Osmerus eperlanus (European smelt): 134011838
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Entry
134011838 CDS
T10927
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134011838
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Meiosis-specific proteins
Others
134011838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
134011838
NCBI-ProteinID:
XP_062307309
LinkDB
All DBs
Position
25:complement(5538523..5553320)
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AA seq
1655 aa
AA seq
DB search
MDCPKSGLRRSEEECGVSRSIFPAIRYRALDYVCEASTRQKLTMHLFALPMPYNLDNSDL
YPHTGNLPEVTFRKPWIRGNVISTCKLSVSGSVLADLGINGQLADSLENLNVKVTQTKGA
AVDVISSSNPNSQVLDREEAYWFLREATEQGISLCREVFSKSTEVLMGQRLIDEDLLVPE
EVLFVDPLPQFRMHLPTLRAKLARLRTLPVPDPLLSPTGGCLSEDTMLLHCASYEVPHDE
EPESTETFSNTEEVFSKEIVSIEESLLLPVEMDLYTLKNEYCISFPNPRNVLNVTQELMD
DRISWLDLQCADTHPSVDISQFEVPNRPGTSCPYTPDLRSPAGYLMLPTELEMDLPLTPA
PKISLSQMGLSPAKIPAEQLSPVYRNCFVSEREQEEMEKTLWTAERHTQLVLGFLLTEPV
SSGPAVRFQPLTQALTLVTTGQSSSVDMETDPPAVSPALSEGLTGCHDFTESMSSEHARV
IDALRDEMEDFTPLSPSHMDYILNESIDDSARSGPSTKVKAKSMPKTPPPRTPQPHQESQ
SAAGVIAGGTAISSSDDVINKAVSDFTALLSNDKASSANPAGSSVCVGPASQEKSNQLIR
PGRRDDIQPIQGARSPRLTPTPRLTPTSRLIPTPRPCVVDRRRSVPLTGPPEGLDPLSSF
MMLRSLQRAHVPVVPQSCSSPPVPKASHTPQPPVMEQRVDPDAKPAYERPAVTGSEIRVQ
ETTNKIADDKHDSRVIEVQATESQWRAFSELRTLARVCLSRAGDLGLNTAACQDFHSLAP
DHSRFLLKQQEKELSLGPDHDREEMYNQAAVIHVLVTVKDLLLKCDLDTAVDFLSRASDV
CVGQDQDQGLVPLGRRLQVLLFLSQRNQEPNPKILEMQEHITAWLQNRKSHNQASKVLVI
VTSGSDRTRAMIIKGLTQATGQTVSALCPEEGRKKLDKARVLNSLRGSMCVVVCGQHVGA
DFPWQSLSLVVEYDPTPPSPWAPVCRERNICYLTFRTSLHNTNDDPESWSLEQKVPHTVF
VTEGLLNCPLLLHLLESTYNMTVLERSPSQSLERLGGTHHYAVVTVDENTAVVIQEQDEL
CRGRACEDVVLRLTALSLQYSCCWLLIHCPDSQGGGLTSEGFNNLVLIYSSLVLFGLKSE
DLDVKVLIVPEMEDIARWICQIAFRTLMSSKTDPFTYLSREWLSVMPSEEEKCLLAFPCV
NPMVAQLLLSRAPSLRWLLGAPLPQLQELLPEVPLKVVKLFSETTSLYKPTTTPSPPESR
PNVPQTAPVTPSPPWITRDHHQPQHHQAQHHQAQHHQAQHHQPQHHQPQHHQPQHHQAQH
HQPQHHQAQHHQAQHHQPQHHQPQHHQPQHHQAQHHQAQHHQPQHHQPQHHQAQHHQAQH
HQPQHHQPQHHQPQHHQAQHHQPQHHQPQHHPQTDPGALDCFLPSSPCAGSVAGGFHLYD
PVSTTDDHAALQVDLSHPFGSESSSVRQSWRNDNPWGGGEEEEEEESDRERTPEGGRQGE
HNWRGGEPWSRHREVYGSQREPADPGAASNPFQHASSGFRLQEPACPTSPSFFFPHGHSE
HQHPGSSHYLPLTSPRRARRWAGSRGSPYYAGGQRRGGLVGSPGYGNHFRTGQERKRVTA
GGGMFSSALTPVKRGKLSYEKVPGRSDGQTRLRFF
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggattgtcccaagtctggtctgcgaaggtctgaggaagagtgtggcgtctccaggtct
atcttcccagcaatcagatatagagctcttgactatgtttgtgaggcttctaccaggcag
aagttgacgatgcacttgttcgccctcccaatgccctataacctagacaacagtgacctt
tacccccatactggaaacctccctgaggtaaccttcaggaaaccgtggattagagggaat
gtaatatcaacctgcaaactgtcagtcagtggatcggtgcttgctgacttgggaattaat
ggtcaactagcagactcattggaaaatctgaatgtgaaggttacccaaacaaagggggct
gctgtggatgtgatatcgagctccaatcccaactcccaggtgctggacagagaagaggcc
tactggttcctacgagaggctacagaacaggggatttctctctgtcgcgaagtcttcagc
aagagcacagaagtgctgatgggccagagacttatcgacgaggatctcctcgtaccagaa
gaagttctgtttgtcgatcccttgccccagttcaggatgcacctgcccacgctgagggcc
aaactagccaggctccggaccctccctgtgccagaccccctgctcagccccacaggggga
tgcctctcggaggacaccatgctcctgcattgtgcaagttatgaggtacctcatgatgaa
gagccagagagcacagagacattttcaaacactgaggaagtgttcagtaaagaaatagtg
tcgattgaagagtctctgctgctgcctgttgagatggacctctatacgctcaagaacgaa
tattgcatttcttttccaaacccccgcaatgtactgaatgttacccaggagttgatggat
gatcgtatctcgtggttggatctacagtgtgcagacacgcatccgtctgtggatatatct
cagtttgaagtgccaaacaggccaggcacttcctgtccctatacacccgatctcaggtca
ccagcaggctatctgatgcttcctacggagttagagatggacctgcccctgaccccagct
cctaagatcagcctgtcccagatgggtctgtctcccgccaagatcccagctgagcaactg
tctcccgtctataggaattgtttcgtgtccgagagagagcaggaggagatggagaagact
ctgtggacggcagagagacacactcaactagttctgggattcctgctgacagagcctgtg
tcgtctggacctgccgtccgcttccagcccctgacccaggccttgacactagttaccact
ggccagtcgagctctgttgacatggaaacggatccaccagcagtctcaccagcactgtcc
gaagggctgactggttgccatgacttcactgagagcatgagctctgagcatgctcgtgtt
attgatgctttgagggatgagatggaggatttcacacctttgtcccccagccatatggac
tatatcctgaatgagtctattgacgattccgctcgttccgggccatccactaaggtcaaa
gccaagtccatgccgaagactccgcctcctcgaacacctcagcctcaccaggagagccaa
tcagctgcaggcgtgattgcaggaggaacggcaatctcctccagcgatgacgttataaac
aaggctgtgtctgatttcactgcgctcctctccaatgacaaagccagttctgcaaatcca
gctgggagttcagtctgtgttggccctgcctcccaggagaaatccaaccagctaatcaga
cctgggagaagggatgatatccagccgattcagggtgccagatccccccgactcaccccc
acccctaggctcacccccacctctaggctcatccccacccccaggccctgtgtggtggac
cgccgcaggagtgtccctctgactggccctccagagggcctggaccccctgtccagcttc
atgatgctcaggtccctacagagagcccatgtccctgtggtgcctcagagctgctccagc
cccccagttcctaaggcgagccatacaccacagccacctgtgatggaacagagggtggac
ccagatgccaagccagcctatgagagacccgcagtcacaggaagtgaaatcagagtccag
gaaacgaccaataaaatagctgatgacaaacacgacagcagagtgatcgaggttcaagcc
acagagagccagtggcgtgcgttcagcgagctgaggactctggcccgagtgtgcctgtcc
agggctggggacctgggcctcaacacagcagcctgccaggacttccacagcctggctccg
gaccactcccgcttcctcctcaagcagcaggagaaggagctcagcctgggaccggaccac
gaccgcgaggagatgtataaccaggcggctgtgatccatgtcctggtgacggtgaaagat
ctgctgctcaagtgtgacctcgacactgctgtggacttcctgtccagggccagtgatgtg
tgtgtgggccaggaccaggaccagggtctggtgccgctgggccggaggctgcaggttctc
ctgttcctcagccagaggaaccaagaacctaaccccaagatcctggagatgcaggagcac
ataaccgcctggctacagaacagaaagagccacaaccaggcgtccaaagttctggttatt
gtaacgtcagggtcagaccgtactagagccatgatcatcaaaggcctaacccaagccaca
ggtcagactgtatctgctttgtgtcccgaggagggcaggaagaagctggataaagccaga
gtgttgaacagcctgcgcggcagcatgtgtgtggtggtgtgcggccagcacgtgggtgca
gacttcccctggcagagcttgtctctggtggtggagtacgaccccacgccgccctccccc
tgggcgcctgtctgccgggagaggaacatctgctacctgaccttccgcaccagcctccac
aacaccaatgatgatccagagtcttggtcgctggaacagaaggttccccatacggtgttt
gtgacagaaggcctgctgaactgtcccctcctcctgcacctgctggagtccacgtataac
atgaccgtgctggagaggagcccctcccagtcgttagagagactaggagggactcaccac
tacgcagtggtcaccgtggatgagaacactgccgttgtcatccaggagcaggacgagttg
tgtcgaggccgggcctgtgaggatgtggtgttgagactgactgctctgtctctgcagtac
agctgctgctggctcctaatccactgtccagacagccagggaggagggttgactagtgag
ggcttcaacaacctggtcttgatttactcctctctggtcctgtttggcctgaagtctgaa
gatctggatgttaaggtcctgatcgtgccagagatggaggatatagccaggtggatctgc
cagatagccttccgaaccctgatgtccagtaaaactgacccctttacctacctcagtaga
gaatggctgtctgtgatgccctcagaggaagagaagtgtctcctggccttcccctgtgtg
aaccccatggtggcccagctgttgctgagcagggccccgtccctccggtggctcctgggg
gcccctctgccccagctacaggagctgctgcctgaagtccccctcaaagtcgtcaagctg
ttcagcgaaaccacatccctgtacaagccgaccaccaccccctcccctccagagtctcgc
cccaatgttcctcagacagcccccgtaacccccagccccccatggataaccagagaccac
caccagccccaacaccaccaggcccaacaccaccaggcccaacaccaccaggcccaacac
caccagccccaacaccaccagccccaacaccaccagccccaacaccaccaggcccaacac
caccagccccaacaccaccaggcccaacaccaccaggcccaacaccaccagccccaacac
caccagccccaacaccaccagccccaacaccaccaggcccaacaccaccaggcccaacac
caccagccccaacaccaccagccccaacaccaccaggcccaacaccaccaggcccaacac
caccagccccaacaccaccagccccaacaccaccagccccaacaccaccaggcccaacac
caccagccccaacaccaccagccccaacatcacccacaaaccgaccctggagccctggac
tgcttcctccccagctccccctgtgctgggagcgtagcaggagggttccacctgtacgac
cctgtctcaaccacggacgaccatgcagctctccaggtggacttgagccaccccttcggc
tctgagagttccagcgtccggcagagttggcggaacgacaacccctggggggggggggag
gaggaagaggaggaggagagcgacagggagaggactccggaaggaggaagacaaggagaa
cacaactggaggggcggagaaccttggtctagacaccgcgaggtctacggatcccaaaga
gaaccagccgacccaggcgccgcgagcaacccctttcagcacgcctcctccggcttcagg
cttcaggagccagcctgccccaccagtcccagcttcttcttcccccacggccacagcgag
caccagcacccagggagcagccactacctgcccctgacctcccccaggagggccaggcgg
tgggcaggcagccgggggagtccctactacgctggtggtcagcggcgaggcggcctggtg
ggatcccccggatatgggaatcatttcaggacgggccaggagaggaagagggtgacggcc
ggaggaggaatgttcagttcagcgttgacacccgtgaagcgaggcaagctcagctatgag
aaggttccgggacgaagcgatggccaaaccagactgaggtttttctag
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