Osmerus eperlanus (European smelt): 134011942
Help
Entry
134011942 CDS
T10927
Symbol
rfx1a
Name
(RefSeq) MHC class II regulatory factor RFX1a isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134011942 (rfx1a)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Other basic domains
RF-X
134011942 (rfx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
134011942
NCBI-ProteinID:
XP_062307482
LinkDB
All DBs
Position
2:9016241..9027725
Genome browser
AA seq
903 aa
AA seq
DB search
MATSGYVGELQPTSQPQGTGVSVTTGQTSTSDPSTPQFLAEIQTTVTTQPTAAPAGQTTP
PDQAPPTPSQNTTPPAQTQYVTAEIQSSPTQSGNSQSTPQYIVVTVTEGSLHSSDSVSDS
SPPPAVVQTGVPTQVVQQVQTAQQRSVVQTTSQIAKTEPGTQLNVTNLQPVHLTQEVQQQ
LQQVPVQHVYTNQVQYVEGGDTSYTTSTIRSGSFSYTDTPLYTQTTAAPYYEAPPSSGSP
ATTPGTPLTVSVTTGSAGVSMFVAGTGQIVANPTPTAGGGATVVTTGGTANGSGEGAGAN
GGGGSYVIQGGYMLGGGGGGSNSQSYSHNARASPATVSITEGEESSVPSADKKSSCVSLP
PGQVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRR
LGTRGNSKYHYYGLRIKASSSLIRLMEDQQHLAMRQQPFSQKQRLKPVQKVEGMTNGTAA
GSGQQQQGAGLSDISAQVQQYQQFLDASRALPEFPDIDLQGKALPEDIEPEHIKGFQLLY
REHCEAILDVMINLQFTLVETLWKTFWRFSQNQAGDSVTLAVHDESEKRLPKSCLVILCK
YDPVLRWSRDCDNTLYQALVEILIPDVLRPIPSALTQAIRNFAKSLESWLTNAMMNIPEE
MVRIKVTSASAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASW
VCRCEDRVVQRLEQDFKLTLQQQNSLEQWASWLDGVVSQVLKPYQHSAAFPKAAKLFLLK
WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFASL
GRSLNPLDPDKEEEEEEEEESDDESQELSLPSDGAGLGEESLEPPAKLARTDQRVLFSTG
STD
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggccacatcaggctacgtgggggagttgcagccaaccagccagcctcaaggtacaggt
gtaagtgtgacaacgggacagacatccacctcagacccctccacaccgcagttcctggct
gagattcagaccacagtgaccacccagcctacagcagcacctgcaggacaaaccactcct
cctgaccaggcccctcccacaccctctcagaacaccactccgcccgctcagactcagtat
gtgactgcagagatccagagttcccccacgcagtctgggaattcccagagcacacctcag
tacatcgttgtcacggtcacagaggggtctctccactccagtgactcagtgtctgactcc
agcccccctccagccgtggtgcagactggggttcccactcaggttgtgcagcaggttcag
acagcccaacagaggtcagtggtacagaccacctctcagatagccaagactgaacctggc
acccagctcaatgtcaccaacctgcagcctgtccacctgacccaggaggtgcagcagcag
ttgcagcaggttccagtacagcatgtgtacaccaaccaggttcaatatgtggaaggagga
gacaccagctacaccaccagtaccattcgttctggcagcttctcctacacagacacccct
ctgtacacccagaccactgctgccccctactacgaagcccctccctcctccgggtcaccg
gccaccaccccagggaccccattgactgtgtccgtgacaacgggctcagcgggtgtgtcc
atgttcgtggcagggacgggccagatcgtggctaaccctacccccaccgccgggggaggg
gccacggtggtgaccactggaggcacggccaacgggtccggggaaggggcaggggccaac
ggtggcgggggcagctatgtgatccagggggggtacatgctggggggaggcggtgggggc
agcaacagtcagagctactcacacaacgcccgtgcgtctcctgccactgtgagtattaca
gagggagaggagagtagcgtgccgtcggcagacaaaaagtcctcctgtgtctctctgcct
cctggccaggtacagtggttactggataactacgagacagcagaaggagtcagcctgcct
cgctccaccctctactgccactacctgttgcactgccaggagcagaaactggagccggtc
aacgccgcctcgttcggcaaactcatccgctcggtcttcatggggctgcggacgcggcgt
ctgggaacacggggtaattctaagtaccactactacggcctgaggatcaaggccagctcg
tctctcatcagactgatggaggaccagcagcacctggccatgaggcagcagcctttctcc
cagaaacagaggttgaagccggtgcagaaggtggaggggatgaccaatggcacggcagca
ggctcaggccagcagcagcagggggcggggctctctgacatcagcgcccaagtgcagcag
taccagcagttcctggatgcatcgcgagcgctcccagagttccctgacatcgatctgcag
gggaaagccctgccggaggacatagagccagagcacatcaaaggcttccagctgctctat
cgggaacactgtgaggccatcctggatgtgatgatcaatctgcagttcaccctggtggag
accttgtggaagaccttctggaggttcagccagaaccaggctggagactcagtcacactt
gccgtgcatgacgagtcagagaagcgtctgcccaagtcctgcctggtgatcctgtgtaag
tatgacccggtgctgcgctggagccgtgactgtgacaacacgctgtaccaggccctggtg
gagatcctcatccctgacgtgctgcgccccatccccagtgccttaactcaagcaatccgc
aactttgccaagagtctggaaagctggctgaccaatgctatgatgaacatcccagaggag
atggtccgcatcaaggtgacctctgccagtgcgttcgcccagaccctgcggaggtacacc
tccctcaaccacctggcccaggcggcccgtgccgttctccagaacaccgcccagatcaac
cagatgctcagcgacctcaaccgcgtggactttgccaatgtgcaggagcaggcatcatgg
gtgtgcaggtgtgaggaccgcgtggtgcagcggttggagcaggacttcaagctgaccctg
cagcagcagaactccctggagcagtgggcttcctggctggacggtgtggtctcccaggtc
ctaaagccctaccagcacagcgccgccttccccaaggccgccaaactctttctgctgaaa
tggtccttctacagctccatggtgatcagagacctgaccctgcgtagtgctgccagcttt
ggctcctttcacctgatccggctgctctacgacgagtacatgtactacctgatagagcac
agggtggcccaggccaagggagagacacccatcgctgtcatgggcgagtttgccagtctg
ggcaggagtttgaaccccttggatcctgacaaagaagaggaagaggaggaggaagaggag
agcgacgatgagagccaggagctgtctctcccctctgacggggcggggctgggggaggag
tcactggagcccccagctaagctggccagaaccgaccagagagtgctcttctccacaggc
tcgacagactga
DBGET
integrated database retrieval system
