KEGG   Osmerus eperlanus (European smelt): 134010073
Entry
134010073         CDS       T10927                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep04510  Focal adhesion
oep04512  ECM-receptor interaction
oep04820  Cytoskeleton in muscle cells
Brite
Exosome [BR:oep04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   134010073 (col4a5)
Glycosaminoglycan binding proteins [BR:oep00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   134010073 (col4a5)
SSDB
Other DBs
NCBI-GeneID: 134010073
NCBI-ProteinID: XP_062305922
LinkDB
Position
23:complement(982958..1007871)
AA seq 1676 aa
METGRTENGFHSDQMWVKGAVSACHGCAAGSKCDCSGVKGGKGERGYPGLQGQPGVPGFP
GPEGPGGPRGEKGYDGPGGPTGPKGIRGPPGLPGFPGTPGIPGLPGQDGAPGPRGTAGCN
GTKGERGFPGTSGYPGTEGRPGPPGLPGQKGDPGDVISSDRFGQKGSLGLPGLPGVPGNP
GPPGLSGPLGPPGPRGNDGRHGPPGPQGPKGNMGLNFQGPKGEKGETGLRGPPGPPGQVG
EQTGPTESEIQRGDKGDIGLPGPTGDVGPPGPPGPSGGQKGEKGEQGEAGKRGKPGKDGD
PGPSGFPGSKGELGGPGLPGRDGDRGDKGDRGFPGPPGVVLGGDTSGRVGPKGEPGFPGS
PGRKGDRGPPGLSGPSGQPGQPGVGSAGQPGQPGFPGDRGPKGEEGQPGIALPGPPGRSG
SPGLQGSPGAPGPPGISSGGGACIGGAPGRPGVQGDRGFQGESGHKGDKGDTCVNCFSNG
SPIPGPQGPAGPPGFPGTPGGPGPKGERGYSGGPGLLGPAGPPGQQGTPGYPGEKGDPGD
AIVADGVRGDKGDTGFPGSPGLPGLDGRPGRDGVPGAPGLKGASGSQQVKGERGPQGEPG
LPGGPGDRGSSGNPGYGPQGPSGEKGVQGVSGRPGTTGTPGAKGEPGQTVAEKGLPGPSG
QNGDPGLPGGPGNPGQPGQPGFPGLPGAKGDPGLSGIGLPGPPGAKGFPGTPGQPGSTGG
PGRPGVDGLPGQPGFPGSKGEPGFGSPGPQGPPGFPGGKGSSGPKGDSGFPGSPGQPGRS
GFDGGPGSKGDSGIPGAPGARGPPGSPSFGSQGLPGAAGPPGPSGSPGFPGGPGAKGDPG
SPGLDIPGLPGDRGSPGFPGSPGSVGAPGGPGGPGRDGLPGLPGAKGDMGVMGSPGPSGG
PGGPGAPGFPGPKGDDGFPGRPGGPGGPGGKGDKGDAGLPGAPGPASPPSLGSKGSKGEP
GAPGFSGLPGQKGISGLPGEPGLPGQDGRPGSSGPSGLKGDAGIPGGPGSPGVPGLKGAM
GEMGFPGPSGLKGAPGQPGRSGSPGGPGAPGFPGAKGDPGLAGAGFPGASGLKGEPGQPG
YPGTTGQKGNPGGPGLPGLPGGPGSKGDPGLPGFQGSPGISGPKGLDGAPGNPGLSGASG
RPGEPGRPGSPGYPGDKGQAGRDGIPGPAGIKGDPGLPGFGGPGSPGLPGIPGAKGDVGL
PGLPGSSGFPGSKGDAGFPGLPGSSGSIGPPGPPGLALQGPKGNPGSPGAPGRGGPPGPE
GPRGPAGSGGIKGEKGIPGASGQPGFPGQKGDMGSPGFSGASGIPGPSGLKGDVGLPGVP
GFPGPKGESGTPGSYGGPGERGDAGEPGLPGDSGVAPAPIVLKGERGPPGIQGQPGERGV
PGGPGREGLNGQPGNPGDLGPEGPPGFSGGPGRKGDPGPAGQPGQRGYPGPRGSDGLQGP
PGSPGGASIAHGFLITRHSQAQDVPFCPDGTSLIYDGYSLLYVQGNERAHGQDLGTAGSC
LRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPQPMPMSMAPITGEGIKPFISRCAVCEA
PAMVIAVHSQTIQIPSCPASWEPLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPF
IECHGRGTCNYFGNSYSFWLATVDSTDMFRKPQSETLKAGNLRTRVSRCVVCMKRT
NT seq 5031 nt   +upstreamnt  +downstreamnt
atggagacaggcaggacggagaatggtttccatagtgaccagatgtgggtcaaaggtgct
gtttcagcatgtcatggctgtgcggctgggtccaagtgtgactgcagcggagtgaaagga
ggaaagggcgagaggggttacccaggcctccagggccagccaggtgtacccgggttccca
gggcccgaggggcccggtggccccagaggagagaagggttatgatggaccaggaggtcca
actggtccaaaaggaatcagaggaccacctggtctacctggattcccaggaacaccagga
attccaggcctcccaggacaagacggggctcctgggccgaggggtaccgcaggctgtaac
ggcaccaagggtgagcgaggattcccaggaacatcaggctaccctggaacagaaggccga
ccaggtcctcccggtttgccaggccaaaagggtgacccaggtgacgtgatttcatcagac
cgtttcggccagaaaggatcgctgggcctccctggcttgcccggagtccctggcaacccc
ggtccccctggattgagcggccctctcggtccacctggtcccagaggaaatgatggtcgc
cacggccctcctggcccacaaggacctaagggaaacatgggcctgaacttccagggaccc
aaaggagagaagggggagactggactgaggggtcctcccgggcctccaggtcaggttggg
gagcagactggacctaccgagtcagagatccagagaggagacaagggtgacatcgggttg
ccgggccctactggtgacgttgggcctccaggaccccctggcccctcaggtgggcagaag
ggagagaagggggagcaaggagaagctggaaaacgaggcaaaccaggaaaagatggagac
cccggtccatctgggttcccaggtagtaaaggagaattaggaggtccaggtctcccgggt
cgtgatggagacagaggtgacaaaggagatcgtggatttccgggacctccaggggtggtg
ttgggtggagatacgtctggtcgagtgggacctaaaggggagcctggattccccgggtcg
ccgggcaggaaaggagacagaggccctcctggtctctcaggtccttccggacaaccagga
cagccaggtgtaggatctgcaggccagcccggccagccagggttcccaggagacagaggt
ccaaagggagaggagggccagcctggcatcgccctccctggccccccaggacggagtggc
tcccctgggctgcagggttctccgggggcacccggacctccagggatctccagcggtggg
ggggcctgcattgggggggcccccggccggcctggtgtgcagggagacaggggcttccag
ggggaaagtggacataaaggtgataagggtgacacctgtgtgaactgcttctccaacggc
agccccatccccggcccccaggggcccgccggcccccccgggttcccaggaacccctgga
ggaccgggacctaaaggtgaaagaggatactcaggaggcccagggcttctcggacctgct
ggtcctccaggccagcaggggacgccaggttacccaggagagaagggagaccctggggac
gccatcgtggctgacggagtgagaggtgacaaaggtgacacgggcttccctggatctccc
ggtttaccgggtctggacggccgccccggtagagacggggtaccgggagcaccgggactc
aaaggagcgtccggttcccagcaggtgaagggagaacgaggaccacaaggggaacccggt
ctcccgggaggtccaggcgacagagggtcttcagggaacccaggctacggcccccagggc
ccctcgggagagaagggcgtgcagggcgtgtcaggccgtccagggactaccggaacacca
ggagctaaaggcgagccgggccagacagtggcggagaagggcttaccaggaccttctgga
cagaacggagatcccggtttaccaggcggcccaggtaaccctggacagcccggacagcct
ggtttccctgggttaccaggagccaaaggagacccaggtctctctggcattggattacca
ggaccccccggtgctaaaggtttcccaggcacacctggccagccgggcagcacaggaggg
cccggcagacctggggtagacggccttcctggacagcctggctttcctggatccaaggga
gagcctggctttggttcacccggaccccaaggccctcctgggttcccagggggtaaagga
tcctccgggcccaaaggagattccggtttccccggcagcccaggacaacctggacggtct
gggttcgacggcggacccggatccaaaggtgactctggtatccctggagcccccggagct
cgtggcccccctggttccccctcgttcggctcccagggcctccccggggccgcgggcccc
cccggccctagtgggtcccccgggttccccggtgggccaggagcgaagggagacccaggc
tcccctggcctggacatcccagggttgccgggagacagaggttctcctgggttccccggt
tcccccggctcggtgggtgctccgggaggacctggaggaccagggcgtgacggcctacct
ggactgcccggtgccaagggagacatgggtgtgatgggctcccctggaccctctggaggg
cccggaggacctggtgcacctggcttccctggacctaaaggtgatgacggtttcccaggg
cgaccaggtgggcccggaggccccggcgggaagggagacaagggggacgccggccttcca
ggtgcccccgggcccgcatccccccccagcctgggttctaagggttctaagggagaacca
ggagctccaggtttcagtgggctgccaggccaaaagggcatctctggtctccctggtgaa
ccaggtctccccgggcaagacggacgtccaggtagttcaggaccatcaggtcttaaagga
gacgcgggtatccccgggggccctggctctcctggagtcccagggttgaagggggccatg
ggggagatgggcttccctggcccctctggtttgaagggagctcctggtcagcccggccgc
tcagggtccccgggggggcctggagcccctgggttccctggggccaagggagaccccgga
ctggccggagcagggttccctggagcatccggattgaagggtgaaccaggccaaccagga
tatccaggaactaccggacagaaaggaaatccaggcggtcccggcctcccaggcctgcca
ggcggtcccggctccaagggcgacccaggcctgccaggattccaaggttctcctggtatt
agcggtccaaaaggtctggacggtgcccccggtaaccccggtctcagcggagcatccggc
cgaccgggagagccaggccgtcctggttcacctggttaccccggcgacaagggccaagca
ggtcgggacgggatccccggtccagctggaatcaaaggagacccaggtctgccaggcttc
ggtggtcctggatcacccggtctcccagggataccaggagcgaagggagacgtgggccta
cctggtctcccaggcagctcgggcttccccggttccaaaggagatgcagggttccccggc
ctccccggttcctctggcagtattgggcccccgggtcccccagggctggccctccagggg
cccaaagggaacccaggctcccctggcgccccagggcgtggaggtcccccaggtccagag
gggccccgcgggcctgctggtagcggagggatcaagggggagaagggcatccctggtgcc
tccggacagcccggtttcccgggacagaagggagatatgggaagccccgggttctcgggt
gcttctggtattcctggtcccagcggtctgaagggagatgttggtcttcctggcgtcccc
ggattcccagggccgaagggggagtctggtacccccggatcgtacggtggccctggagag
cgcggagacgccggagagcctggtctgccaggagactcgggcgtcgcccccgcccccatc
gtgttgaagggggagcggggccccccgggcatccagggccagcctggagagagaggtgtc
cctggaggccccggacgggagggacttaatggccagccaggtaacccaggagacttgggc
cccgagggtcccccaggattcagtggaggccccggacgcaagggtgaccccgggccggcc
ggacagccaggtcagcgagggtaccccggcccccggggttcagacggcctccaggggccc
ccaggctcccccggtggggcttccatcgcccacggcttcctgatcacccgccacagccag
gcccaggacgtgcccttctgcccggacggcacctcgctgatctacgacggctactccctc
ctctacgtccaggggaacgagagagcccacggccaggatctgggcactgctggcagctgt
ctgcgcaggttcagcaccatgcccttcatgttctgcaacatcaacaacgtgtgcaatttc
gcctcccgcaacgactactcctattggctgtccactcctcagcccatgccaatgagcatg
gcccccatcacaggagagggtatcaagcccttcatcagcaggtgtgcagtgtgtgaggct
cctgccatggtgatcgcggtgcacagccagaccatccagatcccctcctgcccagccagc
tgggagcccctgtggataggatactccttcatgatgcacaccagtgcgggtgcggagggt
tccggccaggccctggcctccccgggctcctgcctggaggagttccgcagcgcccccttc
atcgagtgccacggcaggggaacctgcaactactttggcaactcctacagcttctggctc
gccaccgtggactccactgacatgttcaggaagccccagtctgagaccctgaaggccggt
aacctgcgtacgcgtgtcagtcgctgcgtcgtgtgcatgaagaggacgtaa

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