Osmerus eperlanus (European smelt): 134011975
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Entry
134011975 CDS
T10927
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134011975 (tfip11)
Spliceosome [BR:
oep03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
134011975 (tfip11)
Other components
Complex C specific factors
134011975 (tfip11)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
134011975
NCBI-ProteinID:
XP_062307541
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All DBs
Position
25:5009004..5014391
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AA seq
840 aa
AA seq
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MSMSHLYGKRAGEEEDGVEFESFEVTDWDLANEFNPERRRHKQTKEDTIYGVWAERDSDE
ERPSFGGKRSKDYTAPVSFVSAGLRKPAAEEKTQQPREGGSSDYSDDDDDPPPAPAPPPS
RVTAPKKLQTGGNFRVNQSQRTFAAGIRAGQDIGTWEKHTRGIGQKLLQKMGYVQGKGLG
KNAQGIVTPIEAKVRKGKGAVGAYGNERTQQSLQDFPVVDSEEEEEKEFQKELGQWRRDP
GGAGGKKKPKYSYRTVEELKAKGKLVGRSTHTPAGELAQVKVIDMTGREQKVYYSYSQMT
NKHSVPEEAPLSMSARDQKPSGFALPELEHNLQLLIDLTEQDILQSARRLQHERDVVVSL
SHESAGLETRLEVERGSIRRLEAVLGLVERFQGGETAPGDGPSLQECARIFETLQTEYYE
EYKTMGLGDLAVAVVHPLLREKLRTWDPLKDSSYGLEEVGQWRAILESGQFHSSTPETHM
DPYHRLLWEVWMPVLRVCVSSWQPRMVGPMVDCVEVWAPLLPLWTLDHLLEQLIFPRLQR
EVDNWNPLTDTVPIHSWLHPWLPLLQSRLEPLYPPIRSKLANALQRWHPSDASARLILQP
WKDVFTPGAWEAFLVKNIIPKLALCLGELVINPHQQQMEPFHWVMDWEGMLSPSSLVSLM
DKHFFPKWLQVLCSWLSNSPNYEEITKWYLGWKTMFSDAVLAQPLVKDKFNEALDIMNRA
VSTGMGGYMQPGARENIAYLTQTERRKDFQYEALQERRDAESVAQRGIGVSLPTNFKDLI
QTKAEENNIVFMPLVAKRHEGKQLYTFGRIIIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccatctctatgggaagagagcaggggaggaggaggacggggttgagttt
gagagcttcgaggtgacagattgggacctggccaatgaatttaacccagagcgccgcaga
cataaacagaccaaggaggacaccatctacggagtctgggctgagagagactccgatgag
gagagacccagctttgggggaaagaggtccaaggactacaccgccccggtgagttttgtg
agtgcggggctgaggaagcctgcggctgaggagaagacccagcagccgagagagggagga
agctcggattactctgacgacgatgacgacccgccccccgcgccggcccctcccccctcc
cgtgtcaccgcccccaagaaactgcagacgggaggtaacttccgagtcaaccaatcccag
aggaccttcgcggccggtatccgggcaggacaggacataggcacctgggaaaaacacacg
cgcgggattggacagaaactcctccagaagatgggatatgtacaggggaaaggacttggc
aaaaacgcccaaggtatcgtgacccccattgaggccaaggtccggaaggggaagggggca
gtgggtgcctacggcaacgagcgaacccagcagagccttcaggacttccctgtagtggac
tctgaggaggaggaggagaaggagttccagaaggagctcggccaatggcgtcgagatcca
ggaggcgcagggggcaagaagaagcccaagtactcctacaggactgtggaggagctgaag
gctaaaggcaagctggtcggacggagcacacacacccccgccggagagctggcccaagtg
aaggtgatcgacatgaccggcagggagcagaaggtgtactacagctacagtcagatgacc
aacaagcacagtgttcccgaggaggctccgctgagcatgtccgcccgcgaccagaagccc
tccggcttcgctctccccgagctggagcacaacctgcagctgctcatcgacctgacggag
caggacatcctgcagtcggcgaggcgcctgcagcacgagcgggacgtggtggtgtccctg
agccacgagtcggcgggcctcgagacgcgcctggaggtggagcgcggaagcatccggagg
ctggaggccgtgctggggctggtggagcgcttccagggcggggagacggcgcctggggac
ggacccagcctccaggagtgcgcacgcatctttgagaccctgcagacagagtactacgag
gagtataagaccatgggcctgggagacctggcggtggccgtggtccaccccctgctcaga
gagaagctccgcacctgggaccctctgaaggacagttcctatgggctggaggaggtaggt
cagtggagagccattctagagtctggacagttccactccagtacccctgagacacatatg
gatccctaccacaggctgttgtgggaggtgtggatgccggtgctgagggtgtgtgtgtcg
agctggcagccccgtatggtgggccccatggtggactgtgtggaggtgtgggcccccctc
ctccctctctggacactggatcatctgctggaacagctcatcttcccccggctgcagaga
gaggtggacaactggaaccctttgacggacacggtgcccattcactcctggctccacccc
tggttgcctctgctccaatcgcggctggagcctctgtacccgcccatccgcagtaaactg
gccaatgccctgcagcgctggcatccgagcgacgcctcggcccgcctcatcctgcagccc
tggaaggacgtgttcacgccgggcgcctgggaggccttcctggtcaaaaacatcatccct
aaactggctctgtgtctgggggagctggtgatcaaccctcaccagcagcagatggagccc
ttccactgggtgatggactgggagggcatgctgtctccctccagcctggtctctctgatg
gacaaacacttcttccccaagtggctacaggtgctgtgttcgtggctcagtaacagccct
aactacgaggagatcactaagtggtacctgggctggaagaccatgttcagtgatgcggtg
ttggcccagccgctggtcaaggacaagttcaacgaagctctggacatcatgaaccgtgcg
gtgtccacgggcatgggcggttacatgcagccaggcgccagggagaacatcgcctacctc
acccagacggagaggcggaaggacttccagtacgaggccctgcaggagcgccgcgacgcc
gagagcgtggcccagaggggcattggcgtcagcctgcccaccaacttcaaagacctgatc
cagaccaaggccgaggagaacaacatcgtcttcatgccgctggtggccaagcggcacgag
ggcaagcagctgtacacgttcgggcgcatcatcatctacatcgaccgaggggtggtgttc
gtccagggggagaagacctgggtgcccacgtcgctccagagtctgatcgacatggccaag
tga
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