Osmerus eperlanus (European smelt): 134011702
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Entry
134011702 CDS
T10927
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134011702 (zfr)
Spliceosome [BR:
oep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134011702 (zfr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
DUF4484
DUF3915
zf-U1
Motif
Other DBs
NCBI-GeneID:
134011702
NCBI-ProteinID:
XP_062307062
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All DBs
Position
25:complement(9830305..9851219)
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AA seq
1114 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTVPTVAVARPAPVAVAAAATAAAYGGYQPAHTAADYGYAQRQQE
VPPPPPPVTSQNYQVTCNGPVFTGRDLPIFQDSYPYVRSTAPAVAYDSKQYYQQPSASAA
VAAAQPSVAESYYQTGTLASPWDSTWKKSLQAPKPGYTQGVTPYTQTQQTRQVTAIKPAT
PSPATSTFSIYPVSSTVQPAAASAVPSYSQSPTYSTNAVTYSGTSYSGYEAAVYSAASTY
YQQQQQQQQQQQQQQKQAVAAVAATAAWTGNTFTKKPPFQNKQLKPKQPPKPPQIHYCDV
CKISCAGPQTYKEHLEGQKHKKKEAALKVSQSSSGGAGGGGGSARGTQNQLRCELCDVSC
TGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSVITQTASSTSAAPSKTSNTTSSSAP
SSSAPSSAVSNSPYLKPVNIVTSGGSAGLGKSTAANSVFSSNTTPAVKKINTPKINFVGG
NKLQTTGKPEEAKVESSKPGPPPLVPQVQESKTETSDSLSALAALQSDVQPVGHDYVEEV
RNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPELQVEVKPSIRARKIQ
EEKMRKQMQKEEFWRRREEEERWRMEMRRYEEDMYWRRMEEEHHWDDRRRLPDGGYPQGP
PGPPGLLGVRPGMPLSQPQGPVPPRRPDSSDDRYVMTKHAAIYPSEDELQDIQKIVSITE
RALKLVSDIITDQDKDKEEDKDKDKEKEKEKEKEKKEFPKDRALKGVMRVGVLAKGLLLR
GDKNVSLVLLCSEKPTKTLLSCIVEHLPKQLTLVTPEKYEVKGSVDEAAIILTSCAESKM
QVTITLTSPVIREENGRDGDVTSGMVKDPADVLERQKCLDALAALRHAKWFQARANGLQS
CVIIIRILRDLCQRVPTWSMFPSWAMELLVEKAISSASGPLSPGDALRRVFECISSGILL
PGGPGLVDPCEKNPTDTLTAMEEQQREDITSSAQFALRLLAFRQIHKVLGMDPLPQMNPR
FNVRNNRKRRRDNSDGNDSFEGEGKKDKKDYDSF
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgcccagtggtgtctttcacttatgtgcccagccggcttggtgaagat
gccaaaatggctaccggcaactattttggttttacccacggtgctgcggcgcagtacagc
cagcagcctgcggccggggtagcctacacccaccccaccacggtggccagctacacggtg
caccaggctccagtggcagcgcacaccgtggctgcggcctacgcccccaccgttcccacg
gtcgctgtcgccaggccggcgcctgtcgccgtggcagccgccgccacggcagcagcgtac
gggggctaccagccggcccacacggccgccgactacggctacgcccagcgccagcaggag
gtccctcctccaccccccccggtcacctcccagaactaccaggttacttgtaatggtccc
gttttcactggcagagacttgccaatattccaggactcttacccctatgtgaggtcgacg
gcgccggccgtggcgtacgacagtaagcagtactaccagcagccctcggcctcggctgct
gtggctgctgctcagccctctgtggctgagtcctactaccagaccggcacgctggcctcg
ccgtgggactccacctggaagaaaagtctccaagcccccaagccaggctacacccaggga
gtaaccccctacacacagacccagcagaccagacaggtcacagccatcaagccagccacc
cccagccccgccacctccaccttctccatctaccccgtgtcctccacggtccagcctgcc
gctgcctccgccgtgccctcatactcccagagccccacctacagcaccaacgccgtcacg
tactccggcacctcctactccggctacgaagcagccgtatactctgctgcctccacctac
taccagcagcagcagcagcaacagcagcagcaacagcagcagcagaagcaagccgtggct
gctgtggcggccacagcggcgtggacaggaaacaccttcaccaagaagccgccgttccag
aacaagcagctgaagcccaaacagcctcccaagcctccgcagatccactactgcgacgtc
tgcaagatcagctgcgccggcccgcagacgtataaggagcacctggagggccagaagcac
aagaaaaaggaggctgccctgaaggtgtcccagagcagcagcgggggggccgggggcggg
gggggctcggcccgggggacccagaaccagctacgctgtgagctctgtgatgtctcctgt
accggcgctgacgcctacgccgcccacatccggggagccaagcaccagaaggtggtgaag
ctgcacaccaagctggggaagcccatcccctccactgagcccagtgtcatcacccagact
gcatcctccacctcagctgcccccagcaagacctccaacaccacctcctcctccgccccc
tcctcctctgccccctcctcagcagtgtctaactccccttacctcaagccggtaaacatc
gtcaccagcggcggctcggctgggttaggcaagagcacggctgcaaacagcgtcttctcc
agcaacaccaccccagccgtcaagaagatcaacactcccaagatcaactttgtggggggg
aacaagctgcagactactgggaaaccagaggaagccaaagtggagtcgtccaagcctggg
ccgcccccattggtccctcaggtccaggagtccaagacggagacttctgattcgttgtcc
gccctagcagcgctgcaaagcgacgtccaaccggttgggcacgactacgtggaagaggtc
cgcaacgatgaggggaaggtgatccgcttccactgcaagctgtgtgaatgtagcttcaat
gatccaaacgccaaggagatgcacttgaaagggaggaggcatcgcctgcagtataagaaa
aaggtgaaccctgagctgcaggtggaggtgaagcccagcatccgagccaggaagatccag
gaggagaagatgcggaaacagatgcagaaggaggagttctggaggaggagggaggaggag
gagcgctggaggatggagatgaggcgctacgaggaggacatgtactggaggcggatggag
gaggagcaccactgggacgaccgacgccggctccctgacggaggctacccccagggccct
ccggggcccccaggcctgctgggggtccgtccaggcatgcccctctcccagccccaggga
cctgtgcctccccgtcgccctgactcctctgacgaccgttacgtgatgacgaagcacgct
gccatctacccctcggaggacgaactgcaggacatccagaagatcgtgtcgatcacagag
cgagccctcaaactggtgtctgacatcatcacggaccaggacaaagacaaagaggaggac
aaggacaaggacaaagagaaggaaaaggagaaggagaaagaaaaaaaagagttccccaaa
gacagggcgctgaagggcgtgatgagggtgggggtgctggccaaggggctgctcctccgc
ggagacaagaacgtcagcctagtgctgctgtgctcagagaaacccaccaagactctgctg
tcctgcatcgtggagcacctgcccaagcagctcacgctggtgacgccagagaagtacgaa
gtgaaggggtctgtcgacgaggctgccatcatcctgacatcctgcgccgagtccaagatg
caagtgaccatcacgctgacttcgcccgtcatccgcgaggagaacggccgggacggagat
gtaacctcgggtatggtgaaagacccagcggacgtcttggaaaggcaaaaatgccttgac
gctctggctgcgctgcgccacgctaagtggttccaggctagagccaatgggctgcagtcc
tgcgtgattataattcgtatcctgcgggatctctgccagagggttcccacctggtcgatg
ttccccagctgggccatggagctgctggttgagaaggccatcagcagcgcctccggaccc
ctcagccctggagatgcactcagacgagtctttgaatgtatttcctccggcatcctgctt
cctggtggcccagggttggtggatccttgtgagaagaatcccacagacaccctgacagcc
atggaggagcagcagagggaagacatcacctcaagtgcccagtttgctcttaggctgttg
gcgttccgtcagatccacaaggtcctgggcatggacccgctgccccagatgaatccgcgc
ttcaacgtccgcaacaaccgcaagcggcgccgcgacaacagcgacggcaacgacagcttc
gagggcgaagggaagaaggacaagaaggactacgacagcttctag
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