Osmerus eperlanus (European smelt): 134011063
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Entry
134011063 CDS
T10927
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03018
RNA degradation
oep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134011063 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
134011063 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134011063 (lsm4)
03041 Spliceosome [BR:
oep03041
]
134011063 (lsm4)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134011063 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
134011063 (lsm4)
Spliceosome [BR:
oep03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
134011063 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
134011063
NCBI-ProteinID:
XP_062306483
LinkDB
All DBs
Position
24:complement(4130029..4132111)
Genome browser
AA seq
144 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQNKQQGKGRGGGAGRGLFGGRGRGMP
GVGRGQQQPDNKKPGKPQGVKNQH
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgctacctctttctttgctgaagactgcgcagaaccaccctatgctggtggaactgaag
aatggagagacgtacaacggacatttggtcagttgcgacaactggatgaacatcaacttg
agagaagtaatctgcacctcaagggatggagataagttttggaggatgcctgagtgctat
atcagagggagcaccatcaagtatctgcgtatccccgatgagatcatcgacatggtgaag
gaggaggtggtgtccaagggccgtgggcgaggcggcatgcagcagaacaaacagcagggc
aagggtcgtggcggtggagccggcagaggattgtttggcggccgtggcagaggtatgcca
ggggtgggcagaggacagcagcaaccagacaacaaaaaacctggtaaacctcagggtgtt
aagaaccagcactga
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