Osmerus eperlanus (European smelt): 134009992
Help
Entry
134009992 CDS
T10927
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep00310
Lysine degradation
oep00514
Other types of O-glycan biosynthesis
oep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
134009992 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
134009992 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oep01003
]
134009992 (colgalt1a)
Enzymes [BR:
oep01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
134009992 (colgalt1a)
Glycosyltransferases [BR:
oep01003
]
O-Glycan biosynthesis
O-linked Gal type
134009992 (colgalt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
134009992
NCBI-ProteinID:
XP_062305805
LinkDB
All DBs
Position
2:7152169..7159946
Genome browser
AA seq
607 aa
AA seq
DB search
MHRFISLLPTLLTLLSGPAQGYFPEERWSPESPLLAPRVLIALICRNSEHSLPYFLGTIE
RLNYPKDRVALWVATDHNVDNTTAILRDWLIKVQNLYHYVEWRPQEDPVGYEDEESPKQW
TNLRYAHVMKLRQAALESAREMWADYFLAVDCDNLLTNPNVLWKLISENKTIVAPMLESR
AAYSNFWCGMTSQGYYKRTPAYIPIRKQVRKGCFAVPMVHSMFLVDLRKEASRQLAFHPP
HPDYSWAFDDIIVFAFSARMADVQMFVCNSETYGYFPVPLRSHNSLKDEADSFLHSLLEV
NVRNPPTMPSIYIPAPRRQPDKLGFDEVFMINLQRRTDRRDRMLSTLYEQEIACKVIAAV
DGTAMNVSEVNDLGIHMLPGYSDPYHGRPLTKGELGCFLSHHNIWKEIVERGLKTSLVIE
DDLRFEVFFKRRLQNLMMEVDSQNLDWDLIYIGRKRMQVEHPEKSVPNIHNLVEADYSYW
TLGYMMSLQGAQKLLKAEPLKRMLPVDEFLPVMYNKHPVSDYMEQFETRDLKAFSAEPLL
VFPTHYTGDPGYISDTETSTVWDNEKVRTDWDRGRSGKTQEQAEISTEAQNSDVLQSTLD
STARDEL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcttcatctcactgctgcccaccctcctaactctcctctccggaccagcccaa
ggatattttccagaagagcgttggagccccgaatccccccttctcgccccgcgtgtactg
attgctctcatctgccgaaactcagaacattctttgccttatttccttggaactattgaa
cgtctaaactacccgaaagaccgcgttgcactatgggtcgcgaccgaccacaatgtggac
aacactactgccattcttcgggactggctcatcaaagtacaaaacctgtaccactatgtg
gagtggaggccacaggaggatcctgtaggatatgaggatgaggaaagtcccaaacagtgg
acgaacctgcgctacgcccatgttatgaagctccgacaggcagcgctggagtccgcccgt
gagatgtgggcggactacttcctggctgtggactgtgataacctcctgaccaaccccaat
gtcttgtggaagctcatcagtgaaaacaagaccattgtggctcccatgctcgagtcccgc
gccgcatattccaacttctggtgtgggatgacttcccagggttactacaagcgcactcct
gcctacatacccatacgaaagcaggtgcgaaagggttgctttgctgtgcccatggtccac
tccatgttccttgtagacctgaggaaggaggcttccaggcaactggctttccacccaccg
catccagattacagctgggccttcgatgacattattgtatttgccttctctgctcgcatg
gcagatgtacaaatgtttgtatgcaacagtgaaacctatgggtacttcccagtgccattg
cggtcccacaactccttgaaggacgaagctgacagttttctgcattccttgttggaagtt
aatgtgcgaaaccccccaacgatgccttccatatacatacctgcccctagacgacaacca
gacaaacttggctttgatgaggtgtttatgataaacttgcagcgaagaactgaccgcagg
gatcgcatgctaagtacactgtatgagcaggagatcgcctgcaaggttatcgcagctgtg
gacggcacagcaatgaacgtcagtgaggttaatgacctgggcatccacatgctcccaggc
tacagtgacccctaccatgggcgccctctgaccaagggagagctgggatgcttcctctcc
catcacaacatctggaaagagattgtggagcggggtttgaagacctccttggtgattgaa
gatgatctgcgctttgaggtgttctttaagcgtcgcttgcagaacctgatgatggaagtg
gacagccagaatctggactgggatctcatttatattggacggaagagaatgcaggtggaa
cacccagagaaatctgtacccaatatccataacctggtagaggcggactactcctattgg
acgctgggatatatgatgtcattacaaggcgctcagaagctcctgaaagcagagccttta
aagagaatgctgccagtggatgagttcctcccagtcatgtacaataaacatcctgtctca
gactacatggagcagtttgagaccagggacctgaaggctttttcggcagaacctctgctg
gtgttcccgacccattacacaggtgacccgggctatattagcgacacggagacctccacc
gtgtgggacaatgagaaggtccgtacggactgggacaggggccgctcagggaagacccag
gagcaggcagagatcagcacagaagcccagaactctgatgtcctccagtctaccctggac
agcacagcaagggacgagctatga
DBGET
integrated database retrieval system
