Osmerus eperlanus (European smelt): 134012005
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Entry
134012005 CDS
T10927
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
134012005 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oep03400
]
134012005 (polb)
Enzymes [BR:
oep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
134012005 (polb)
DNA repair and recombination proteins [BR:
oep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
134012005 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
134012005 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_2
Cdd1
DUF4806
Motif
Other DBs
NCBI-GeneID:
134012005
NCBI-ProteinID:
XP_062307583
LinkDB
All DBs
Position
25:complement(4813947..4818084)
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AA seq
337 aa
AA seq
DB search
MSKRKAPQESLNEGITDFLVELANYERNVNRAVHKYNAYRKAASVISKYPQKIKSGTEAK
KLDGVGAKIAEKIDEFLQTGTLRKLDKIRNDDTSSSINFLTRVTGIGPAAARKFFDEGVK
TLEDLKNIEHKLNHHQQIGLKYFEEFEKRIPRAEMQTMEALILKELDKVGTDYIGTICGS
YRRGAESSGDIDILLTHPDYTSESEKQAKLLHDVVDHLESVGFVTDTLSKGDTKFMGVCQ
LQPSDEEEEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTI
RPLGVTGMAGEPLLVDSEKDIFDYIQWKYKEPKERSQ
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaggaaagcgccacaggaatccctaaatgaaggaattacagactttcttgtt
gaactggccaactatgagagaaatgtcaacagagctgtccacaagtacaacgcatacagg
aaagcagcatctgttatctcaaagtacccccagaagattaaaagtggcacagaggccaag
aaattggacggtgttggcgctaaaattgcagagaagattgatgagtttctacaaacaggc
accctcaggaaactggacaagattcgtaatgatgatacaagttcttccatcaacttcctt
accagagtgactggtattgggcctgctgcagccaggaagttctttgacgagggagtcaag
accctggaagacctgaagaacattgagcacaagcttaaccatcatcagcagattgggctc
aagtactttgaggagtttgaaaaaagaattccacgagcagagatgcagacgatggaagcg
cttatcctgaaggaactggacaaagttggcaccgactacatcggcacaatctgtgggagt
tacaggagaggtgcagagtccagtggggatattgacatcctcctaacccaccctgattat
acttcagagtctgagaagcaggccaaactcctccatgacgtggtggaccacctggagtcc
gtcgggttcgtgaccgacaccctgtccaaaggggacaccaagttcatgggggtgtgccag
ctgcagccgagcgacgaagaggaggaagaagagtaccttcacaggcgcattgacatcagg
ttaattcctaaggaccagtactactgtggcgttctgtatttcactgggagcgacatcttc
aacaagaacatgcgaacccatgctctggagaagggcttcaccctcaacgagtacaccatc
cggccactgggggtcactggcatggcaggggagcctctgttggtggactctgagaaggac
atctttgactacatccagtggaaatacaaagagccaaaagaacgcagccagtga
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integrated database retrieval system