Osmerus eperlanus (European smelt): 134011181
Help
Entry
134011181 CDS
T10927
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134011181 (sox2)
Transcription factors [BR:
oep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134011181 (sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134011181
NCBI-ProteinID:
XP_062306661
LinkDB
All DBs
Position
24:3384202..3386401
Genome browser
AA seq
315 aa
AA seq
DB search
MYNMMETELKPPAPQTNTGGTGNTNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNGMGAGVGVGAGLGGGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQH
PGLNAHNTAQMQPMHRYDMSALQYNSMTGSQTYMNGSPTYSMSYSQQTNPGMTLGSMGSV
VKSESSSSPPVVTSSSHSRAGQCQTGDLRDMISMYLPGAEVPEQTAQSRLHMSQHYQNAP
VPGTTINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaacagaacttaaaccccctgcacctcagaccaatactgggggg
actgggaacacgaattcatcgggaaacaaccagaaaaatagcccggaccgcgtcaagaga
ccgatgaatgcctttatggtttggtcgaggggacagcggagaaagatggcacaggagaac
cccaaaatgcacaattcggaaattagcaaaagactcggggccgagtggaaacttctatcc
gagagcgagaagcgacctttcatcgacgaagcgaagcgtctccgggctcttcacatgaag
gagcacccggattacaaataccgaccccgccggaaaaccaagacgttgatgaagaaggac
aagtacactctgccaggtgggctcctcgcgccgggcggtaatggcatgggtgcaggagtg
ggtgtaggggccgggttaggcggaggggtgaaccagcggatggacagttacgctcacatg
aacggctggaccaatggaggttatggcatgatgcaggaacagcttggctacccgcagcac
ccgggcttaaacgcacacaatacggctcagatgcagcccatgcaccgctacgacatgagt
gcgctccagtacaactccatgaccggctcccagacctacatgaacgggtccccaacgtat
agcatgtcctactctcagcagaccaatccaggaatgacgctgggctccatgggctcggtg
gtcaagtcagagtccagctccagtccacccgttgtcacgtcgtcctctcactcccgggct
ggtcagtgtcagacgggggaccttcgggacatgatcagcatgtacttaccgggcgctgag
gtacccgagcaaacggcccaaagcagactccacatgtcccagcattaccagaacgcacct
gtgcccggcacgacgattaacggcacgctccccttatcacacatgtaa
DBGET
integrated database retrieval system
