Osmerus eperlanus (European smelt): 134009740
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Entry
134009740 CDS
T10927
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04814
Motor proteins
oep05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
134009740
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134009740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134009740
03036 Chromosome and associated proteins [BR:
oep03036
]
134009740
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oep04812
]
134009740
Membrane trafficking [BR:
oep04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
134009740
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
134009740
Cytoskeleton proteins [BR:
oep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
134009740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Vps39_1
DUF4172
Motif
Other DBs
NCBI-GeneID:
134009740
NCBI-ProteinID:
XP_062305355
LinkDB
All DBs
Position
23:complement(378239..398046)
Genome browser
AA seq
1293 aa
AA seq
DB search
MSGAEGAGRPARVGSLVEVIGKGQRGTVAYVGATLFASGKWVGVILDEAKGKNDGTVQGK
RYFTCEENHGIFVRQSQIQLVDEGSSTPSPDTPEAPTSSKVLRQKDIPETPKSTKQTSAL
KKSSTRRPTKSVTESQWSTPGRLVSASSLPSLLVRPGSFPSLLVRPGSFPSRLVTPKPSG
LSTSLSGDVSEAGLSQSALGAPVVPLPSGSSATPGAPPPATSSKGESVVYKQEEDSLRGQ
LKDLEEKLETLRMKRSEDKAKLKELEKSRIQLEQLQEWRSKMQEQQTDLQRQLKDAKKDA
LEALEGKERYMEEMADTADAIEMATLDKEMAEERAESLTVEVESLKEKVEELTMDLEILK
HEIEEKGSDGAASSYHVRQLEEQNSRLKEALVRMRDLSSSEKQEHVKLQKQMEKKGGELE
VLRTQREKLQEEMKQAEVTIDELKEQVDAALGAEEMVETLTERNLDLEEKVRELRETVTD
LEAINEMNDELQENGRETEMELREQLDLAGARVREAQRRVEAGQETLADYTHTISKYREL
TSSLQETNRELTNQQSASAEQEQPPAELFDFKIKFAETKAYAKAIEMELRKMEVSQANRQ
VSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAELISKQAQEKFDLSVTPVVRPGMRG
PPGEQLSFASGLVYSLNLLQATLHRYQGALSSCSVEVYKRMGTLYSEMSVHERSLDLLID
LLHKDQLDETVNVEPLTRAIKYYQQLYSIHLSERAEDCTVQLGDHIKFTQSALDCMGVEV
GRLRAVLQAGQEGADLSILLRDLDTSCSDIRQFCKKIRRRMPGTDVPGVPAALAFPTQVS
EALAEARGQLGRVVAVLQELGAAGAQTVAPLGESEGLSALSLEEVTIKAVEQVYGCHGDN
PHESLRQSCSSVISTMNKMATAMQEGEYDSERPHAQTPPVELRAASLRAEITDAEGLGAR
LEDRDTVIKEVKKSLKIKGEELSEAHVRLSLLERKLDTSTRDADERVEKIQTRLDDSLAL
LKKKEKEFEETMDALQADIDQLESEKAELKQRLTSQSKMTIDGLRAQPTSGIASIVTGTA
GAAPPAAGSLSGPLQVVDSPLLKQQLEAQRLGIKHLKNENNRLKAEKMRAQLASLPPLHV
PHWTPPKEGPPPSSPPPPEGLEGALYRKTDQLLATLLRMSAGVRVVDITGKTPVSASAQL
LEQTARLQSLRDALDRLKGEVAEHVVSQQPGAKVSSDFATFPVSSFVKAKQEKQEGTVFV
GRVSIPCARGQEQVHRLVLSQQHLQQVHRLLMN
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagcggagggcgcaggccgcccggccagggtgggctccctggtggaggtgatc
gggaagggccagcggggcacggtggcctacgtgggcgccacgctgttcgcctcgggcaag
tgggtgggcgtgatcctggacgaggccaagggcaagaacgacggcacggtgcagggcaag
cgctacttcacctgcgaggagaaccacggcatcttcgtacggcagagtcagattcagctg
gtggacgagggctccagtaccccctctccagacacaccagaggcccccacctcctccaag
gtcctcaggcagaaagacattcctgagactcccaagtcaaccaagcagacatctgccctt
aagaagtcctcaacccgccgtccgaccaagagcgtaacagagtctcagtggagcaccccg
ggccgcctcgtctctgccagctccctcccctccctcttggtacgtcccggcagcttcccc
tccctcttggtacgtcccggcagcttcccctcccgcctcgtgactcctaagccttccggc
ctctccacctctctctctggtgatgtcagcgaggcggggctatctcagagtgccctgggg
gctcctgtcgtcccgctgccgagcggctcctccgccacgcccggagccccgcccccggcc
acgtccagcaagggggaaagtgtcgtttacaagcaggaggaggactccctgcggggccag
ctgaaggacctggaggagaagctggagaccctgaggatgaagcgctcggaggacaaggcc
aagctgaaggagctggagaagagccgcatccagctggagcagctgcaggagtggaggagc
aagatgcaggagcagcagaccgacctgcagagacagctgaaggacgccaagaaggatgcg
ctggaggccctggaggggaaggagcgctacatggaggagatggcggacacggcggacgcc
atcgagatggccacgctggacaaggagatggcggaggagcgggcggagtccctcacggtg
gaggtggagtcgctgaaggagaaggtggaggagctcaccatggacctggagatcctgaag
cacgagatcgaggagaaaggttcggacggagcagcctccagctaccacgtcaggcaactg
gaggagcagaacagccggctgaaggaggcgctggtcaggatgcgggacctgtcgtcgtcg
gagaagcaggagcacgtgaagcttcagaagcagatggagaagaagggtggagagctggag
gtgctgaggacccagagggagaagctgcaggaggagatgaagcaggccgaggtcaccatc
gacgagctcaaggagcaggtggacgcggctctgggggcggaggagatggtggagaccctg
acggagaggaacctggacctggaggagaaggtcagggagctgagagagaccgtcacagac
ctggaagccatcaacgagatgaacgacgagcttcaggagaacgggcgtgagacggagatg
gagctgcgagagcagttggacctggcgggggcgcgggtcagggaggcccagcgcagggtg
gaggccggccaggagaccctggctgactacacacacaccatcagcaagtacagggagctg
acctccagcctgcaggagaccaatcgggagctgaccaatcagcagagtgccagtgcagaa
caggaacagcctccagctgagctgtttgacttcaagatcaagtttgcagagaccaaggcc
tacgctaaggccatagagatggagctgaggaagatggaggtgagccaggctaacaggcag
gtatccctgctcacctccttcatgcccgactccttcctgcggcacggaggagaccacgac
tgcatcctggtgctgctgctcatcccccggctcatctgcaaggctgagctaatcagtaag
caagcccaggagaagtttgacctgagtgtgaccccagtggtgcgccctgggatgcgaggt
cctccgggagagcagctcagctttgcctccggcctggtgtactctctgaacctgctgcag
gccacgctgcaccgctaccagggagccctgagcagctgcagtgtggaggtgtataagagg
atggggactctgtactctgagatgagtgttcacgagcgctctctggacctgctcatcgac
ctgctgcacaaggaccagctggacgagactgtcaacgtggagcccctgaccagggccatc
aagtactaccagcaactgtacagcatccacctatcagagcgggctgaggactgcaccgtt
cagctgggagaccacatcaagtttacccagagtgccctggactgcatgggcgtggaggtg
ggtcgtctgcgggccgtcctgcaggcgggacaggaaggggcggatctctccatcctgctc
agggacctggacacttcctgtagtgacatcagacagttctgtaagaagatccgacgtcgc
atgcctggaaccgacgtccccggggtgccggccgcgctggccttcccaacgcaggtgtcg
gaggcgctggcggaggcgcggggccagctgggccgcgtggtggccgtgctgcaggagctg
ggggcggcaggagcccagacggtcgctcctctgggggagagcgagggcctgagcgccctg
agtctggaggaagtcaccatcaaggctgtcgagcaggtgtacggttgccacggtgacaac
ccccacgagagcctgcgtcagtcctgcagctccgtcatctccaccatgaacaagatggcc
accgccatgcaggagggggagtacgactctgagagaccccacgcacagacccccccggtg
gagctgcgcgctgcctctctcagggctgagatcacggacgccgaggggctgggagcccgt
ctggaggacagggacaccgtcatcaaggaggtcaagaagtccctcaagatcaagggtgag
gagctgagcgaggcccacgttcgtctcagtctgctggagaggaagctggacacgtccacc
agggacgcagacgagagggtggagaagattcagacccggctggacgacagcctggccctg
ctcaagaagaaggagaaggagtttgaagagaccatggacgccctgcaggccgacatcgac
cagctggagtctgagaaggcggagctaaagcagcgtctcaccagccaatcaaagatgacc
atcgacggcctcagggcccagcccacctccggcatagcctccatcgtcacgggaacggca
ggagcggctcccccagcagcaggctctctgtctgggcctctgcaggtggtggactccccc
ctcctcaaacagcagctggaggctcagaggctgggcatcaaacacctgaagaacgagaac
aacaggctcaaggcggagaagatgagggctcagctggcctccctgccccccctccacgtc
ccccactggaccccccccaaggagggcccccccccctccagccccccccctcccgagggg
ctggagggggccctctaccggaagactgaccagctgctggccactctgctgcggatgagc
gccggggtcagagtggtggacatcaccggcaagacccctgtcagtgccagtgcccagctg
ctggagcagactgctcgtctgcagagcctcagagatgcgctggacagactcaagggggag
gtagcagagcatgtcgtctctcagcagcctggagccaaggtctcctctgacttcgccacc
ttcccagtctcttcctttgtcaaggccaagcaggagaagcaggagggcacggtgtttgtg
gggcgtgtctccatcccctgcgcccggggccaggagcaggtccaccgcctcgtcctatca
cagcagcacctgcagcaggtgcaccgcctcctcatgaactaa
DBGET
integrated database retrieval system
