRVKLVITRGPSDDPAAPVALPTLAEQQGYEEEEDDAFDVELTKNAQGLGI
TIAGYVGDKNSEPSGIFVKSITKDSAVEQDGRIHVGDQIIAVDGMNIQGFTNQQAVEVLR
HTGQTVLLKLVRRGFRPEEIPPAMAPSAMVLPSAVALPSAMAPSALVLPPAMAPSTLVLP
PAPEARDLTLERVNAEIAQEEKQFQASSGGSHAVLPKDQLIEDRDGVKLTAEEEEELMNK
WQNILGPSNEVVVAQVEKFSESSGLGVSLEASAGHHYIRSVLPEGPVGRCGKLFSGDELL
EVNGISLIGETHKEVISILKELPVRVYMACCRPAPLLQSDIDSGQSGLEALPTEPSIEMQ
GDPVGFLVPGDSEGLEAAEAGDRHVTTEEPLGSPLAMWETEIQDIELEKGEDGLGFSILD
YQDPTDPAKTVIVIRSLVPVGVAEIDGRLLPGDRLMFVNSTNLENASLEDAVQALKGADI
GKVRIGVAKPLPSYDEEDSPSSSSAMRALIFATLLVKEREESADSFLFRAEPALIDSNDV
DLSEDRVFEHRFSGEEDDTYQASMIALHGSTCSSDPDYQITLHSSTPKRTTRLGLSDERP
SFATVSEVGDDTEAFSLEEKPIAFPSPPSCTGGHAGAAPLAESDLCPGILSGRLAPADLS
ISCSPDSRPSSNLIPEATASLHFQMETTISIGDIGEIRVLMKGEGPCAKESTEDADKEEP
TSGSNFERTITVVKGNSSLGMTVSALKDGMGMLIRSIIHGGSISRDGRLGVGDLILAING
EPTAHMTNAQARAMLRRHSLIGPDLGSTCAPEDDLCPFYVITYVPAEYLEEYKASLEQPK
EDVFLDPSRASRRAASELPEREDGEGEESELQSSYTNWNQPRKVELLREVGKSLGISIVG
GRGMGSRLSNGEVMRGIFIKHILEDSPAGQNGTLKTGDRILEVDGVDLRDASHEQAVEAI
RRAANPVVFLVQSIIHRARSSATNTNEERAAAAAKANSEKEVESHSRLFLRLSPTNPFTP
TPFKIPNREHGKVSPPTPVLSLPVVPHVGETDTDTLTEIPDRVPREEEEEEEDEFGYSWQ
KIHQRYGGLPGSLQVMELEKGRAGLGLSLAGNRDRARMSVFVVGIDPGGAAGRDGRMMVG
DELLEINGQILYGRSHQNASSIIKSVPSKVKIIFIRNTDALEQMAVGPMREYGDMQEPHA
ELETCASNPPAALDPDAFRNVQHVVLSEVEGELGITFCVEDSSRGLVIQSISQSGPVGKD
GSLKAGDKLLAVDDKPILGYSTDMVHYLLRKSQGRVKLTVCEDDLSLPLPPSISGSHASD
IPAAGLPIMPSIAMVPATEQPEEEPIGSSSRPSTPDTLDSDPVTCPIIPGCETTIDISKG
RTGLGLSIVGGCDTLLGAIIIHEVYEEGAASKDGRLWAGDQILEVNGIDLRVATHDEAIN
VLRQTPPRVRLSVYRDEAQYREEDMWDSFSLELLKKPGQGLGLSIVGRRSDTGVFVSDIV
KGGAVDRDGRLMQGDQFLAVNGKDVRSATQEAVAALLKCCAGPIKLDVGRFKAGPFHSER
RMSQSSQMSEGSYKASHASLSGSGNLHGDLDNRSRSQDSLDRQDVRAVEFTKGPTDSLGI
SIAGGMGSPLGDVPIFIAMMNPTGLAAQTQKLKIGDRIVSICGTPAEGISHTQAVTLLKN
ATGTIELQVVAGGDTSVTGPPQEHAAAGLSVPGLTPSTIFQDDLGPPQYKSITLERGPDG
LGFSIVGGFGSPHGDLPIYVKTVFGKGAASEDGRLKRGDQIMAVNGQSLDGVTHEEAVGI
LKRTKGSVTLTVLS
NT seq
6345 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtcaatggatacccagcgtgccttgcaggcggtggagcggctccaggcgaag
ctaagggagcgtggggaggtacccaccgaggagaaactcagcctgctcaagtctgttctc
cagagcccgctgttccaccagatcctggccctgcagaagtctgtccagcacctcaaggac
cagggaggtgtcccatcctctcttggaaatgagctgagcgagccctacacaatcaaaccc
aacggtggccatcttgcttacccagaagtctccactgtcctgcagatcaatggaaaacct
tcccccgaggagtttgagcacatcattcgctccatggctcagggccgctacgtgacccac
atggagctgttgaagccggtgtcaggggggctgggtttcagtgtggtgggcctgaggagt
gagaaccggggagagctggggatctttgtccaggagatccagcctggcagcgtggctcac
tgcgacgggaagctgaaggaggcggaccagatcttggccatcaacggccagcccctagac
ctgacggtgacccaccagcaggctataggcatcctgcagcgggcctcggccagcgtccag
ctgaccgtggccaggggccccatcccccagctggccagccccgtggtgtccaggaccccc
tcggccgccagcaccctgtcggctcactctagcgccgccttctggcaacacgtggagacc
atcgaactggtcaacgacggcacaggcctggggttcggcatcgtgggaggaaagaccacc
ggggtcatcgtcaaaaccatcctgcccggaggaatcgctgaccaggacggccgcctgcgc
agcggggaccacatcctgaagatcggggacacggagctgctggggatgggcagcgagcag
gtggcccaggtcctgcggctgtgtggcaaccgggtgaagctggtcatcaccagggggccc
tccgacgacccggcggcgcccgtggcgctgcccacgctcgccgagcaacagggctatgag
gaagaggaggacgatgcttttgatgtggagctgaccaagaacgcccagggcttggggatt
accatcgccggctatgtgggggataagaactctgagccgtctggtatctttgtgaagagc
ataactaaagacagtgccgtagagcaggatggaaggattcacgttggagaccagatcata
gctgtggacgggatgaacatccagggcttcaccaaccagcaggccgtggaggtgctgcgt
cacacgggccagactgtgctcctgaagctggtgaggcggggcttccggccggaggagatc
cccccagccatggcccccagcgccatggtcctcccatccgccgtggccctcccatccgcc
atggcccccagcgccctggtcctacccccagccatggcccccagcaccctggtccttccc
cccgcccccgaggccagggacctcactctggagagggtgaacgcggagatcgctcaagag
gagaagcagttccaggcgagcagtggaggatctcatgctgtcctgcccaaggatcagctg
atagaagacagagacggagtcaagctcacagcggaggaagaggaggagctgatgaacaaa
tggcagaacattctgggccccagcaatgaagtagttgtggcccaggtggagaagttcagt
gagagcagtgggctgggcgtgagcctggaggccagcgctggacaccactacatccgctcc
gtgctgcccgagggccccgtaggccgctgtgggaagctcttcagcggggacgaactgctc
gaggtcaacgggatctctctgattggcgagacccacaaggaagtgatcagcattctgaag
gagcttcctgttcgtgtttacatggcctgctgcaggccagcccctctcttgcagagtgac
attgactctggacaatcgggactggaggccctgcccacggaacctagcatagagatgcaa
ggagaccccgtcggctttctggttcccggagattccgaggggttggaggcggcggaggca
ggggacagacatgtgacgacggaggagccgctgggatctcctctggccatgtgggagacg
gagatacaggacattgagctggagaagggcgaggacggactgggattcagcatcctggac
taccaggacccgacggatccggctaagacggtgatcgtgattcgctcgttggtgccagtg
ggggtggcggagattgacggcaggctgttgccgggagaccggctcatgttcgtcaacagc
accaacctggagaacgcaagtctggaggacgccgtccaggcactgaaaggggccgacatc
ggcaaggtccgaataggagtggccaagccgttgccatcctacgatgaagaggacagtcca
tcgtcatcctcggccatgcgtgctcttatctttgccactttgctagtgaaagagagggag
gagtcagctgacagcttcctcttccgagcagagccggcattgattgactccaacgatgtg
gacttgtccgaagacagagtgtttgagcatcgcttctcgggagaggaagacgacacatac
caggcgtccatgattgccctccatggaagcacctgcagctctgacccagactaccagatc
accctgcactcctccacgcccaagcgaacgactcgtctgggtttgtcggacgagcgtcct
tccttcgcgaccgtgtccgaggtcggcgacgacaccgaggccttctccctcgaggagaag
ccgatcgcctttccttcgccgcccagctgcacgggaggtcacgccggtgccgcgccgctc
gccgaatcagatctctgcccggggattctttcaggacgactggcacccgcggatttgtca
atctcgtgcagtccagattccaggcccagttctaatcttataccggaggcaacggcgtct
ctccattttcagatggagaccaccatttctatcggggacattggagagatacgcgtttta
atgaagggagaagggccttgtgctaaagagtctacggaggatgctgacaaggaagagcca
acctctgggagcaattttgaaaggactatcactgttgtcaagggcaactccagtcttggg
atgacggtaagtgccttgaaggacggtatggggatgctcatccgaagcatcatccacggg
ggctccatcagccgcgatggccgcctgggggtgggagacctcatcctggccatcaacggg
gagcccactgctcacatgaccaatgcccaggctcgcgccatgctgcgaagacactccctc
atcgggccagacctgggatcgacctgtgcacccgaggacgatctgtgcccgttttatgtc
attacctacgttcctgctgagtatctggaggagtacaaagcgagcctggagcaacctaaa
gaggatgtgtttttggacccatcccgggcctcaaggagagctgcctctgagctcccagag
agagaggatggagagggagaggagagtgagctccagagctcctacaccaactggaaccag
cccaggaaagtggagctcctgcgagaggtgggtaagtctctgggcatcagcatcgtgggc
ggccggggaatgggcagccgtctgagcaacggagaggtgatgaggggcatcttcatcaag
cacatcctggaggacagccccgccgggcagaacggaaccctgaagaccggcgaccggatc
ttggaggtggacggggtggacctgagggacgccagccatgagcaggcagtggaggccatc
cgcagggcagccaaccccgtggtgttcctggtccagagcatcatccaccgggccagatca
tcagcaacgaacaccaatgaggagagagctgccgcagcggccaaagccaatagcgaaaag
gaggttgagagtcacagtagacttttcctccgtctctccccaactaatcccttcacccct
actccgtttaagatccccaacagagagcatgggaaggtgtccccccccacccctgtcctc
tccctccctgtggttcctcacgtgggagagacggacaccgacacgctgacagagatccca
gacagagtcccccgggaggaggaggaagaggaggaggacgagtttggctacagctggcag
aagatccaccagcgctacggaggcctcccaggctccctccaggtgatggagctggagaag
ggcagggccggcctggggctcagcctggcgggcaaccgcgaccgcgcccgcatgagcgtg
ttcgtggtggggatcgacccgggcggggccgcggggagggacgggcgcatgatggtcggt
gacgagctgctggagatcaacggacagatcctgtacgggcggagccaccaaaacgcctcg
tccatcattaaaagcgttccgtcgaaggtcaaaatcatctttatcaggaacacggatgct
ctggagcagatggccgtgggacccatgagggagtatggagacatgcaggagccccacgca
gagctggaaacatgtgcttccaatccccccgccgcacttgacccggacgcgttcagaaac
gttcagcacgtcgtcctgtccgaggtggagggtgaacttggcatcaccttctgtgtggaa
gattctagcagaggactggtgattcagagcatctctcaaagtggaccagtcgggaaggat
ggcagcttaaaggcaggggataaactccttgcggtggacgacaaacctatactgggctac
tccacagacatggtccactacctgttgaggaagagccaaggccgggtgaagctgacagtc
tgcgaggacgacttgtcgctccccctccctccctcgatctccggcagccacgcctcagac
atacccgccgccggcctacccatcatgcctagcatcgccatggtcccagcgacggagcag
cctgaggaagagccaatcggcagctccagccgcccatccacccctgacacactggactca
gacccggtcacctgtcccatcatacctggctgcgagaccaccatcgacatctccaagggc
cgcactggcctggggctcagcatcgtgggcggctgtgacactctgctgggtgccatcatc
atccatgaggtgtacgaggagggagccgcctccaaggatggacgtctatgggctggagat
cagatcctggaggtgaacggcatcgacctccgcgtggcgacccacgatgaggccatcaac
gtgctccgtcagacgcccccgcgggtgcgcctgtccgtgtaccgggacgaggcgcagtac
agggaggaggacatgtgggactccttctccctggagctcctcaagaagcctggccagggg
ctggggctcagcatcgtggggaggaggagcgacacgggggtgtttgtgtcggacatcgtg
aaggggggtgcggtggacagggacggcaggctgatgcagggagaccagttcctggcggtc
aacggcaaggacgtccgctccgccacccaggaggctgtggccgcgctgctcaagtgctgc
gcggggcccataaagctggatgtgggccgcttcaaagccgggcccttccactctgaaagg
aggatgtctcagagcagtcagatgagtgaaggcagctacaaggcgagccatgcctccctg
tcaggttccggaaacctccatggagatctggataaccgcagcaggagccaggactcactg
gatcgtcaggacgtcagggcggtggagtttaccaagggccccactgactctctgggcatc
agtatagcgggcggcatgggcagccctctgggcgacgtgcccatcttcatcgccatgatg
aaccccaccggcctggccgcgcagacacagaagctcaagataggggacaggatcgtgagt
atctgcgggactccggctgagggcatcagccatacgcaggcagtgaccctgctgaagaac
gccacaggaaccatcgagctgcaggtggtagcagggggggatacctccgtgacaggacct
ccacaggagcatgcagctgctggtctctctgtccctggtctcactccaagcaccatcttc
caggatgacttaggtcccccccagtacaagagcatcaccctggagcgaggtccagatggt
ctggggttcagcatcgtgggagggtttggaagccctcacggagacctgcccatatatgtg
aaaaccgtgtttggaaagggggcagcatcagaggacggccgtctgaagagaggagatcaa
atcatggctgtcaacggtcagagtctggacggggtcacccacgaggaggccgtgggcatt
ctgaagaggacgaaaggatccgtcaccctcactgtgctctcgtag
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