Osmerus eperlanus (European smelt): 134010046
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Entry
134010046 CDS
T10927
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep00310
Lysine degradation
oep01100
Metabolic pathways
Brite
Enzymes [BR:
oep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
134010046 (prdm2b)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
134010046 (prdm2b)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
134010046 (prdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134010046
NCBI-ProteinID:
XP_062306039
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All DBs
Position
1:12636229..12646354
Genome browser
AA seq
1733 aa
AA seq
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MADAGETVETLLDILHHIWKSLPSAIILRPSSVNQSRIGEMWMLSCKRFGPFVGERKKRS
QVTSNVYLWEVYFPARGWMCVDATDPMKGNWLRYVNWARSNHEQNIFPLEINRAIYYKVL
RPIGPGEELLVWYSGEDNPEITAALEEEKASSLCKKNSPRAKRARRKLLVRARRTGWGGF
RGPKRTGGTQSSTTDMWDTEDGPNEEEERQSSPGPSQEAVEPSPKPSPGPSLSQVQAFTM
EDKQEVEQDEGPGEHQQPVAVAEPEESPELPVLPQSHSTPPQEEEEEDEEEEDEEEEGGM
TGVPPPQCYTKTAPSSVKRPEPKADPDPDLDLDAQDETHPCQHCERHFSTKQGLERHIHI
HATVNQQTHAFKCRYCGKSFGSQVGRRRHERRHENVSKKRPGSLAGTATLLSPRAQVDGP
SPDRVTASGHHVVARSPFQIPAAPLPTSEMVRKDSVEGDRPFIVDENGESKELHPCKYCN
KAFGTHTNMRRHQRRIHERHLLPKGVRRKGMLLQESPTPPQQPDESPSTSPPLVYVPSAD
TEDEADRDDYVVDISKNISENLSLYIDGKILSTSSVSSCDVIEVDSSSAALFGLDTVILS
PSDICQALKVDTRTGSVRQVSNLIGQSTSKRRTSTPPLMPGMKMETDTGNSSASSSCSTS
SSSTLLMGGLFQKEKTIYLSPKLKQLLQTQDSHKPTITLITDSHTAPVSVTSSSGGSGRF
KRRTASPPSSPHLSPALKGESAKSEAGSGSGSSYTLKVPKLENLNLSTAWSLTSKDDRDT
MNPSGKDNRGWPASSSSGGNSCNQQPLDLSSSVGRKNEGSNKASGESVLDLSMHRKSGAA
ELESKGIPAAVQPPAKKKKPNTSMLEKVLMSEYAGLTTSADDGSLNLGSPDSQYTAGSGT
GTCSHSTSPNMVSDSAHPSPPSLTPVTMNPSSPSTSLACPTPPPPVLPTIPSPPGMPSSP
HSQPSDCSTLRSLPVLSPKMSPTSVDHGDEEPASKPVSDTEETSLGEDHCEDELMAQSPD
PTPDPVRDLRKGQSKPSPPREAISLDLSTTEPGVARRTRNGSSLLNGKVSKGTASESKSQ
HSDLSVLSESLSGPSASPPALSDRPSPPVIKKEPRHADTAHGALPPVGKPTEAEEQEDGG
GDAFSKSFVCNVCDGPFRSIKELSRHIVAHAADWPYKCEFCVQLFGDAAALLEHRTALHG
VGRIFVCSACRKEFAFLCNLQQHQTDLHPNQECTHAAVESGKLRPQNYTDPSKATEESSA
DAPKPESPEQAQSQGMDVMAEEEPSVNGKHGDEGGDDPTEELYTTIKIMASEGGKPKGPD
VRLGINQHYPSFKPPPFPYHNRTHATSVASATNFTTHNIPQTFSTAIRCTKCGNSFDNMP
ELHKHILACANASDKRRYTPKKNPIPLRQIVKPQNGVLSPAATAAVAGSVGQNAFRRMGQ
PKRLNFNQEATGKTRMTSLSKKKNQLVQKAITQRNKSAASVRKTFVKVEEEEEEAQPAPP
QQEVHVCPHCSREFTYPASLSKHIAVSCPMKPAAKKGKRGAAEDKRAGADAASDKNMSLR
RRATDAELQQPEPGSKPLRKTRARSSGAPEAEPPQATKGKAAGRPKRPASFPAAVVPPRK
KGRKGQAPFLPPTPSSSDVPTSEPAPRPAGRMGRVGKEVAPKKVSEVKSLQEQSQTQVKK
EVQGERFSLRARERAGGPVTRSLQLASFAGPVEVKTEEQSSQEPKDPKESLQK
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgctggtgagacagtagaaactctccttgacattctgcaccatatttggaag
agcttacccagcgctataatactaagaccctcttctgtcaatcaaagtcgtattggtgag
atgtggatgctatcttgcaaaaggtttggcccctttgtaggagagaggaagaagagatcc
caggtgaccagcaatgtttacctgtgggaggtatatttcccagcaagaggctggatgtgt
gtggatgccacagaccctatgaagggtaactggctacggtatgttaactgggcacgctcc
aatcatgaacaaaatatttttcctctggagatcaatcgagctatttactacaaagtatta
aggccaataggacctggtgaagagctgttagtctggtacagtggggaagacaaccccgag
ataacagctgcattggaggaagaaaaggccagcagtttgtgcaagaaaaactcacccagg
gcgaaacgagctcgaagaaagttactggtgcgagccagacggactggttggggtggattc
cgaggacccaagcgaacaggaggaactcagtcttccaccactgacatgtgggacacagag
gatggtccaaatgaggaagaggagaggcagtcatctccaggaccctcccaggaggctgtg
gagccctcgcccaagccgtctccaggcccctctctgtctcaggtccaggctttcacaatg
gaggacaagcaggaagttgaacaggatgagggtccaggggagcatcagcagcctgtagcc
gtggctgagccagaggagagcccggagctgcctgtcctgccacaaagccatagcaccccc
cctcaggaggaggaggaggaggatgaggaggaggaggacgaggaggaggaaggggggatg
actggggtccccccccctcagtgttacacaaagacagccccctcctctgtaaagagacct
gaaccaaaggcagaccctgaccccgaccttgaccttgatgcccaggatgagacgcacccc
tgccagcactgcgagcgccacttctccaccaaacagggcctcgagcgccatatccacatc
cacgccactgtgaaccagcaaacgcacgccttcaaatgccgctattgtggaaagtcgttc
ggctcgcaggttggacgaaggcggcacgagcgccgacatgagaacgtgtcaaagaagagg
cccggctctctggccggcaccgccaccctgctcagtcccagagcccaggtcgacggtccg
agtcctgaccgcgtcacagcttcgggccaccacgtggtcgcgcggtctccgtttcaaatc
ccagccgcgcctttgccgacctctgagatggttaggaaggattccgtagagggagaccgg
cccttcatcgtggacgagaacggcgaatcgaaagagcttcatccctgtaagtactgtaac
aaagccttcggcacgcacaccaacatgcgcaggcaccagcgcaggatccacgagcgccac
ttactgcccaagggcgtccgcaggaaaggcatgctcctgcaggagagccccaccccgccc
cagcagcctgatgagtcccccagcaccagcccgccgctcgtctacgtccccagtgccgac
accgaggacgaggcggaccgggacgactacgtcgtcgacatatccaaaaatatctcggag
aacctcagcctgtacatcgacggtaagatcctgtccaccagctcagtcagcagctgtgac
gtgatcgaggtggactccagttccgccgcgttgttcggtctggacacggtgatcctcagc
cccagtgacatctgtcaggcccttaaagtggacaccaggactggctcggttcgccaggtc
tccaacctcattggccagtccacctcgaaacggaggacgtccacaccccctctcatgccc
ggtatgaaaatggagaccgatactgggaactcctccgcctcctcttcctgttccacctct
tcctcttccaccctgttgatgggaggtctgttccagaaggagaaaaccatctacctgtcc
cctaagctcaaacaactcctccagacccaggacagccataaacccaccatcacactgata
acagacagccacactgccccggtatcggtcacatcctcgtccggaggctcggggaggttc
aagaggagaacggcctcccctccctcgtctcctcacctcagccccgctctcaaaggcgag
agtgcgaagagcgaggcgggatctgggtctgggagctcctacaccctcaaggtgccaaag
ctggaaaacctcaacctgtccactgcctggagtctcaccagcaaagatgacagggatacc
atgaacccctcagggaaggacaaccgtggctggcctgcatcgagcagtagtggggggaac
tcatgtaatcagcagcctctagacttgtccagctctgtcggaaggaaaaatgagggctct
aacaaggcatcgggggaatcggtgctggatctgagcatgcaccgcaagagtggagccgca
gaactggaatcaaagggcatcccagcggcagttcagcctccggccaagaaaaagaagccc
aacaccagcatgctggagaaggttctgatgagtgagtatgccgggctaacaacctctgca
gacgatggctccttaaacctgggaagcccagattcacagtacactgctggtagtggcacg
ggcacctgttctcatagtacctcacccaacatggtgtctgactcggcccacccctctcct
ccatccttaactccagtcaccatgaacccctcctcgcccagcaccagcctggcatgtccc
acaccacctcccccggtcctgcccaccatcccctcaccaccaggcatgcccagctcccct
cactcccagccctccgactgttccacactcagatctcttccggtcctgtcgcccaaaatg
tcccccacgtccgtcgaccatggggacgaagagccggcatctaagcctgtgtccgacaca
gaggagacatcgttaggggaagatcactgcgaggacgagctcatggcccagtcacccgac
cccacccccgacccagtcagagatctccgcaagggtcagtccaagcccagtcctcctcga
gaggccatctctctggacctgtccacgacagagcccggggtggccaggaggactcgaaac
ggcagcagtttgctgaatggaaaagtcagtaaaggcacggcatcagagagtaaatcccag
cactctgacctttctgtgttgtcagagtccctgtctggcccctcagcctctccccctgct
ctgtcagaccgcccatctccccccgtgatcaagaaggagccccgccacgcggacacggcc
cacggcgccctgcctccggtcggcaaaccgacggaggccgaggagcaggaggacggcggc
ggcgacgccttcagcaagagcttcgtctgcaacgtgtgcgacgggcctttccgctccatc
aaggagctgagtcggcacatcgtggcgcacgccgccgactggccgtacaagtgtgagttc
tgcgtccagctgttcggcgacgcggccgccctgctggagcaccgcacggccctgcacggc
gtgggccgcatcttcgtctgctcggcctgccgcaaggagttcgccttcctctgcaacctc
cagcagcaccagaccgacctgcaccccaaccaggagtgcacgcacgcggccgtggagagc
ggcaagctgaggccccagaactacacggaccccagcaaggccacggaggagagctccgcg
gacgcgccgaagccagagtccccggaacaagcccagtcccaggggatggacgtcatggcg
gaggaagagcccagcgtgaacgggaagcacggggacgagggtggcgacgacccgaccgag
gagctctacaccaccatcaagatcatggcctcggaggggggcaagcccaaaggccccgac
gtacgtctgggcatcaatcagcactatcccagcttcaagcctccgcccttcccctaccac
aaccgcacgcacgccacctctgtggcctcggccaccaacttcaccactcacaacatcccc
cagaccttcagcacggccatccgctgcaccaagtgcggcaacagcttcgacaacatgccc
gagctgcacaagcacatcctggcctgtgccaacgccagcgacaagaggcgttacactccc
aagaagaaccccatccccctccggcagatcgtcaagcctcagaacggagtcctgtcgcca
gccgccaccgccgcggtcgccggcagcgttgggcagaatgccttccgcaggatggggcag
cccaagaggctgaacttcaaccaggaggccacgggcaagaccaggatgacttcccttagc
aagaagaagaaccagctggtccaaaaggccatcactcagaggaacaaatccgccgcctcg
gtcaggaagaccttcgtcaaagtggaggaggaggaggaggaggcacagccggcaccaccg
cagcaggaagttcacgtctgccctcactgcagccgggagtttacttaccctgccagcctt
agcaagcacatagcagtcagctgccccatgaagcctgctgccaaaaagggcaagaggggg
gcagcggaggacaagagagccggggccgacgcagcatcggacaaaaacatgagccttcgt
aggagagccacagacgctgagctccagcagcccgagcccgggtccaaacccctgaggaag
acccgggctcgcagctcgggggccccggaggccgagcccccccaggccaccaaagggaaa
gccgcagggcgtcccaagaggccagcctctttcccagctgcagtggttccgcccaggaag
aagggtagaaagggccaagccccgttcttgcctcccaccccatcctcctctgatgttccc
accagtgaacctgcgccacgtccggctgggaggatggggcgagtgggcaaggaggtggca
cccaagaaggtatctgaagtgaagtctctccaggagcagtcccagacccaggttaaaaaa
gaggtccagggagagcgcttctccctgagggcacgggagcgggcaggcgggccagtcacc
aggagccttcagttggccagcttcgcaggtcctgtggaggtgaagacagaagagcagtcc
agccaggagcccaaagaccctaaggagtctctgcagaaatga
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integrated database retrieval system
