Osmerus eperlanus (European smelt): 134011035
Help
Entry
134011035 CDS
T10927
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04010
MAPK signaling pathway
oep04020
Calcium signaling pathway
oep04144
Endocytosis
oep04510
Focal adhesion
oep04540
Gap junction
oep04810
Regulation of actin cytoskeleton
Brite
Enzymes [BR:
oep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
134011035 (pdgfra)
Protein kinases [BR:
oep01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
134011035 (pdgfra)
CD molecules [BR:
oep04090
]
Proteins
134011035 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134011035
NCBI-ProteinID:
XP_062306427
LinkDB
All DBs
Position
24:complement(5680744..5698680)
Genome browser
AA seq
1471 aa
AA seq
DB search
MAGMKTLLVVGVVLFGFISVTYGILSPTIASNKEEFVLERHSVFNVSCIGKRSVVWVEPL
PDNTFVNPGYNTSTLFINNASVANTGYYSCRYRTLDDQDENNEQDYEAEIYIYVPDPAAP
FVPEEPENLMVPAIVGETFIPCRVSDPASQVTLRSVPGEEEVLAPYDSRMGFVGSMPAGL
YQCETVVDGVIVHSDTYRVEDSTGEEAFQVEVGASEEAVRLGQAVNITCLAPPGPAFQQQ
WLHPKKQAVRAVAMKEILTNQVLYILRIPEATSQDSGVYECVVVNDDSGEIRTGRVVVTV
FEENSFISLEHAGIGAVEFASLLVESEFTILIHASPAPQVTWYKDGSELAGSSYVLTKTT
PLQVSPLQATPLQGHRYQSVLTLRQPLEADSGNYTIMALAGSQSQHFSFTLKVKASGSVA
FQPSSAPLLLPRVEQMQVPLNAPFTLTCHGEAELEWDTPLYLPQQTEEDNSGLFVTTVTV
EDATAMHTGAYTCFYHHGNGSEETQSSIYVYVPDPEVPFLPSLVPYSNHVLTDQKEMEIG
CRVSDPGTNVTLVNADTQQEVPSSYDSRRGAVGLFNPGTYACRAVINDEEHYSEEYIVHG
WVEGAGGLEVELRAPRKALLVGETLTVSCLARGSSEILEDQWKYPGRQTNRGVKSVRENK
REQEIQYTLTIGQASAKDSGSYACTITDIISDKTQTMELVINVYESAFVSLRPSFSPRET
AELDEVREFRADIESFPDARVTWLKDGRPLDDVAAEISSSLRKVGDTRYQSTLTLIRAKQ
EDSGNYTLRLDNGNLSTTHSFSLQVKVPAVIVDLMDLHHGSSLGQAVVCIAGGQPTPELE
WFICSNIKHCANDSSQWVPLPANSTEITVETHLDADLQLESQVMFGRLDNTLAVRCLARN
EMAVVSREVKLVSNGPHSELTVAAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESV
SPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSHSQPVMKVA
VKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKTGPIYIITEYCFYGDLVNY
LHKNRESFLSVHPEKSKKDLDIFGINPVDESNRSYVVLSFEGRGDYMDMKQVDTQYVPML
EINDPSKYSDIQLSSYDSPPSPRQREGEVDSLLPDDNSKGLSTTDLLSFSYQVARGMEFL
ASKNCVHRDLAARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFD
NMYTSLSDVWSYGILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMAKPEHAAAHVYEMM
MKCWNSEPEKRPSFLSLSESVASLLPASYKRSYERINHDFLKSDHPAVTRVCVESDDAYV
GISYKNQGKLKSREEQEQRLSSDSGYIIPLPDLEPDLGYSKRNRHSSQTSDESAIETGSS
STLARREGETLEDITLLEELHSGDLEEDSFL
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcatgaagacccttctcgtggtgggggtagtgctgtttgggttcatatcagtt
acatacggaatactttcgccgaccatcgcatccaacaaagaagagttcgtcctcgagcgg
cattccgtttttaacgttagctgtatcgggaagaggagcgtagtgtgggttgaacccttg
ccggacaacacatttgtgaatcccggatataacacatccacgctcttcataaacaacgcc
tccgttgccaacaccggatactactcctgtagataccggaccttagatgaccaagatgaa
aacaacgagcaggattacgaggcagagatatacatctatgttccagatcctgctgctccc
ttcgtcccggaggagccggaaaacttgatggtgccggcgattgtgggtgagacgttcatc
ccgtgccgcgtgtccgacccggcctcccaggtcacgctgcggagcgtgcccggtgaggag
gaagtgcttgccccgtacgacagcaggatggggtttgtgggcagcatgccggcaggactg
taccagtgtgagaccgtggtcgacggggtcattgtccacagtgacacctacagggtggag
gacagcacaggcgaggaggccttccaggtggaggtgggggccagcgaggaggctgtgagg
ctgggacaggccgtcaacatcacctgccttgcccctccgggaccagccttccagcagcag
tggctccaccccaagaaacaggctgtcagagcagtggcgatgaaggagattctgaccaat
caggtgctctacatcctccgtatcccagaagccacctctcaggacagtggagtctacgag
tgcgtcgttgtcaatgacgacagcggggagatccgcacaggcagagttgtggtcaccgtc
ttcgaggagaactcgttcatctccctggagcatgctgggataggagcggtggagttcgcc
agcctgctggtggagtcagagttcaccatcctgatccacgccagccccgccccccaggtc
acatggtacaaggatggcagcgagctggcgggaagcagctacgtcctgaccaagaccacg
cccctccaggtctcgcccctccaggccacgcccctacagggccacaggtatcagagtgta
ttgacgctgaggcagcccctagaggctgacagtgggaactacaccatcatggccctggct
ggctcccagtcacaacacttctccttcacgctgaaggtcaaagcgtcgggctccgtggcg
ttccagccctcctccgcccccctcctcctgccccgggtggagcagatgcaggtccccctc
aacgcccccttcaccctcacctgccacggggaggcggagctggaatgggacacgcccctc
tacctgccccagcagacggaggaggacaacagcggcctgttcgtcaccacggtgaccgtg
gaggacgcaacggccatgcacacgggcgcctacacctgtttctatcaccacggcaacggc
tcggaggagacgcagagcagcatctatgtctacgtgccggaccccgaggttcccttcctg
ccctcgctggtgccctacagcaaccacgtcctgacggaccagaaggagatggagatcggc
tgccgcgtgtccgaccccggcaccaacgtcaccctggtgaacgccgacacccagcaggag
gtcccctcctcctacgacagccggcgcggcgccgtgggcctgttcaacccgggaacctac
gcctgccgggcagtgatcaatgacgaggagcactacagcgaggagtacattgttcacggg
tgggtggagggcgccggggggctggaggtggagctccgggcccccaggaaggccctgctg
gtgggggagaccctcaccgtgtcctgcctggcgcggggatcctccgagatcctggaggac
caatggaagtaccccggcagacagacgaaccgcggcgtgaagtcagtgcgggagaacaag
cgcgagcaggagatccagtacacgctgaccatcggccaggcgtctgccaaggacagcggc
tcctacgcctgcactatcaccgacatcatcagcgacaagacgcagaccatggagctggtc
atcaacgtctacgagagcgcctttgtgtctctccgcccctccttcagcccgcgggagact
gcggagctcgacgaagtgagggagttccgggcggacatcgagtccttccccgacgcgagg
gtcacctggctgaaagatggccgccctctggacgacgtggcggcagagatcagcagcagc
ctgcggaaggtcggcgataccaggtaccagagtactctgaccctgatccgggccaagcag
gaggatagtgggaactacactctgcgactggacaacggcaacctgagcaccacccacagt
ttcagcttgcaggtcaaagttcctgctgtgatcgtggatctcatggacctgcatcacggc
tcctcgctcggtcaggccgtggtgtgcatcgctgggggacagcccacacctgagctggag
tggttcatctgcagcaacatcaaacactgtgccaacgactcctcccagtgggtgcccctc
ccggccaactccacggagatcaccgtggaaacgcacctggacgccgacctccagctggag
agccaggtgatgttcggtcgtcttgacaacacactggccgtgcgctgcctggccaggaac
gagatggccgtcgtcagcagggaggtcaagctggtgtctaatggccctcactcagagctg
acggtggctgcagcagtgttggtgttgctggtcatagtcatcatctctctcattgtgctc
gtcatcatatggaaacagaagcctcgatatgaaatccgctggagggtgatcgagtctgtg
agtccagacggccatgagtacatctacgtggaccccatgcagctgccctacgactcccgt
tgggagttccccagagacggcctggtgctaggccgcatcctgggctccggggccttcggg
aaggtggtggaagggacagcctacggactcagccactcccagccggtcatgaaggtggct
gtgaagatgctgaaacccactgcgcgctccagtgaaaagcaggccctgatgtcggagctg
aagatcatgactcacctgggccctcacctgaacatcgtcaacctgctgggggcttgcacc
aagacaggtcccatctacatcatcactgagtactgtttctatggcgacctggtgaactac
cttcataagaacagggagagcttcctaagtgtccatccggagaaatccaagaaggacctg
gacatcttcggcatcaaccctgtggacgagagcaacaggagctatgtggtcctgtccttc
gagggcagaggagactacatggacatgaaacaggtggacacgcagtacgttcccatgctg
gagatcaacgatccctccaaatactccgacattcagctctccagctacgacagcccgccc
tcgccgagacagagagagggcgaggtggacagtctgctgccggacgataacagcaagggt
ctgagcaccaccgacctgctcagcttctcctaccaggtggcccgcggcatggagttcctg
gcctccaagaactgtgtgcacagagacctggctgccaggaacgtgctgctgtcccagggg
aagatagtgaagatctgtgactttggtctggccagggacatcatgcatgacaacaactat
gtctccaagggcagcacgttcctgccagtgaagtggatggctcctgagagcatctttgac
aacatgtacaccagcctgagtgacgtctggtcctatggcatcctgctttgggagatcttc
tctctgggtggaaccccctaccctggtatggtggtggactccagcttctacaacaagatc
aagagtggctacaggatggccaagcctgagcatgctgctgcccacgtgtatgagatgatg
atgaagtgttggaacagcgagccagagaaaaggccctccttcctcagcctcagcgaatca
gtggcctccctgctgcccgccagctacaagaggagctacgagaggatcaaccatgatttc
ctgaagagtgaccaccctgcggtgacgcgcgtgtgcgtggagagcgacgacgcctacgtg
ggcatcagctacaagaaccagggcaagctgaagagccgggaggagcaggagcagcgtctg
agctcggacagcggctacatcatccccctgcccgacctggagcctgacctgggctacagc
aagaggaaccgccacagctcccagacgtcggacgagagtgccatagagactggtagcagc
tccacgctggcccgcagggagggcgagaccctggaggacatcaccctgctggaggagctc
cactctggggacctggaggaggacagcttcctgtga
DBGET
integrated database retrieval system
