Osmerus eperlanus (European smelt): 134011075
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Entry
134011075 CDS
T10927
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent R-type calcium channel subunit alpha-1E-like
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04010
MAPK signaling pathway
oep04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134011075
04020 Calcium signaling pathway
134011075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134011075
Ion channels [BR:
oep04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
134011075
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
134011075
NCBI-ProteinID:
XP_062306498
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All DBs
Position
24:complement(1740121..1765925)
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AA seq
1886 aa
AA seq
DB search
MVKTHTFYWTVLGLVALNTMCVAIVHHNQPLWLSTFLYYAEFLFLALFLTEMFLKMYSLG
ARLYFHSSFNCFDCSVIVGSIFEVLWGFFRPGTSFGISVLRALRLLRIFKITKYWASLRN
LVVSLMNSMKSIISLIFLLFLFIVVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQ
ILTGEDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQEL
TKDQEEEEAAFNQKHALQKAKEVGPMSSMMSSEGSRRRRPYLYRKRAIHRSRPAYSLEEP
PVGLLDGVALPPLNPSNSFMSRRERRRRMTMSVWEQRTSQLRRHRQMSSREILYTCPSEE
QDAPPSDATDATGQPLPVALPLQRTASRTPTGSLRGQADAPSAKTGAPQQDPPMPMDMPL
EPSLSAGILDAPILALVPEPPGTVDLPPPEPPVALPGPPDSDPLPEALPSHLHPLSGRLN
GERRQRAVRKFRPPPNGDSLTPDAGGRGRGRRTRRRGNDPQAEVRGESSSPGEESRSLSR
SRSRERRRSPEEDEKERRRSPEEEEKERRREIESEAGQCGGTREERGQGGRTQPGEPNRE
EPLRSDPPTLQLTPPPAGEIPEGCPGDVVVATAGENQDKPLPLSSSVVIEVPNTQPCLEL
TTIKGPFKDAEASEPEKEDEERADPEIPVTPDSMFIFKPGNPVRRVCHYVVNLRYFEMCI
LLVIAASSIALAAEDPVATSSDWNKVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFR
DLWNVLDFVVVIGALVAFALTXVMWNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVF
DCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDGSMDTEKDCQGFYIDYGKD
KKEVKRRDWKRHEFHYDNVVWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRGNRMEM
SIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPXPSP
LHAPERHTFQYRLWHFVVSSSFEYTVLAMIALNTVVLMMKYYSAPPAYEAVLKHLNTAFT
VLFSVECVLKIMAFGFLNYFRDTWNIFDFITVLGSITEIVVDLQSIDTINMSFLKLFRAA
RLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNEETHIN
QHNNFKTFFGALMLLFRSATGESWQEIMLSCLGGQRCERDSSIAVLTSDLEGAVCGTDFA
YFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDKAACGRI
HYNDMYEMLSNMSPPLGLGRKCPSKLAYKRLVLMNMPVDEEMSVHFTSTLMALIRTALEV
KIARGGEDRGQMDIDLQKEISVIWPHLSQKNLDLLVPIHKASDMTIGKIYAAMMIMDYYK
QSKAKKLRQQLEEQKHAPMFQRMDASSLPMDILCSAKAMPFLTHSASSALTRGGFVALSP
VSPQEEFLQPPCHPHHALEQEDYHLHGNYHHHHPHTHHHHPHTLVPEVKQYSRVQPQSSR
QDSGPGGPGGPGGPGGRTASIRASSMPRLDPQAGSDSKMMKRSFSTIGDQCVNGLWLEEH
SLQRVSPDNTYRPRQKNYRGARANHREPGMERGRSKERRHLLSPDVSRCNSEERSQDQSE
ERRPSHSPSEGGTRPVHRQANASGSPAHSSSESGTPRGRRQLPQTPSRPRPHISYSPLLC
RAPPSPPAPLQEPLGGGPVEPAWTGEDGGGPMASPAPGPAVAVMGLGLGQGSGVAHSSPL
RYISEPYLALHEDFPGEAAAAAALQDTLTFEAAMATSLGRANAISSAPQLRHTWQVPNGH
FRKRLGQAGSVAACELHSDTDEDDRC
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagacccacaccttctactggactgtgctgggcctggtggccctcaacaccatg
tgtgtggctatcgtccaccacaaccagcctctctggctgtccaccttcctctactatgct
gagttcctcttcctggctctgttcctgactgagatgttcctgaagatgtacagcctgggg
gccagactctacttccactcctccttcaactgcttcgactgcagtgtgatcgtgggcagc
atcttcgaggtcttgtgggggttcttcagacctggaacctcgtttggcatcagtgtgttg
agggcactgcgtctcctccggatcttcaagatcaccaagtactgggcctcgctacgcaac
ctggtggtgtctctgatgaactccatgaagtccatcatcagcctcatcttcctcctcttc
ctcttcatcgtggtgttcgccttgctcggcatgcagctgtttggcggcaggttcatcttc
gaagactacactcccaccaactttgacaccttcccggccgccatcatgacagtgttccag
atcttgacgggcgaagactggaacgaggtcatgtacaacggcatccgttcccagggaggg
gtgaagtctgggatgtggtcgtccatctacttcatcgtcctcacactgtttggaaactac
acactgctgaatgtcttcttggccatcgccgtcgacaaccttgccaatgcacaggaactg
acaaaggaccaggaggaggaggaagcagcgtttaaccagaagcatgctctccagaaggcc
aaggaagttggccccatgtcctccatgatgtcttcagagggaagccggagaagacggcct
tacctgtacaggaagcgagccatccaccgcagccggccagcctattccctggaggagccc
ccagtgggcctgctggacggggtggccctgccgcccctcaacccctctaactctttcatg
tccaggagggagaggaggaggaggatgaccatgtcagtgtgggagcagcgcaccagtcag
ctgaggcgacaccgtcagatgtccagcagggagatcctctacacctgccccagcgaggaa
caggacgcgcccccctccgacgccaccgatgccacgggacagcccctccccgtcgccctc
cccctgcagcgcacggcctctcgcacccccacaggcagcctccgaggacaggccgacgct
ccgtcagctaagaccggcgcgccccagcaggacccgcccatgcccatggacatgccccta
gagccctcgctgtctgcgggcatcctggacgcccccattctggccctggtgccggagcct
ccaggaacggtggacctgcctccgccggagccccccgtggccctcccggggcccccggac
tcggaccccctccccgaggctctccccagtcacctccaccctctcagcgggaggctgaac
ggcgagaggagacagagggccgtgaggaagttccgcccccctcctaacggcgactcgctg
accccggacgcgggcgggaggggcaggggcaggaggacgcgtcgccgcggcaacgacccc
caggccgaggtcaggggtgaatcgtcgtctcccggggaggagagccgctcgctcagtcgc
tccaggagcagggagaggaggaggagtcctgaagaggacgagaaggagaggaggaggagt
cctgaagaggaggagaaggagaggaggagggagatagagagcgaggctggtcagtgtgga
gggaccagggaggagagaggacagggaggccgcacacaacctggggaacccaacagggag
gagcctctccgctcagacccgcccaccttgcagctgactccgccccccgcgggggagatc
ccggaaggctgtccgggggatgtcgtcgtggcaacagcgggggaaaaccaggacaagccc
ctccccctgagttcgagcgttgtcatagaggtgccgaacacccaaccctgtctggagctg
acaacaatcaaaggtccctttaaggatgccgaggcgtccgagccagagaaggaggacgag
gagcgggccgatccagaaatcccggtgaccccagacagcatgttcatcttcaaacctggc
aaccctgtgcggcgggtttgtcattacgtggtgaacctgcgctactttgagatgtgtatc
ctgctggtcatcgctgccagcagcatcgccctggccgcagaggatcctgtggccaccagt
tctgactggaacaaggtcctgcggtatttcgactacgttttcacgggagtcttcaccttc
gagatgataataaagatgatcgaccagggtctgatcctacatgacggctcctacttccga
gacctgtggaacgttctagactttgttgtcgtaatcggagcgctggtggccttcgcccta
acgtgagtcatgtggaacaacaaaggtcgtgacatcaagaccatcaagtctctgagagtg
ctgcgtgtcctcagacccctcaagaccatcaagaggctccccaagctcaaggcggtgttt
gactgcgtggtcacctcgctcaaaaacgtcttcaacatcctcatcgtctacaagctcttc
atgttcatcttcgccgtcatcgccgtgcagctcttcaaggggaagttcttctactgcacc
gacggctccatggacactgagaaggactgccagggtttctacatcgactacgggaaggac
aagaaggaggttaagaggcgggactggaagaggcatgagttccactacgacaacgtggtg
tgggccctgctcaccctgttcaccgtgtccacgggagagggctggccgcaggtcctgcag
cactcggtggacgtgacggaggaggacaggggccccagccgggggaacaggatggagatg
tccatcttctacgtcatctactttgtggtgttccccttcttcttcgtcaacatcttcgtg
gccctcatcatcatcaccttccaggagcagggagacaagatgatggaggagtgcagcctg
gagaagaacgagcgtgcgtgtatagactttgccatcagtgccaagccctgaccctccccg
ctacatgccccagaacggcacaccttccagtaccggctctggcactttgtggtttcgtct
tctttcgagtacactgtactggccatgatcgccctcaacactgtggtcctgatgatgaag
tattactccgcccctccagcgtacgaggcggtgctgaagcacctgaacacggcctttacc
gtgctgttctctgtggagtgtgtcctcaagatcatggcctttggcttcctgaactacttt
cgagacacctggaacatatttgacttcatcactgttttgggcagcattaccgagatagtg
gtggacttgcagtccatcgacacgatcaacatgagcttcctcaagctgttccgggcggct
cgtctcatcaagctgctgaggcagggctacaccatcaggatcctgctgtggaccttcgta
cagtccttcaaggctctgccctacgtgtgtctactgatcgccatgctcttcttcatctac
gccatcatcggcatgcaggtgtttgggaacatcaaactgaacgaggagacccacattaac
cagcacaacaacttcaagactttctttggagctctgatgctcctcttcaggagtgctacg
ggggagtcgtggcaggagatcatgctgtcgtgcctggggggtcagaggtgtgagcgggac
tcctccatcgctgtcctgacctccgacctggagggggcagtctgtgggacggacttcgcc
tacttctactttgtctccttcatcttcttcagctcatttctgatgctgaacctgttcgta
gcggtgatcatggacaactttgagtatctgaccagagattcatccatccttggtccacat
cacctggatgagtttgtcaggatctggggagagtacgacaaggccgcctgtggtcgtata
cattacaatgacatgtatgagatgctgagcaacatgtcgccacctctaggcctgggaagg
aaatgcccctccaaactggcatataagaggctggtgctcatgaacatgcccgtggatgag
gagatgtcggtccatttcacctccaccctcatggctctgatacgaaccgccctggaggtc
aagatcgcccgaggaggggaggaccggggtcagatggacatcgacctgcagaaggagatc
agcgtgatctggccacacctctctcagaagaacctcgacctcctcgtccccatccacaaa
gccagtgacatgaccataggaaagatctatgcagccatgatgatcatggactactacaag
cagagcaaggccaagaaactgaggcagcaactggaggaacagaaacacgcccctatgttc
cagcgaatggacgcctcctccctgcctatggacatcctgtgcagtgccaaagccatgccc
ttcctcacacacagtgccagctcggccctgaccagaggaggcttcgtggccctgagtccc
gtctctcctcaggaggagttcttgcagcccccctgccacccccaccacgctctggagcag
gaggactaccacctccacggcaactaccaccaccaccacccccacacacaccaccaccac
ccgcacacgctggtgcctgaggtgaagcagtacagtcgtgtgcagccccagtccagcagg
caggacagcggccccgggggccccgggggccccgggggccccgggggccggacagcctcc
atcagagcctcctccatgcccaggctggaccctcaggcggggagtgacagtaagatgatg
aagcgatccttctccactattggagatcagtgtgtgaacgggctgtggctggaggagcac
tccctgcagagggtcagccccgacaacacctacagacccaggcagaagaactacaggggt
gcccgagccaatcacagggagccgggcatggagcgcggacgttccaaagaacggcgccac
ctgctgtctcctgacgtgtcgcgctgcaactcagaggagcgcagccaggaccaatcagaa
gagaggaggccgtcccactcgcccagcgaggggggcacgcggccggtccacagacaggcc
aatgcctcgggtagccccgcccattccagttctgagtccggcacccctcgtgggcgtcgc
cagctgccccagacgccttccaggccccgcccccacatctcctactccccactgctctgc
cgagcgccaccctcaccacccgcccccctgcaggagcccctgggggggggccctgtggag
ccagcctggacgggggaggacggagggggccccatggcctcccctgccccgggcccggct
gtggcggtgatggggttagggctgggtcaggggtcaggggtcgcccattcctccccgctc
cgctacatctcggagccgtacctggcgctgcatgaggacttccccggcgaggccgccgcc
gccgccgccctgcaggacacgctcaccttcgaggccgccatggcgaccagcctggggcgg
gccaacgccataagctccgctccccagctcagacacacctggcaggtacccaacggtcac
ttccggaagcgtctggggcaggccggctcggtggcggcctgtgagctgcacagcgacacg
gacgaggatgatcgttgttag
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