Osmerus eperlanus (European smelt): 134011094
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Entry
134011094 CDS
T10927
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oep03009
]
134011094 (ddx49)
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134011094 (ddx49)
Ribosome biogenesis [BR:
oep03009
]
Eukaryotic type
90S particles
Helicases
134011094 (ddx49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
DUF3181
Motif
Other DBs
NCBI-GeneID:
134011094
NCBI-ProteinID:
XP_062306525
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All DBs
Position
24:complement(4150863..4155033)
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AA seq
478 aa
AA seq
DB search
MSEFSSLGLSNWLIQQCTQLGISKPTPVQENCVPPILEGRDVMGCAKTGSGKTAAFVLPV
LQKLSEDPFGIFCLVLTPTRELAYQIAEQFRVFGKPLGLRDCIIVGGMDMITQALELSNK
PHIVVATPGRLADHIRSSNTFSIKKIRFLIMDEADRLLEQGCTDFTKDLEVILGAVPAKR
QTLLFSATLTDTLQELKSIAMNEPFFWESKSETRTVEELDQRYILTPEKVKDAYLVYLIQ
KFQDEHDDWSIMIFTSTCKNCQILTMMLREFNFPTISLHSMMKQKQRFTNLAKFKSSVYK
ILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLV
QSIEEQIQTKLSEYSVEEKDVLKILTQVNVTRRECEIRLESTDFDEKKEINKRKQMILEG
KDPDLEAKRKAELDKIRSEKRKFKERIQETIQQKQQGMLKKKLMKSKHIQKKKSAKST
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagttttcctctctagggctgtcaaattggttgatacaacaatgtacacaattg
gggataagtaaaccaacacccgtccaggagaactgtgtgccaccaattttggaaggtcgg
gatgtgatgggctgtgcaaaaactggcagtggaaagactgctgcgtttgttttaccagtg
ctccagaagttatctgaggatccatttgggatattctgtctcgtgctcacgccaaccaga
gagttggcgtaccagattgctgagcagtttagagtctttggcaaaccgctgggcttgagg
gattgcattattgttggtggaatggacatgatcactcaagccttggagttgtcaaataag
cctcacattgttgtagccacaccaggacgactggcagaccacatacgaagctccaacacc
tttagcatcaagaagatccggtttctgatcatggatgaagcggatcgcctgctagagcag
ggctgcacagacttcaccaaggacctggaggtgatcctgggggctgtgccagccaaacgc
cagactctcctcttcagtgccaccctcacagacacactgcaggagctcaaaagcatcgcc
atgaacgagcccttcttctgggaaagcaaatctgagacgcgcacggtcgaagagttggat
cagagatacatcctaaccccagagaaagtgaaagacgcctatctggtgtacctgatccag
aagttccaagacgagcatgatgattggtccatcatgatcttcaccagcacctgcaagaat
tgtcaaatactcacaatgatgctccgcgagttcaacttccccaccatttccttacattct
atgatgaagcagaaacaacgttttaccaacctagcaaagttcaagtccagtgtctacaaa
atcctcattgcaacagatgtggcagccaggggtctggatattccaacagtccaggtcgtc
atcaaccacaacactccaggtctgccaaaaatctacatccacagagttggaagaacagcc
agagcaggaaggaacggcgtctcgatcactctggtgactcagtacgacatccacctggtc
caatccattgaggagcagattcagactaagctgagtgaatattcagttgaagagaaagat
gtgctgaagatcctcacccaagtcaacgtgacaagacgagagtgtgaaatcagacttgag
tctacagatttcgatgagaagaaggagatcaacaaaaggaaacagatgatcctggaaggg
aaagatccagacttggaggcaaaaagaaaggcggaattggacaagatccgtagtgaaaaa
cggaaatttaaggagcggattcaagaaacaattcagcagaaacaacaaggaatgttgaaa
aagaaactgatgaaaagtaaacatatccaaaagaaaaagtctgcaaagtccacataa
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