Osmerus eperlanus (European smelt): 134011312
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Entry
134011312 CDS
T10927
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
oep Osmerus eperlanus (European smelt)
Brite
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134011312 (chd1l)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
SWI2_SNF2
AAA_22
Selenoprotein_S
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
134011312
NCBI-ProteinID:
XP_062306880
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All DBs
Position
24:complement(4996665..5009971)
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AA seq
1002 aa
AA seq
DB search
MTSFTQKIKDSVPDKPMINLGESDLQKWGLQGITLRTYQLDGVRWLVQCLKNQEGCILGD
EMGLGKTCQTISLLVYMSGALGIKGPFLVLSPLSVMDNWRTEMKRFSPGLTVLSYTGDKD
TRAELQRNMDTMDFQVLLTTYELCLKDATFLKKRNWKILVVDEAHRLKNQNSLLHKTLTE
FSVDFRVLLTGTPIQNNLLEVYSLLNFIQPSLFAADEKDNFVDTYAHVQSQPTLASDLQS
ILQPFLLRRVKAEVAADLPRKTELVVYHGMSALQKKYYKALLMKDRDAFGREEAGKTRLL
NILMQLRKCVDHPYLFDGVEPEPFVMGEHLVEASGKLCLLDSMLSYLHEGGHRVLLFSQL
TRMLDIVQDYMEYRGYSYERLDGSVRGEERNLAIKNFSSKDVFVFLLSTRAGGVGMNLTA
ADTVIFMDSDFNPQNDLQAAARCHRIGQTRAVKVIRLLGRDTVEEIVYSRAVSKLRLTNT
VIEEGRFSLLEKAQSAAAGLQLSEVLKFGVDKLLSSEESTVQEVDLSLILGPSRGGEWLS
NDDLPRVEEEDSEPDSQNHMYCFEGRDYSRDPSSEDRRSFEQLLEEQLEGQEEAGGEGRA
LRHKAGGALAGPLGLAPRKRKVLSEAELEARRKRGQEAAAKRAKLLEDRKRNQQEQKQKK
KMAWWDSCGYRSRCLPSVESEEEEEDGSICSTDSEHAAIRYVLGDVTHPHAAGGDAIIVH
CVDDSGRWGRGGLFSALEVRSDEPRKQYELAGKMKDLELGRVLLFPIDDRQSRLDGQDHL
ALAVAQHRDQANKLSGILLPSLEESLRAISLVARRKKASVHLPRIGHSTGGFNWYGTERL
IRKHLSSQGVSTSIYYYSRTASAKATAAAVPGTSTGGALSPARSPGSDGPSAGEEEECEG
GPGGSSLPDFMKGVHVFFYNLAASERKRLARYLLSYDGEEEEVMSSEVTHIVAEVESPIH
SQELRELMQKFPQAIPTRKLWLDTCFSRQRNVDHQQFMHLFS
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcttcactcagaaaataaaagacagtgtgccagataaaccgatgataaatctt
ggcgaaagcgacttgcagaaatggggcttgcaagggattacgctgagaacgtatcagttg
gatggagtgaggtggctcgttcagtgccttaagaatcaagaaggatgcattttaggggac
gaaatgggcctgggcaagacttgtcagaccatctctctgctggtgtacatgagcggagct
ctggggatcaaggggccatttctggtgctcagcccgctctctgtcatggacaactggaga
acagagatgaaacgtttttctccagggctgacggttttgagttacactggagacaaggac
acgagggcagagctacagagaaacatggacaccatggactttcaggttctgctgactacc
tatgagctgtgtctcaaagacgccacgttcttaaagaagcggaattggaagattcttgtg
gtagacgaggcccacaggttgaagaatcagaactcgttgttgcacaaaaccctgactgag
ttttctgtggactttagagtcctgttgactgggacccccatccagaacaacctgctggag
gtctactccctgcttaacttcatccagcccagccttttcgccgcggacgagaaggacaac
tttgttgacacatacgcccatgtacagtcccaacctactcttgccagcgatctccagagc
atcctgcagcccttcctgctgcgcagggtgaaggccgaggtggctgccgacctgcccagg
aagacagagctggtggtgtaccacggcatgtcagccctgcagaagaagtactacaaggcg
ctcctgatgaaggaccgcgatgccttcggacgtgaggaggccggcaagacacgactgctg
aatatcctgatgcagctgaggaagtgcgtggaccacccctacctgtttgacggtgtggag
cctgagccctttgtgatgggggagcatcttgttgaagccagtgggaagctctgtctgctg
gacagcatgctgtcctatctacatgaagggggccatcgtgtgttgctgttctcccagctg
acccggatgctggacatagtgcaggactacatggagtacagaggatacagctatgagcgc
ctggatggctctgtcaggggagaggagaggaacctggctatcaagaacttcagcagcaag
gatgtgtttgtcttcctgctcagcaccagagcagggggagtagggatgaacctgacagct
gcggacacggtcatcttcatggacagcgacttcaacccccagaatgacttgcaggcagct
gcgcgttgtcatcgcattggtcaaaccagggctgtaaaggtgatccgtctcctgggtaga
gacacggtggaggagattgtgtattcccgggccgtctccaagctgcgcctcaccaacacc
gtgatcgaggagggccgcttctccctgctggagaaggcccagtctgctgctgccgggctt
cagttgagtgaagtcctcaagttcggagtagacaagctgctgtcgtccgaggagagtaca
gtccaggaagtagacctaagtttgatcctgggtccgtcgcggggcggggagtggctatcc
aacgatgacctgcccagggtagaagaggaggactccgaacccgacagccagaaccacatg
tactgcttcgaggggagagactactccagggaccccagctctgaggaccggcgcagcttt
gagcagctgctggaggagcagttggaagggcaggaggaggctgggggagaggggcgcgct
ctgcgccacaaagctggaggcgctctggcggggcctctggggctggcgccgaggaagagg
aaggtcctgagcgaggcagagctggaggcgaggaggaagagggggcaggaggctgcggcc
aagagggccaagctactggaggacaggaagaggaaccagcaggagcagaaacagaagaag
aagatggcgtggtgggactcttgcgggtacagatccaggtgcttaccctcggtggagagt
gaggaagaggaggaggacggcagcatctgctccacagattccgaacacgcggccatccgc
tacgtgctgggggacgtgacccatccgcacgctgccggcggggacgccatcatagtacac
tgtgttgatgactccggaaggtggggcaggggcgggctgttctcagcactggaggtacgc
tccgatgagccacgcaaacagtacgagctggcaggaaagatgaaggatctggaacttggg
cgtgtgctgctgttcccgatagatgaccgacagtccagactggatggccaagaccatctg
gcgctggcagtggcacagcacagagatcaggccaacaagctgtctggtatcctgctgccc
tccctcgaggaatccctcagggcaatctctcttgtggcgagaaggaaaaaagcaagcgtt
cacctgccgaggatcggccactccaccggagggtttaactggtatggtacagagaggctg
atcagaaagcacctgtcgtcccagggtgtatccacctccatatactactacagcaggact
gcgtctgctaaggctacggcagcagcagtacccggtacctccacaggaggggcgttgtct
ccggcgcggtccccaggatcggacgggcccagtgcgggggaggaggaggagtgtgagggg
ggccccggaggctccagcctgcctgacttcatgaagggagttcacgtcttcttctacaac
ctggctgcctcggagcggaagaggctggctcgctacctgctgtcgtatgatggcgaggag
gaggaggtcatgagttcagaggtcacacacattgtggccgaggtggaaagtcccatccac
tcacaggagctcagggaactcatgcagaagtttcctcaggcaatccccacacgcaagttg
tggctggacacctgcttctctaggcagaggaacgtggaccatcaacagtttatgcatcta
ttcagttaa
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