Osmerus eperlanus (European smelt): 134009795
Help
Entry
134009795 CDS
T10927
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03013
Nucleocytoplasmic transport
oep03015
mRNA surveillance pathway
oep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134009795 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
134009795 (acin1b)
03015 mRNA surveillance pathway
134009795 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134009795 (acin1b)
03041 Spliceosome [BR:
oep03041
]
134009795 (acin1b)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134009795 (acin1b)
Spliceosome [BR:
oep03041
]
Complex C
Other components
EJC/TREX
134009795 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
SR-25
DUF3591
Motif
Other DBs
NCBI-GeneID:
134009795
NCBI-ProteinID:
XP_062305474
LinkDB
All DBs
Position
23:2319632..2340956
Genome browser
AA seq
1417 aa
AA seq
DB search
MAELEDVTLDGKPLHSLRVADLKLALEQRNLPKSGQKNALIKRLKGALMLENLQRTSTPH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAAEADESPAIPEEMDLTGGN
DGGSYLQDKHHPMPSQPPLTRAEEEGGGLPGGPLMMGQGMMGQGVMGQGMMGQGMMGQGM
MGQGMMGQGMMGQGMMGQGMMGQGMMGQGMMGRRPDFSSGSVPQESSDTPGGRIQRPPLH
PGHEEPATPSPPRAVASLSVRVLGQPERQGLPPSMPRPQEKEGIAPSEPGSAHPVLHQSR
SARAAAGRAHDESDDDDDDDDDDSEEDEEWGPAAGARRGGGGRAPPMPPQPSPSVPTAGR
ERSRRKLQPPQHIPPQQVHQPPMLRQPTPPPSPPPELSFPLPDTPKQSPPDMDEPEGAGP
GMAGGAARPPPGLQRQDSDSSSRSSSPEPPQQRRPGPLSLLARKMESEGAFGAEGRKRGE
DGQAGPVMAGSGESLPGVGDGPSVVVFPGSALAHTGSSAGHVVPVPELLAPVDMSATRPT
AVPTITLGSASELQRQAEREKGQTEERKEKESSLPPWKRGRDFTSATLSAAAASQVGAEE
PPGDQGGSATSPQTSRKSFFQRDTPQAPTSPPGTTRRPRMFSDTSTGSMVSPAKLEHPLR
QGVLVSGPQSADMEVTATPPDKASPKKPDGNDVEMPNMELKKRGPLEFKDVPVKSQLEPM
GPVLPPVAPAGKVAERGRQEKKDRGKKSPVSSDSSSSDSDSGSSSSGSSSSSSQDKSRPT
RLKKKAAPGKGDGKGGQVKGQSKKLPAREVKSQPSGPSVMEVDQDSESSPAQAVQEADPD
RSEGRLEESSTPKAFAARKISLTSEYTRLQTTGSKTSPVGGEAGAGEAESGGLGGRKRRW
GSSTAVTTKKPSISITTDSLKSLIPDIKASQEAVVELHPEELHLSGEEEEEERGEEDTPS
RENREDQGLDKGLQIRRTVTQVVPGEGQKNGQRDQRDEEEEEKRDQERGRTRKDRRKSSA
SEDALKTEPSTKDTDAQKVTPSDTLVRRSISQQKSGVSITIDDPVRLAKQPSPPRGKVSK
IVHVSNLVRPFTLGQLKELLNRSGSLVEEGFWIDKIKSHCYVTYATTEEAVATRAALHGV
KWPQSNPKVLSVDFCEQEELDFHRGLLVVERAGEEPHPGGPHGRPAALPPLMPERGGLGG
VRDQWAEREREMERRERTRAEREWDRDKIRDFGRPGEEGRRSPSRERRRKERGKSKEKKT
DKKAEKGDEPPVKLLDDLFQKTKAAPCIYWLPLSEEQAAQRVLDRAERQKERERRRKELQ
EEEEKKREEERKERVKNREKEGGAAAAAGGAGGAGGAGRGVEGDKDRERERDKGRERGRD
REGGDKRREGYRPRAPSGGVVAGRRSRSRSNPRDRRR
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacttgaagatgttacgctggatggtaaacctttacattcgcttcgtgtggcg
gatttaaaactcgctttggaacaacgaaatttgccaaaaagcgggcagaaaaatgcactt
attaagcgactgaaaggggcactcatgttggagaacctccagagaacatcaactcctcac
attggactccagcccaactcccagataggggaggagatgagtcagaacagctttataaaa
cagtacctggccaaacagcaggagctgcttcggcagaggcttgagagagaggccagggag
gctgcggaggccgacgaaagcccggccatcccagaagagatggacctcacagggggcaac
gacggggggtcctatctccaagacaagcaccacccaatgccctctcagcctccattgacc
agggcagaagaagaaggaggtggactgccaggaggtccactgatgatgggccaggggatg
atgggccagggggtgatggggcaggggatgatgggtcaagggatgatgggccaggggatg
atggggcaggggatgatgggccagggaatgatgggccagggaatgatgggccaggggatg
atgggccaggggatgatgggtcaagggatgatgggtcgcaggccagacttcagctctgga
tctgttccccaggaatcctctgacacccctgggggccgtatccagcgccctcccctccac
ccaggccacgaagagcccgccaccccctccccaccccgggcagtggcctccctgtcagtg
cgtgtcctgggccagcctgagcgccaaggcttgcccccctccatgccccgcccccaggag
aaggaaggcatagccccctcagagccaggctccgcccaccccgtgctgcaccagagccgg
tccgcccgtgcggcagccggccgcgcccacgacgagagcgatgacgatgacgacgatgat
gacgacgacagcgaggaggatgaagagtggggcccggcggcgggggcgaggagaggtggg
ggtggacgagccccccccatgcccccacagccctcccccagtgtcccaacggccggccgg
gagagatccagacgcaagctccagcccccgcagcacatccccccacagcaggtacaccaa
ccccccatgctgcgccaacccaccccacccccgtctccacccccagagctctccttcccc
ctccctgacacccccaagcagagcccgcccgacatggatgagccagagggagcagggccc
gggatggcaggcggggcagctcgcccccctccagggctccagaggcaagactccgactcc
agttcccgctccagcagcccagagccgccacagcaacgccggcctggccccctctccctg
ctggcccgcaagatggagtccgagggagcctttggcgcggagggacggaagagaggcgag
gatggccaggcgggtcctgtcatggctggctcaggagagagcctgcccggggtaggagat
gggccaagtgtggttgtgttccctggaagtgctctcgcccacacaggcagctcagcaggt
cacgttgtccccgtacccgagcttttagccccggttgacatgtcggcgactcgtcccaca
gccgtccccaccatcaccctcgggtccgcctcggagctccagagacaggctgaaagggag
aagggacaaacggaggagagaaaagaaaaggagagcagtctgccgccgtggaaacgtgga
agagacttcacctccgcaaccctctctgctgcagccgcatctcaggtgggggcagaggaa
cctccaggagaccagggggggtcggccacgtccccccagacgtccaggaagtcattcttc
cagagggacacgccccaggcccccacctcccctccaggcaccacaaggaggccccgcatg
ttctccgacacctccaccggttccatggtgtcccccgccaagctagaacaccctctccgc
cagggggtgctggtctcaggaccccagtccgcagacatggaggtcaccgccacaccacct
gacaaggcgtcccctaagaagccagacggaaatgatgtggagatgcccaatatggaactc
aagaagaggggtccgttggagttcaaggatgttccagtgaagagccagttggagcctatg
ggacctgtgttgccccctgtagccccagccggtaaagtggcagagagggggaggcaggag
aagaaggatagaggcaagaagtcccctgtctccagcgactcttcatcctccgactctgac
tctggatcgtcttcatcaggatcctcctcttcctcctcccaggacaagtcccgccccacc
aggctaaagaagaaggccgccccaggaaagggggatggaaaaggaggacaagttaaagga
cagtccaaaaaactccctgcaagggaggtgaagtctcagcccagtggcccttcggtgatg
gaggtggaccaggactctgagagctccccagcccaggccgtccaggaggccgaccccgac
cgcagtgagggccgtctggaggagagctctactcctaaggcttttgcagcccgcaagatc
tccctgaccagtgagtatacccgtctccagaccacaggcagcaagacttctccagttggc
ggcgaggccggtgcaggggaggcggagtcaggagggctgggcgggaggaagaggaggtgg
ggctccagcacagccgtcactaccaagaagccgtccattagcatcaccaccgactcactg
aagtctctgatcccagacataaaggccagccaggaggcggtggttgagctgcacccagaa
gagctgcacctgtctggggaggaggaggaggaagagaggggtgaggaggacaccccctcc
agggagaacagggaggaccagggcctggacaagggcctgcagatcagacgcacagtcact
caggtggtccctggcgagggccagaagaacgggcagagagaccagagggatgaggaagag
gaggagaaacgggaccaggagagaggaaggacacgcaaggacaggaggaagagcagcgct
tcagaggacgccttgaaaaccgagccctccacaaaggacacggacgcccagaaagtcacc
cccagcgacaccctggtgcgtcgctccatcagccagcagaagtccggcgtgtccatcacc
atcgacgaccccgtccgcttggccaagcagccctccccgccccgcggcaaagtctccaag
atcgtccacgtttccaacctggtgcgacctttcaccctgggccagcttaaggagctgctg
aaccgcagcgggtccctggtggaggagggcttctggatcgacaagatcaagtcccactgc
tatgtcacttatgccactacagaggaggcggtggccaccagggcagccctccatggggtg
aagtggccccagagcaaccctaaagtcctcagcgtggacttctgtgaacaggaagagctg
gacttccaccggggtctcctggtcgtggagcgggccggagaggagccccacccggggggt
cctcacggccggccggccgccctgccccccctgatgcccgagcgcggcgggctgggaggg
gtgcgggaccagtgggcggagcgagagagggagatggagcgtcgagagaggacccgggcc
gagagggagtgggaccgggacaagatccgagacttcgggaggccgggggaggaggggagg
cgctcgccctcccgggagaggaggaggaaggagagggggaagagcaaggagaagaaaacg
gacaaaaaggcggagaaaggagacgagcctccagtcaaactgcttgacgacctgttccag
aagaccaaagcagctccatgtatatactggcttcccctctcagaggagcaggcggctcag
agggttctggaccgcgccgagcggcagaaggagagagagaggcgacgaaaagaactgcag
gaggaggaggagaagaaacgcgaggaggagcggaaggagagggtcaaaaacagagagaag
gagggtggggcagctgctgctgctggaggagcaggaggagcaggaggagcgggcagagga
gtggagggagacaaggatcgagagagggagagagacaaggggagggagcggggcagggac
agagaggggggggataagaggagggaggggtacagaccccgcgccccctccgggggcgta
gttgccggacggcgttctcgtagtcgtagcaacccccgagacagacgccgctga
DBGET
integrated database retrieval system
