Osmerus eperlanus (European smelt): 134009978
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Entry
134009978 CDS
T10927
Symbol
cnga1b
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
134009978 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134009978 (cnga1b)
Ion channels [BR:
oep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
134009978 (cnga1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Presenilin
Sec62
MDM10
DUF7310
CDC45
NPR3
Tim54
PFF1_TM
CLN3
DUF5427
PPP4R2
RR_TM4-6
ADI
DUF4746
Spore_coat_CotO
Zip
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
134009978
NCBI-ProteinID:
XP_062305763
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All DBs
Position
23:107373..114823
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AA seq
648 aa
AA seq
DB search
MSVRVTPAGPAPTGSAPTLILPRIILTDMEEEHGSTRSGPVLFNINNSNNNEEEEEKKKK
KKEKKEKKERKEKREKEKQEKRERKEQEKKEKEEKEKKEKEEKEKKEKEEKAKAEAPKEI
TAIDPAGNIYYNWLFIITMPVMYNWTLIIARACFEELQLEYLVYWFILDYTSDVIYVADM
FFRTRTGYLEQGLLVKDEKKLRDRYFNSLQFKLDLVSMVPTDVFYLALGINYPEIRLNKL
FRINRMLEFFQRTETRTNFPNVLRISNLVMYIVIIIHWNACLYYSVSKAIGFGSDAFVYP
NVSHPEFGRLVRKYAYSMYWSTLTLTTIGETPPPVQNSEYFFVVTDFLVGVLIFATIVGN
VGSMITNMNAARADFQARIDAIKQYMSFRKVTKDLEKRVIKWFDYLWTNKKAVDEREVLK
FLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGRE
MYIIKEGKLAVVADDGIKQFVVLSDGSYFGEISIMAIKGSRAGNRRTANIRSIGYSDLFC
LTKDDLMEAMTEYPDAKAMLEEKGRQILMKDGLLDLEVAMQGPDPKDMEEKVEKMASMLD
ALQTRCARLLAQQEALQGKLKRRVTRLEKKIVPPEAPAPEAPAEEERK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtacgggtgaccccagctggccccgcccccaccggctccgcccccaccttgatc
ctgccccgcatcatcctaacagacatggaggaggaacacggctccacacggagcgggcca
gttctgttcaacatcaacaacagcaacaacaatgaagaggaagaagagaagaagaagaag
aagaaagaaaagaaagaaaagaaggagagaaaagagaagagggagaaagaaaagcaggag
aaacgggagagaaaagagcaggagaagaaagagaaggaggagaaggagaagaaagagaag
gaggagaaggagaagaaagagaaggaggagaaagccaaagcagaagctccaaaagagatc
acagccatagatccagcaggaaacatttactacaactggctattcattatcaccatgcct
gtcatgtacaactggaccctcataatagccagagcgtgttttgaggagctgcagctagaa
tacctggtctactggttcatcctcgactacacttctgacgtcatctacgtggctgacatg
ttcttcaggactcggaccgggtacctggagcagggcctgctggtgaaggatgagaagaag
ctgagagatcgttacttcaacagcctgcagttcaagctggacctggtctccatggttccc
actgatgtgttctacctggccctagggatcaactacccagagatacgcctcaacaagctc
ttcaggatcaaccggatgctggagttcttccagcgcacagagacacggaccaacttcccc
aacgttctgcgtatctccaacctggtgatgtacatcgtcatcatcatccactggaacgcc
tgcctgtactactctgtgtcaaaggccatcggcttcggctccgacgccttcgtctacccc
aacgtgtcgcacccggagtttgggcgcctggtgaggaagtatgcctacagcatgtactgg
tccacgctcaccctcaccaccataggagagactccaccacccgtacagaactccgagtac
ttcttcgtggtcacagacttcctggtgggagtgctgatctttgccaccatcgtgggaaac
gtgggctccatgatcaccaacatgaacgcggccagggcagactttcaggcgcgcatcgac
gccatcaagcagtacatgagcttccgcaaggtgaccaaggacctggagaagcgggtgatc
aagtggtttgactacctgtggaccaataagaaggctgtggacgagagggaggtgctgaag
ttccttcctgacaagctgagggcagagatcgccatcaacgtccacctggacaccctgaag
aaggtgcgtatctttgcagactgcgaggcagggctactggtggagctggtgctcaagctg
cagccgcaggtgtacagccccggagactacatctgcaagaagggagacatcggccgcgag
atgtacatcatcaaggaaggcaagctggcggttgtcgctgacgacggcatcaagcagttt
gtggtccttagtgacgggagctacttcggggagatcagcatcatggccatcaagggcagc
cgggcagggaaccgcaggaccgccaacatacgcagcatcggctactccgatctgttctgc
ctcaccaaggacgacctgatggaggccatgacggagtacccggacgccaaggccatgctg
gaggagaagggcaggcagatcctgatgaaggacggcctgctcgacctggaggtggccatg
cagggcccagaccccaaggacatggaggagaaggtggagaagatggcgtcgatgctggac
gccctgcagacacgctgcgcccggctgctcgctcagcaggaggccctgcaggggaagctg
aagcgcagagtcacccggctggagaagaagatcgtcccccccgaggcccctgcccccgag
gcccccgcagaggaggagaggaagtag
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integrated database retrieval system
