Osmerus eperlanus (European smelt): 134011395
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Entry
134011395 CDS
T10927
Symbol
sned1
Name
(RefSeq) LOW QUALITY PROTEIN: sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
oep Osmerus eperlanus (European smelt)
Brite
Domain-containing proteins not elsewhere classified [BR:
oep04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
134011395 (sned1)
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GFIT
Other DBs
NCBI-GeneID:
134011395
NCBI-ProteinID:
XP_062306985
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Position
24:590540..618023
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AA seq
1388 aa
AA seq
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MLGVSPLSPCCLWLLSLLSLGLLPRAEPSVPLEEFYPFGPEQGDAQTPSQDDGGSGLLQI
SEAFPFFGDRHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVLAPFWADVDNRRAGQV
FYRESRVPEVLKRASTHIRMYFSEFPEFSANWVLVATWHQVAFFGGSALVQVNTFQAVLI
TDGDLSFTIFQYHLVSWTTGMHASSGGNLAGLGGIAAQAGFNAGDGRRYFNIPGSRTEDV
VDVEGTTNVGYPGRWVFRIDHAQVEVGGCNDSASVCLRLRPCENGGRCIDDCIPGKPSFT
CSCLAGFTGRRCQIDVDECASYPCQNAGSCEDQVNAFSCRCPRGYTGTLCETDMDECRAG
PCLNGARCLQAVANFTCVCERGYAGALCEIDLDECASQPCVNGGVCADQVDGYTCSCPAR
FTGAHCETELVAVQVNSSSSQAENQTASCGGEGCGPRQTCLYSSPGSYNCTCNPGFYGDK
CEEECLCQNGGLCLDLNGTCECPSGYTGXYCQLEVTQTPCSNSRPCPDGGPCLEYGGTYL
CTCHTGVLELDPNPYPYVQPRSVCESGPCENGGFCYERDGGYSCECKHGYRGKNCEKVRN
ACASAPCRNGASCKEAEGSYLCVCSYRFTGKHCEVGKPDPCVSSPCVNGGTCFHYIGKYK
CECPAGFSGRHCEVRHSAHTAAGPDCGPPPLLKHAEVHFSSSAAGSLAVYTCHPGYSPLP
RATHSICGGQGAWSQPPDCQEVDECVSQPCLNGATCLDRVHSYLCACDKGFTGIHCQTDV
DECLSEPCEHGGTCEDQSGSFLCHCPPGHSGQHCQIEEDGCESAPCLNGGVCRGYRQTPL
CVCKEGFLGDRCQTLENPCVLQPCGNRGLCRSDWRGNYSCACRVGHTGKACEKDLLPPSG
LRMLRVEESEVELLWDQPDPQSLVSAFAVTYAPLEGGARKTDFLDGQQSSHLLQGLAPGL
LYNISTFSVKRNANSNDVSQPAVALIRTRPRRVEQLQAVNVSSSQVWLRWLVQAAHHAAV
SQVRVSLVPPGGSGARTALLNTSTTEYTFSSLLPGQLYSVDVLTQSGVRPDEFPSTSHSA
GPLQVWTRPLPPQNLSLSHVTTNSAHITWDRPPVNLPDGFVVNVTRGLNTRSRFLASGRL
GAYTLRDLSPSQHYHLVLTAVTNTGPGQLHSLPQHLAFTTLPMDDGLGRRARPAGGEGGV
RTLTPSEPQDLEVTGERELTGEMSRYTELKDSRGRITARFSNLPWKVLRHRTKPEPPIKL
ERMEETTNKISLALEIQEEGSRRQPEGSRDCRGVPCQNGGTCVKGSDAFICDCPSGFKGR
QCELYCQRVPHPCTRLYSETKSVPVWEGSVCRYLYKRTYKVQQDVCYREICDPLLPKKSP
NRRTNRQQ
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgctgggggtgtcccccctgtcgccctgctgcctctggctgctctccctgctctccttg
ggcctgctgccccgcgcagagccctccgttcccctggaggagttctaccccttcggaccg
gagcagggggacgcccagaccccctcccaggacgacgggggctcggggctgctgcagatc
tccgaggcgttccccttcttcggagaccggcacacaggactctacgtgaacaacaacggg
ctggtgtccttcctgagagaggtgtcccagttcacccccgtggcgttccccatcgctggc
gaccgcagggtgctcgctcccttctgggcggacgtggataaccgtcgggctggccaggtg
ttctaccgggagagcagggtccccgaggtgctgaagagggcctccacacacatcaggatg
tacttctcagagttcccagagttcagcgccaactgggtcctcgtggccacctggcaccag
gtggccttctttggagggagcgctcttgtacaggtgaacaccttccaggcagttctcatc
acagatggagacctgtccttcaccatattccagtaccacctggtctcctggaccacgggc
atgcacgctagcagcgggggaaacctggcagggctggggggcatcgctgcccaggcaggt
ttcaacgctggtgacggcaggcgctacttcaacatccctggctccaggacggaggacgtg
gtggacgtggagggcaccaccaacgtgggttaccccgggcgatgggtgtttcgcatcgac
cacgcccaggtggaggtgggcggctgcaacgactccgcctcggtgtgcctccgcctgcgg
ccgtgtgagaatggaggccgctgcatcgatgactgcatcccaggaaagccctccttcacc
tgctcctgcctggccggcttcaccggcagacgctgtcagatagatgtggatgaatgtgcc
tcctacccatgccaaaatgcagggtcttgtgaagaccaggtgaatgccttcagctgtcgc
tgtcctcggggctacacagggacgctgtgtgagacagacatggacgagtgcagagccggg
ccctgcctcaacggagcacgctgtctgcaagccgtcgccaacttcacctgcgtgtgtgag
cgcggctatgctggagcactgtgtgagatagacctggacgagtgtgcgtcccagccgtgt
gtgaatggaggcgtgtgtgcggaccaggtggatggatacacctgcagctgtcctgcccgc
ttcacaggggcacactgtgagacagaactggttgcggtgcaggtgaattcatcctccagt
caagctgaaaatcaaacagcgtcgtgtggaggagaggggtgtgggccaaggcagacctgt
ctctacagcagccctggcagctacaactgcacatgcaaccccggtttctacggtgacaag
tgtgaagaggagtgtctatgccagaatggagggctgtgtttggacttgaatggaacttgt
gaatgcccctctggctacacaggcntgtactgccaacttgaggtgacccagaccccctgc
agtaacagcaggccgtgtccagatggaggtccctgtctggagtatggaggaacctacctg
tgtacctgccatacaggtgtgctggagctggaccccaacccctacccctatgtacagcct
cgatccgtctgtgagtccggcccgtgtgagaatggaggcttctgctacgagcgagacgga
gggtacagctgcgagtgcaaacacggataccgtggcaagaactgtgagaaagtcagaaac
gcctgtgcctcggctccgtgtcgtaacggagcctcctgcaaggaggccgagggcagctac
ctctgtgtgtgctcctacaggttcacagggaagcactgcgaagtgggaaagcctgacccg
tgtgtgtccagcccctgtgtgaacgggggcacctgcttccactacattgggaagtacaag
tgtgagtgtcccgctggcttcagcgggcgccactgtgaggtcagacactccgcccacact
gccgcagggccagactgcggccctcctcccctcctgaagcacgctgaggtccacttctcc
tccagcgctgcgggctccctggccgtgtacacctgccaccctggctacagccccctgccc
agggccacacacagcatctgtgggggccagggggcctggagccagcccccggactgccaa
gaggtggacgagtgtgtatcccagccctgcctgaacggagccacgtgcctggacagggtg
cactcctacctgtgtgcctgtgacaagggcttcaccgggatccactgtcagacagacgta
gacgagtgcctctctgagccgtgtgaacatggtggcacctgtgaggaccagtcgggctcc
ttcctttgccactgtccgcctggacacagcgggcagcactgccagatcgaggaggatggc
tgtgagtccgccccctgtctgaacggaggggtgtgtcgcggataccgtcagacacccctg
tgcgtgtgtaaagagggtttcctaggcgaccgctgccaaacactggagaacccctgcgta
ctgcagccttgtggaaaccgtgggttgtgcaggagtgactggagggggaactacagctgc
gcctgcagagtgggtcacacagggaaggcctgtgagaaagacctgctccccccctccggc
ctgcgcatgctgcgtgtggaggagagtgaggtggagcttctctgggaccagcccgacccc
cagagcctggtcagcgccttcgccgtcacgtacgcccccctggagggcggggccaggaag
acggacttcctggacgggcagcagtccagccacctgctgcagggcctcgcccccggcctc
ctctacaacatctccactttctctgtcaaacgcaacgccaacagcaacgacgtcagccag
ccggctgtggcgctcatacgcacacggccgaggagggtggagcagctgcaggcggtgaat
gtgtcgtcctctcaggtgtggctccgctggctggttcaggccgctcaccacgccgccgtc
agccaggtgcgcgtctctctggtgccccctggtggcagcggggcccgcaccgccctgctc
aacacctccaccaccgagtacaccttcagctccctgctccctggtcagctgtacagcgtg
gacgtgttgacccagagtggggtgaggccagacgagttcccctccaccagtcactccgcc
gggccgctgcaagtctggaccaggccccttccccctcagaacctctccctgtcccatgtg
accaccaactccgcccacatcacctgggaccgcccccctgtgaaccttccagacggcttc
gtggtcaacgtgacccgcggtttgaacacccgcagccgcttcctggccagcgggcgcctg
ggggcgtacaccctgcgggacctcagccccagccagcactaccacctggtgctcaccgcc
gtcaccaacacaggcccgggccagctgcacagcctgccccagcacctggccttcaccacc
ttgccgatggacgatggtctggggaggagggcgaggccggcggggggtgaggggggcgtc
cgaaccctgaccccgtcagagccccaggacctggaggtgacgggggagagagaactgacg
ggggagatgagcagatacacggagctgaaagacagcagaggaagaatcacggcccggttc
tctaacctgccctggaaggttctcaggcaccgcacaaagccagaacctccaattaagtta
gagagaatggaggaaacaaccaataaaatcagtcttgcactagagattcaggaagaagga
tctagaagacagccagagggttcccgggactgccgcggtgttccctgccagaacggggga
acctgtgtgaaggggagcgacgctttcatctgcgactgccccagcggcttcaagggcagg
cagtgtgagctgtactgccagcgggtgcctcacccctgcacccgcctctactcagagacc
aagagcgttcctgtctgggagggaagcgtgtgtcgttacctgtacaagaggacgtataaa
gttcagcaggatgtgtgctatcgagagatttgtgatccactgctccccaagaaaagccct
aacagaagaactaacagacaacaataa
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