Osmerus eperlanus (European smelt): 134009609
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Entry
134009609 CDS
T10927
Symbol
si:cabz01101003.1
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04217
Necroptosis
oep04622
RIG-I-like receptor signaling pathway
oep04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
134009609 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
134009609 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
134009609 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oep01002
]
134009609 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134009609 (si:cabz01101003.1)
Enzymes [BR:
oep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134009609 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
oep01002
]
Cysteine peptidases
Family C67
134009609 (si:cabz01101003.1)
Ubiquitin system [BR:
oep04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
134009609 (si:cabz01101003.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
134009609
NCBI-ProteinID:
XP_062305147
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All DBs
Position
23:1153620..1162325
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AA seq
970 aa
AA seq
DB search
MSGAQEQRRRRPPKMFLVVSDLKFQDQLDGTIRLLRGNICQEQDAGRSRGEQIWVKVLDY
GCVVKIDKQYLTEVPSELSGLLEPVSDPESRLKLLANPRHLQRLASLPMGTPLLVHLSQL
GEPVEAELRYRGSMARGSSAVLFGIQLKGAAVGRGLSNGSYKGHQLFICPEASALFLPAN
QISLPRSSRGNSGEQHDRDHPSXNGHHDNHQRHPSVRAHPSPPFPPTAGVSVLPRTAESA
PLQTPALPRGPASPPPLQVGQRVCFPPLRNTVHGGEVRYCGPLPGRASLGMYVGILLDMP
VGNWDGSHKGDRLCHIPSPLYGHLLPLSKVSPEPKSRRQALPYANPALAPNSKLVLKLTQ
PTPGPTPPPVAPKPAPSAPLTSPPKTALMPPLLHSAKLVLKPPPPNKPANKPLPLPPIKA
QDPPSPTVLDQPQPLNGASPNALWSPGYGGVAEENEDPGLEVELEVGSMVEVNDPPLFGV
IRWIGQISGVPEPVAGSSWXDQELTAGTDGSYLGERHFRCPANKGLFVKLRNCRRDSRFP
APEMPVNQVERCNSIAFAEWGSERVEELTPPEEGEEARERYQGWKRGIQGHLNSCYLDAS
LFSLFSCCSSVDWVLLWPTDPEDGSHSSQAQDLLRCEIVNPLRRFGYVCASKTMALRRLL
EAENSDTGFTNQEKDPEEFLNKLFQLLRVEPLLKIRSMTQQPXECHLYQLFPPSVPLTPS
SPVPLSPPLSPLPLSSPPASLMRVASVQVLLETSFLHTGLKFTEAPSCLPLLMPRFGKDF
KMFDAILPSLSIDITDLLDDTLRQCSICQAVAEWECMQCFDDPDITPGKLKQYCHTCNTQ
VHSHRKRASHRPGQVGIPGGPWSGPPHAARQRMSLFAVTCIETSHYVSFVKHGPRPTDWL
FFDSMADREGGENGFNIPQVRACPEVGRYLSLSEEELSRIDPVSLRESVRRLLCDAYMCL
YHSPELSLYK
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggcccaagaacagcggaggcgtcgtcccccgaaaatgttcttggtggtgtcg
gacctcaagtttcaggaccagttggatggaaccattcggctactgcgggggaatatctgt
caggagcaggacgcgggaagaagtaggggagaacaaatttgggtgaaggtgctagattac
ggctgtgtggtgaagattgacaagcagtacctcactgaggttcccagtgagctgagcggc
ttactggagcctgtgtctgaccccgagtcccgcctcaaactgctggccaaccccagacat
ctgcagcgtttggctagcttgcccatgggcacacccctccttgtccacttgagccaattg
ggggagccggtggaggcggagcttaggtacagaggttcaatggccagagggagcagcgca
gtgttgttcgggatccagttgaaaggggcagcagtgggtcgagggctcagtaacggctcc
tataagggccaccagcttttcatctgccccgaggcctccgccctcttcctcccggccaat
cagatctccctgccgcgctcgtcccgcggcaacagcggcgagcagcacgaccgcgaccac
cccagcnacaacggtcaccacgacaaccaccaacgccacccctccgtccgcgcacacccc
tctccccccttcccccccaccgccggggtgagcgtcctccccaggacggcagagtccgcc
cccctccagaccccggccctgccccggggccccgcctcccctccacccctccaggtgggc
cagcgggtctgcttccccccactgaggaacacggtccacgggggggaggtgcgctactgt
gggcccctgcctggacgggcctccttggggatgtacgtcggcatcctgctggacatgccg
gtggggaactgggacgggtctcacaaaggggacagactctgccacatcccctcccctctg
tacggccacctgctgcccctctccaaggtgtctccagagcctaaatctcgccgccaagct
ctgccctacgccaaccccgccctcgcccccaactccaaactggttctgaaactcacccag
cccaccccaggaccaaccccaccccccgttgcccccaaacctgccccctccgcacctctc
acctccccccctaagaccgctttgatgccccccctgctgcactctgccaaactggtgctc
aaacccccgcccccaaacaaacctgccaataaaccgcttcccctgccaccaatcaaagcc
caggacccgccctccccgacggtcctcgaccaaccacagcccttgaacggagcctctccc
aatgctctgtggtcgcccggctacgggggcgtggcggaggagaacgaagacccgggattg
gaggttgagctggaggtgggatcgatggtggaggtgaatgacccgccccttttcggagtg
atccgctggattggtcagatcagtggcgttccggaaccggtggctggatcgagctggtag
gaccaggagttgaccgcggggacagatggaagttaccttggcgagcgccacttccgttgc
cccgccaacaaggggctgttcgtcaaactccgcaactgtagacgggactcccggttcccc
gccccggagatgcccgtcaaccaagtggagcgctgcaactccatagcgtttgccgagtgg
ggtagtgaacgtgtggaggagctcacccccccagaggagggggaggaggccagggagagg
taccagggctggaagagaggcatccagggccacctcaactcctgctacctggacgcttcc
ctcttcagtctgttctcctgctgcagctctgtagactgggtgctgctgtggcccactgac
cctgaggacggctcccactccagccaggcccaggacctcctacgctgtgagatagtcaac
cccctgcgcaggtttggctatgtgtgtgccagtaagaccatggccctcagacgacttctg
gaggctgagaatagtgataccggcttcaccaaccaggagaaagacccagaggagttcctt
aacaagctgttccagcttctcagggtggaacctctgctgaagatcaggtcgatgacccaa
cagcccnaggagtgccacctctaccagctcttccctccctccgtgcccctgaccccctcc
tcccccgtgcctctctccccccccctctcccccctccccctctcctccccccccgcctcc
ctcatgagggtggccagtgtccaggtcctcctggagacctccttcctgcacactggactc
aagttcactgaggccccctcctgcctccctctgctcatgcccagattcggcaaggacttc
aagatgtttgacgccatcttgccctcgctgagcatcgacatcaccgacctactggacgac
actctcaggcagtgcagtatatgccaggctgtagcagaatgggagtgcatgcagtgcttt
gacgatccggacatcactcctggcaagctcaaacagtactgccacacctgcaacacccag
gtgcactcccacaggaagcgcgcgtcccaccgccccggccaggtgggcattcccgggggc
ccgtggagcgggccgccgcacgccgcccgtcagaggatgtcgctgttcgccgtgacgtgc
atcgagaccagccactacgtgagcttcgtgaagcacgggccccgccctaccgactggctc
ttctttgacagcatggccgacagggaaggcggggagaacggcttcaacattccgcaggtg
agggcgtgtcccgaggtgggccgctacctcagcctatcagaggaggagctgagcaggata
gaccccgtctctctacgagagtccgttcgacgcctgctgtgtgacgcctacatgtgcctc
tatcacagtcctgagctaagcctgtacaagtga
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