Osmerus eperlanus (European smelt): 134009708
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Entry
134009708 CDS
T10927
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134009708 (sox19b)
Transcription factors [BR:
oep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134009708 (sox19b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134009708
NCBI-ProteinID:
XP_062305311
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All DBs
Position
23:488410..494353
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AA seq
294 aa
AA seq
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MYSMMEHELKPPGQQQSHQTSQGMSPVNGMVSSHPGSKSACPPGVDPMDKVKRPMNAFMV
WSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKDYPDYKY
KPRRKTKPLLKKDNQVGKYPLSAGNLLAAAAAQGQGGSPRMDSYGWGPTGGYAGMQGEAL
GYTQQLHRYDLSALQYPPAMTAQTYMNGGNSYSPMSYSSSPQQPSPVMSMVKPEPVSHSP
TGGHNPHRGPLQGDLRDMISMYIPGGDASDPASQRGYTSVQQHYLGGTMPLTHI
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtatgatggaacacgagctgaagcctcctggccaacagcagtctcaccagacc
tcccaagggatgtctccggtgaacggaatggtcagctcccacccgggatccaaatcagcg
tgtcctcccggagtggaccctatggacaaagtcaagcggcccatgaacgccttcatggtc
tggtcgcgtggccagcggcgcaagatggcccaggaaaaccctaaaatgcacaactctgag
atcagcaagaggctgggggcggagtggaaacttctcaccgacgctgagaaaagaccgttt
atcgacgaggccaagcggctccgggccgtacacatgaaggactaccccgactacaagtac
aagccccgtcgcaagaccaagcccctgctcaagaaggacaaccaggtgggcaagtacccg
ctgtccgcggggaacctgctggctgctgccgccgcccagggacagggtggaagcccacgg
atggacagctacgggtggggtcctactggcggttacgccggcatgcagggcgaggccctt
ggatatacccagcagctccaccgctacgacctgtcagctctacagtaccctccggccatg
acggcgcagacgtacatgaacggcggcaactcctacagccccatgtcctacagcagcagt
ccccagcagcccagtccggtcatgtccatggtgaagcccgagcctgtgtcccactccccg
acggggggccacaacccccaccgagggcctctccaaggggacctcagggacatgatcagt
atgtacatcccagggggggacgccagcgaccctgcctcccagaggggctacaccagcgtc
cagcagcactaccttggaggaaccatgcccctcacacacatctag
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