Osmerus eperlanus (European smelt): 134011891
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Entry
134011891 CDS
T10927
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04137
Mitophagy - animal
oep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134011891 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134011891 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134011891 (vcp)
03009 Ribosome biogenesis [BR:
oep03009
]
134011891 (vcp)
04131 Membrane trafficking [BR:
oep04131
]
134011891 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oep04147
]
134011891 (vcp)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
134011891 (vcp)
Ribosome biogenesis [BR:
oep03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
134011891 (vcp)
Membrane trafficking [BR:
oep04131
]
SNARE
SNARE associated proteins
Others
134011891 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
134011891 (vcp)
Exosome [BR:
oep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134011891 (vcp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
Parvo_NS1
nSTAND3
Mg_chelatase
AAA_17
ATPase_2
AAA_7
AAA_18
ATPase
DUF815
ABC_tran
IstB_IS21
NB-ARC
nSTAND_NTPase5
AAA_24
TsaE
ResIII
AAA_lid_PRS2_C
NACHT
Viral_helicase1
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
134011891
NCBI-ProteinID:
XP_062307388
LinkDB
All DBs
Position
25:5054741..5061474
Genome browser
AA seq
806 aa
AA seq
DB search
MASAADTKNDDLSTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPGLFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEIMQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNISWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILKAN
LRKSPIGKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPTSTAGG
SGPSQGTGGNSGGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcggcagataccaaaaatgatgatctttccaccgcaatactgaaacagaaa
agcagacctaacagactgattgtcgatgagtcaatcaacgaggacaacagcgtggtctcc
ctgtctcaggctaaaatggatgagctgcagctgttccgtggcgacacggtgttgatgaag
gggaagaagaggagggagaccgtgtgcattgtcctgtctgatgacacctgctccgacgag
aaggtgcgcatgaacagggtggtccgcaacaacctgagggtccgccttggtgacgtcatc
agtatccagccatgtccagatgtgaagtacgggaagaggatccatgttctccccatcgac
gacaccgtggagggcatcactggaaacctgtttgaggtctacctcaagccctacttcctt
gaagcctaccggcccattcgcaagggcgacatcttcctggtgagggggggcatgcgagcc
gtggagttcaaggtggtcgagaccgacccctccccctactgcatcgtcgcgccggacacc
gtcatccactgcgagggagagccaatcaggagagaggacgaggaggagtctctgaacgag
gtgggctacgacgacatcgggggcgtgaggaaacagctggcccagatcaaggagatggtg
gagctgccgctcagacaccctgggctgttcaaggccatcggagtcaagccccctcgaggt
atcctgctgtatggaccccctggtacaggaaagaccttgatcgcccgggcggtggccaac
gagaccggagccttcttcttcctcatcaacggccctgagatcatgagcaagctggctgga
gagagcgagagcaacctgaggaaggccttcgaggaggccgagaagaacgcccccgccatc
atcttcatcgacgagctggacgccatcgctcccaagagagagaagacccacggggaggtg
gagaggcgtattgtgtcccagctgctgaccctgatggacggcctgaagcagagggctcac
gtcatcgtcatggcagccaccaacagacccaacagcatcgaccccgccctcaggagattt
gggcggtttgacagggaggtggacattggcatcccagatgccacaggcagactggagatc
atgcagatccacaccaagaacatgaagctggctgacgatgtggacctggagcaggtggcc
aacgagacccacggccacgtgggcgccgacctggcggcgctgtgctccgaggcggcgctg
caggccatcaggaagaagatggacctgatcgacctggaggacgagaccatcgacgccgag
gtcatgaactccctggccgtcaccatggacgacttcaggtgggcgctgagccagagcaac
ccatcagctctgagggagacggtggtggaggtgcccaacatctcctgggaggacatcgga
gggctggacgacgtcaagagagagctgcaggagctggtccagtacccagtggagcacccc
gacaagttcctgaagttcggcatgaccccgtccaagggcgtgctgttctacggccccccc
ggctgcggcaagaccctgctggccaaggccatcgccaacgagtgccaggccaacttcatc
tccatcaaggggcccgagctgctcaccatgtggttcggggagtccgaggccaacgtcagg
gagatctttgacaaggcccggcaggccgccccctgcgtcctcttcttcgacgagctcgac
tccatcgccaaggcccgcggcggcaacgtgggcgacggcggcggcgcggccgaccgcgtc
atcaaccagatcctgacggagatggacggcatgtccagcaagaagaacgtgttcatcatc
ggcgccaccaacaggcccgacatcatcgacccggccatccttcgccccgggcgcctggac
cagctcatctacatccccctgcccgacgagaagagccggatcaacatcctcaaggccaac
ctccgcaagagccccatcggcaaggacgtggacctggacttcctggccaagatgaccaat
ggcttctccggcgctgacctgacggagatctgccagcgggcgtgtaagctggccatcaga
gagagcattgagaacgagatcaggagggagagggagaggcagaccaacccctctgccatg
gaggtggaggaggacgaccccgtcccagagatcaggaaggaccactttgaggaggccatg
cgcttcgcccgccgctccgtcagcgacaacgacatccgcaaatacgagatgttcgcccag
acgctgcagcagagcaggggcttcggcagcttcaggtttcccaccagcactgcggggggc
agcggtcccagccagggcacaggaggcaacagtggagggccggtcttcaacgaggacaac
gacgacgacctgtacggatag
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integrated database retrieval system
