Osmerus eperlanus (European smelt): 134011795
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Entry
134011795 CDS
T10927
Symbol
pdzd2
Name
(RefSeq) PDZ domain-containing protein 2 isoform X1
KO
K24058
PDZ domain-containing protein 2
Organism
oep Osmerus eperlanus (European smelt)
Brite
Domain-containing proteins not elsewhere classified [BR:
oep04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
134011795 (pdzd2)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134011795
NCBI-ProteinID:
XP_062307224
LinkDB
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Position
25:complement(9744723..9786262)
Genome browser
AA seq
2282 aa
AA seq
DB search
MAGAGLIQGGRVPQHLQNGGTATLPTRSHTRLSESCQAESPSCETDSQPRESSHIWKMHM
VKGQEGLGIQITGGRGSKRSPHGIVVAHVEEGGATQRDGRLRSGDELLMINGQSLVGLSH
QEAVVILRATEGLVQLVVASREESEVDFHRYPSTSLPDLVSTCAAACPSGRASSRDDIAR
DPFPKESQGTEGLEATREDLTSSSLSLPSHDSLTEQEKLEDKGQGEERGRGEDKGQGEER
GRGEDKGRGEASKACCRSPTPMKFRSRSQGGSSRLESVGEDDELMVENGETGGEMADKPT
RSGRKHSLPQQLDTAGVRQEYQIVKKSARSLSTVQVESPWRLAQPSIISNIVLMKGQGKG
LGFSIVGGQDSARGRMGIFVKTIFPNGAAVADGRLKEGDEILEVNGESLLGLTHQQAIQT
FKQLKKGVVTLTVRTRLRSPSLTPCPTPTLLSRAGSPNSSGGTPVPPAPEEADRRPPAGP
PGPGPKDRIIMEVTLNKELGVGLGIGACCLTLENSAPGIYIHSLAPGSVAKMDGRLSRGD
QVLEVDSESLRHAALSEAYAILSECGPGPVSLIISRHPNPKMSEQEMDDVIARSTHRDSK
EGQASHTLGLPSKSPSPTVKARQGEGSPGLSWTMKRFLEPASRGSLSSEAELSQYFSQEA
PSTSCLAEPLVMGSSEEEGLHQRACCRSVSLEEPSAQQHAFKDVSSVVADGGPAAPPGEA
PPPQPPRQLSSSSLRSPLLRQRRVICYDDEPSDEDDDNAGATATAFRRAVVPGDAWRSRF
PENDSGIVIATSSVEVDEDSQDDRRGGARDSSLESDEGFPLGGDSPFMPIRHFDQEACGG
GVSSSLGVKEPQRPREAGGQLESKRSPKLEHKAVTRVKSMMSIETPNSPQQRGKAEELSQ
VSPHPQGPQSRGSLPRAQQGRKGEAGGEAGAWSTDTVVLRRSEDESFGLDLEIKASPVQV
LVTGLRPGGAAQRESQGKMAVGDEIVAIGDRLLCSSSHQEICELMNNLPVTLVLEVRRPV
SAVDRLSSLMMSSGGCDGPAEETSGLDSDGADDQGSRASPETQLTPAAQPNHSSQIPVTN
IDDFISELNSSPDKSTSAKLPTDTTASDGISLPGHDESTAQAPTRPNLLNFSILDTENKP
PLLPVGKTFLNNYSRNFHPVTGEGAGFSNGVDPEGPGVGSKHMYDMAEDSDSESDSTTTD
NTARAGLQHQEPDTDEEEVELCYSGVQHPSPPGEGTDGTLSPQHPLTSASLDTNDPGLFD
VVQDSAAVSIQNKGSSVVTSRTPLPSAAPRDTQPSGASLPAEPEASSFPKGREESSKDEN
GVPAAGPTQCRVNGATATCDSVVAPAASAQARLSVCSPSPTLGALSVTSLRQDRRGRLNC
NASLNSAPGKSHNAPSSPLSTEPKPSNCSEGRSGVRSPAPLTQRDKEREKVVASLEARTV
QNPPASPSLRTAANLLSSSSAPPSGSRLKLQDKTQKSSTSPKLKGLTIKSKCNHQEQLSP
KPVRAESPILRRTAASPVQSPKLQPKKVALTSGVKTGKQLDKSNSPASPKRCPEKTKTNA
TSLNTTESTTKTKDDPHPSTKDQETQLVSQQKDQETQLVSQQKDQETQLVSQQKDQETQL
VSQQKDQETQLVSQQKDRAETSTTQRTFIEVRLSSTLTPVLPRKETVNSKDSKALGVTLH
NDVNASTDPCSSPNAPSSTPQPENTNSTISYAEATSVEPVPETNLPTNNGPLNSQQKNSS
TTETATSVKSNRSKLCSKTMERRSFSSETGAPADHNPFSVRQRIKSFENLASFDKPVVRC
FEVQSYGQPSKPPLSRRLSGYIAGSISSVDSRSLRRSLSSCMDNFNPAVPTSPTPNKPPS
SLVLINLELPAQSFREAPPPGDEALEMPKVFPEASPLPPQTPPVLRSRQTRGHGGRHGGG
HGGGHGGLSRSRLRELRALSMPELDKLCTEDFASEPGTVTFKTHLEIHPTRSSELASTES
SLQSAAPLGRSTRGAAEADGGSLQGKTNGPQTDQHSWSISLKELAGSPVNQSRLQAVLAS
LTTKSDVLVLLQEAKALSEVKDDTHFVVFTKDEGSGLGFSIAGGMDLEQKAVTVHRVFLT
GVAGTEGTIQRGDHVLSINGSSLEGTTHGEALSCLHQARLKTQALVVTRRSKDWEAHLSP
RRHLSSHSGHTCPKNNTLDTIGAVEVGPGGAMRVELQKTSAGLGFSLEGGKASALGDRPL
HVKRIFNGGAAELSRVIHVGDEVLAINGRSLQGLMHYDAWNVIKAASEGPVQLVIRKPST
SV
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggcggggcttatccaagggggaagggttccccagcacctgcagaacggagga
acagcgacccttcctactcgctcccacacccgcctgtcagagagctgccaagctgaatca
cccagctgtgagacagatagccagcccagggagagcagccacatctggaagatgcacatg
gtgaagggtcaggaggggctgggcatccagatcacgggggggcggggctccaagcgctcg
ccgcacggcattgtggtcgcccacgtggaggagggtggcgccacccagagggacggccgt
ctgaggtcaggtgatgagctgctgatgataaacggtcagtctctggtgggactgtcccac
caggaggccgtggtcatcctgagagccaccgaaggactagtgcagctggtggtggccagc
agggaggagtcggaggtggacttccacaggtacccgtccaccagcctgccggacctggtc
agcacctgtgccgctgcctgcccgagcgggcgagcctcctccagggacgacatcgctagg
gaccccttccccaaggagagccaggggactgagggcctggaggccaccagggaggacctg
acctccagcagcctctctcttcccagccatgactctttgacggagcaggagaagttggag
gataaaggccagggggaggagagaggccggggggaagataaaggccagggggaggagaga
ggccggggggaagataaaggccggggggaggcgtctaaagcctgctgcagaagtccaaca
cccatgaaatttcgcagccggtcacaaggcgggagcagtcggctggagtccgtgggcgag
gacgatgagctgatggtggagaacggtgagacgggcggagagatggccgacaagccgacg
cgcagcggccgcaaacactcccttccccagcagctggacacggccggagtccgccaggag
tatcagatcgtgaagaagtcggctcgctcgctcagcacagttcaagtggaatcaccatgg
cgactggcccaaccttccattatctccaatatcgtcctgatgaaaggacagggcaagggc
ctggggttcagcatcgtgggagggcaggactcggcgcgaggacggatggggatcttcgtc
aagaccatcttcccaaacggagctgcagtggccgacgggcgactgaaggaaggagatgag
atcctggaggtgaatggagagtctctgctgggcctcacccaccagcaggctatccagacc
ttcaagcagctgaaaaagggcgtggtcaccctgacggtgaggactcgtctccgcagcccc
agcctgaccccctgccccacccccaccctgctgagccgtgccggctcccccaactccagc
gggggcacgcccgtcccccccgcccccgaagaggccgaccgcaggccccccgctgggccc
cccggcccgggccccaaggaccgcatcatcatggaggtcacgctcaacaaagagctgggc
gtggggctgggtatcggtgcgtgctgcctaaccctggagaactctgctccaggcatctac
atccacagcttggcccctggctctgtggccaagatggacggcagactcagccgtggagac
caggtcctggaggtggactctgagagcttgcgtcacgctgcgctgagcgaggcctatgcc
atcctgagtgagtgtggacctggaccggtcagtctcatcatcagccgacaccccaacccc
aagatgtcggagcaggagatggatgatgtgatcgcccgctccacacacagggacagtaag
gagggccaggcctctcacactctgggtctcccctccaagagcccgtcccccacggtgaag
gccaggcagggagagggatctcctggcctcagctggaccatgaagaggttcctggagccg
gccagcagggggtccctgagttcggaggcagagctgtcccagtacttctcacaggaagcc
cccagcacttcctgtctggcggaacccttggtgatgggctccagcgaggaggaggggctt
caccagcgggcctgctgcagaagcgtctcattggaagagccctctgcccagcaacacgcg
ttcaaagacgtgtccagcgtggtagcagacgggggcccggcggcccccccgggggaggcc
ccccccccccagccccctcgccagctcagcagctcctccctccgcagccccctcctccgc
cagcgccgcgtcatctgctacgacgacgagcctagcgacgaggatgacgacaacgccggt
gccacggcaaccgcgttccgcagggccgtcgtaccgggcgacgcctggcgctcccgtttc
ccggagaacgactccgggattgtcatcgccacgtcgtccgtggaggtggacgaggacagc
caggacgacaggcgcgggggggcgagggacagctccctagagtcggacgagggctttccc
ctgggcggtgactcccccttcatgccgattcgccactttgaccaggaggcgtgcggcggg
ggcgtgtccagcagtttgggcgtaaaggagccacagcggccccgggaggcgggggggcag
ctggagtcgaagcgctcgcccaaactggagcacaaggccgtgactcgcgtcaagagcatg
atgagcatcgagacgcccaactcgcctcagcagagagggaaagcagaggagctttcccag
gtctctccacacccccagggcccccagtccaggggctcccttccccgggcccagcagggc
aggaagggggaggccgggggggaggccggggcctggagcacggacacggtggtactgagg
aggagcgaggacgagtcgttcggtctggatctggagatcaaggcttctcctgtccaggtg
ctagtgacagggctgaggccaggaggcgctgcccagagggagtcccaggggaagatggcc
gtcggagacgagatcgtggcgatcggggaccgtctcctgtgctcctccagtcatcaggag
atctgtgagctcatgaacaaccttcccgtcacgctcgtcctggaagtcaggagaccagtt
tcagctgtagatcgattatccagtctcatgatgtcgtcaggcggatgtgatggacctgca
gaggagacgagcggtctggacagcgacggggcagacgaccagggaagcagagcctcacct
gagacacaactcacacctgcagcccaacctaaccacagcagtcagatccccgtcaccaac
atagacgacttcatcagcgagctgaactcctcccctgataaaagcacgtctgccaaactc
ccaaccgacactacggcctcagacggcatcagcctgccaggacatgacgaaagcaccgct
caggctccgactcgtccaaatctgctgaatttctcaattttagacacagaaaacaaacct
cccctcctgccagtgggcaaaacattcttaaacaattactccagaaacttccatcccgtc
acaggagagggggcgggcttctctaacggcgtggaccccgaggggccaggcgtcgggtcc
aagcacatgtacgacatggctgaggacagcgattctgaaagcgactccaccaccaccgac
aacacggcgagggcgggcctccagcaccaggaaccggacactgacgaggaggaagtggag
ctctgttacagtggagtccagcatcccagccccccgggagaggggacagacgggacattg
tctccccagcatcccctcacctccgccagcctcgacacgaacgaccccggcctctttgat
gtggtacaagactctgccgcggtctccatccagaacaaaggctcgtctgtcgtgacaagc
cgaacccctctcccttctgcggctccgcgggacactcagccctcaggtgcctctctgccc
gctgagccggaagcttcctccttccctaaggggagggaggagtcttctaaggatgaaaac
ggtgtgccggctgctgggcctacacagtgccgggttaatggtgccacggccacctgcgac
agcgttgtggcacctgctgcatccgctcaggcacggctgagtgtctgcagcccctccccc
acgctgggagccctcagcgtcacgtctctgaggcaggacaggagagggaggctgaactgt
aacgcttcactgaactctgctccggggaaatcacacaacgcgccgtcatcccccctctcg
acggagccgaagccttccaactgcagcgaggggagatcaggcgtcagatcacccgctccg
ctaacgcagagagacaaggagagagagaaagtcgtagcttctcttgaagctagaacagtt
cagaaccctcctgcgagtccttctctcaggacagcagctaaccttctcagtagcagctca
gcgcccccctctggctccagactcaaactacaggacaaaacacaaaaatcgagcacctcg
ccaaaactgaagggcctcactatcaagagtaaatgcaaccatcaggagcagctttctcca
aaaccagtgagagctgaaagtccgattcttaggaggaccgccgcatccccagtccagtcc
cccaaactacaacccaagaaggttgctttgaccagtggcgttaagacgggtaaacagctt
gataagagcaacagccctgcatcacccaaacgctgcccagagaagaccaagaccaacgcc
acgtccttaaacacgactgagtcaaccacaaagacaaaagacgatcctcatcccagtaca
aaggaccaggagacccagctggtctcccagcagaaggaccaggagacccagctggtctcc
cagcagaaggaccaggagacccagctggtctcccagcagaaggaccaggagacccagctg
gtctcccagcagaaggaccaggagacccagctggtctcccagcagaaggacagagcggag
acatcgaccacccagaggactttcatcgaggtacgactctcatctacgttgactcctgtt
ttgccgcggaaggaaaccgtgaattcaaaggactcaaaagctctgggtgttacactgcac
aacgatgtaaacgccagcaccgatccctgttcatcccctaatgctcccagttcgacgcct
cagccagaaaacacaaacagcaccataagctatgcagaggcgacatccgtagaaccagtc
cctgagaccaatctacccacaaacaacgggccgttgaatagtcaacaaaaaaactcaagc
acaacagaaaccgctacgagcgtcaaatcgaacagatccaaactctgttccaagacgatg
gagcgtcgtagtttctcctcagaaactggcgcgcccgcggaccacaaccccttttccgtc
cggcaacggatcaaatcctttgagaacctggccagctttgataagccggtggtcaggtgc
ttcgaggtgcagtcgtacggccagccgtccaagcccccgctcagccggaggctgtcgggg
tacatcgccggctccatcagctccgtggactctcgctctctacgtcggagcctcagctcc
tgcatggacaacttcaaccccgccgttcccacgtcgcctacgcccaacaagcctccgtcg
agcctggtgctcataaacctcgagctgccagcccagagctttcgcgaagcccccccgccc
ggtgacgaagctcttgagatgccgaaagtgttccctgaggcgtccccgcttccaccccag
acgcctccggtgttgagaagcaggcagaccagggggcacggcggcaggcacggcgggggc
cacggcggcgggcacggcggcctctcccgctccaggctgagagaattgagggctctcagc
atgcctgagctggataagctttgtacggaggactttgccagcgaaccagggacagtcacg
tttaaaacccatctggagattcaccccaccaggagctcagagctggcctccacagagagc
agcctgcagtctgcagctcccctgggcaggtcaacccggggagcggcggaggcagatgga
gggtccctccaggggaaaaccaacggaccacaaacagaccaacacagctggtccatcagt
ttgaaggagctggctggctcccctgtgaaccagagcaggctgcaagccgtcctggcctct
ctgaccaccaaatcagatgtgctggtcttgctccaggaagccaaagctctctctgaggtg
aaagatgatactcactttgtggtgttcaccaaagacgagggctcggggctgggcttcagc
atcgccggagggatggacctggaacagaaggctgtcacggtccatcgtgtgttcctgacg
ggggtcgctggaacggaaggtaccattcagcggggggatcacgtcctgtccataaacggc
tccagtctggagggtacgacccacggagaggctctgtcctgcctgcaccaggcccggctg
aagacgcaggccctggtggtgacccgcagaagcaaggactgggaagctcacctgtctcct
agacgacacctgtccagccactcaggacacacctgccccaagaacaacaccctggacacc
ataggagcggtggaggtgggcccaggcggagccatgagggtggagctgcagaagacatct
gctgggctgggcttcagtctggaggggggaaaggcctccgccctcggggaccggccgctc
cacgtcaaacgcatcttcaacggcggcgctgcagagctgtcgagggtgatccacgtgggg
gatgaagtcctggccatcaacggccggtctctacaggggctcatgcactacgatgcctgg
aacgtcatcaaggccgccagcgaaggccccgtccagctcgtcatccgcaaacccagcacc
tctgtatga
DBGET
integrated database retrieval system
